Acromyrmex echinatior (Panamanian leafcutter ant): 105147844
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Entry
105147844 CDS
T03917
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec04512
ECM-receptor interaction
aec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105147844
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105147844
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aec00535
]
105147844
Proteoglycans [BR:
aec00535
]
Extracellular matrix (ECM) proteoglycans
Others
105147844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
105147844
NCBI-ProteinID:
XP_011057451
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MYLQTWIFAIAHITYAQYVVAKRGLCNGYKSGVDDLQTFEFISKLKLDLLDAHYSGMTKV
RGSNRMQTAYRLEKGTDVTLPTKDIIPSGLPEEFSLVYTLRARKSPKYPWHVIKIANMNG
DAQFLITMNSRKRTLDFSSIDHEGELQTISFVNDRVFDKGWHKVNFGVFKDKLVLNIDCE
FVGVEDLKPRGSIKIDGDLSIAKMNNSKITVPIDLQWMVLTCDPTRDERETCKELPTKTV
EPAPLQIKPTCNTICPQGPPGFNGSNGFPGPPGPPGAPGPIGISGSTGFPGQSGPPGEQG
RIGAPGNIGVRGFPGLQGSKGSIGPAGPPGLLGSPGRKGERGDMGFPGLKGDQGPRGFPG
SSGNPGDFSHESSEYKGEKGAKGERGDNGIQGQPGEKGESGDRGYPGLDGSRGRDGASGL
PGFPGPPGLPGPPGPKGNTIYTNTSNIPGAQGPRGIIGPPGPSGSPGPSGPPGLPGLPGS
PGQIGPKGDIGERGRDGTPGLTDNNVISGLPGPEGPIGLPGDDGLPGEKGEIGPMGPSGP
SGNPGKDGYPGLPGPQGLPGPHGEPGSSGPRGLDGLAGKPGPPGSDGKSGQKGNKGQKGE
QGLAGPRGLPGNSGSMGSPGAPGVPGLEGRPGQSGPSGPIGPSGPPGPPGLPIANSNFGN
IGRPGLEGPRGPPGPPGIPGERGTPGERGLEGQIGPPGEKMTEMAALMQGLPGPPGRGRP
GRPGSPGPQGRPERLKELTEGLRGLPGLPGPARHGRPGRAGKRGIPGDPGPPGLPGDRGF
VGLPGPQGPIGPQGLPGERGEKGDRGPEGIGLEGPPGLTGLPGPPGNDGVGLPGRQGDRG
EPGRPGVPGARGPPGTQGPPGYCEFCNYPSSNYLHNRGNEKGP
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgcaaacatggatatttgcaatagcgcacataacttatgcccaatacgtcgtc
gccaaacgtgggctatgcaacggctacaagtctggcgtagacgatcttcagacattcgag
tttatcagcaagctgaaattggatctgttggacgcgcattacagtggcatgacgaaggtc
cgaggcagtaatcgcatgcagacggcataccggctggagaaaggcactgatgtcaccctc
ccgacgaaagacatcatacccagtggacttccagaagagttctcgttagtgtacacgctg
agagctaggaaatcaccgaagtatccttggcatgtcattaagattgcgaacatgaacggt
gacgctcagtttctcatcacaatgaattctaggaagcgaacactggatttttcatcgatc
gaccacgagggagaattacagacgatctcttttgtaaatgatcgcgtgttcgacaagggt
tggcacaaggtaaacttcggggtgttcaaggataaactagtccttaacatcgattgcgaa
ttcgttggcgtggaagatttaaaaccacgcggttcgattaaaatcgacggggatctgtcg
atagctaaaatgaacaatagtaagattactgtgccgattgacttgcaatggatggtttta
acttgcgatccaacgagagacgagagagaaacgtgtaaagagctacctacgaaaaccgta
gaacctgctccgcttcaaataaaacccacttgcaatacgatctgtccgcaaggaccacct
ggatttaatggttccaatggatttcccggtccacctggaccacccggagcaccggggcca
attggtatatcaggttcaactggatttccagggcaatcggggccgccgggtgaacaagga
aggataggagctccaggtaacattggcgttagaggttttccaggattgcaaggttctaaa
ggatcgataggacccgcaggaccaccgggcttactaggatcaccaggccgaaagggtgaa
agaggcgatatgggatttccgggtctgaaaggagatcagggtcctcgagggtttccgggt
tcgtcagggaatccgggtgatttttcacatgaatcgtcagaatacaagggcgaaaaagga
gccaaaggtgaacgaggagacaatggtattcaaggacagccgggtgaaaaaggcgaatct
ggagacagaggatatccgggattagatggatcccgcggtcgtgacggagcatcaggtctt
cctggttttccgggacctcctggtcttccgggaccccctggaccgaaaggcaacactata
tatacgaatacgtctaatattccaggagcacaaggtcctcgtggtataataggaccacca
ggaccatcaggctcaccaggaccatcaggcccaccaggactgccaggattgcctggatct
ccgggccaaataggtccaaagggcgatatcggggaacgtggtcgagatggcacaccggga
ttaacggataataacgtcatatcaggattacctggtcccgagggacctattgggcttcct
ggtgatgatggtctcccaggtgaaaaaggagaaattggaccaatgggtccttcaggacca
tctggaaatccgggaaaggatggatatccaggattaccaggaccacaaggacttccaggg
ccacacggagaaccggggtcttcaggacctcgaggtttagatgggctcgcaggaaaacca
gggccaccaggatccgatgggaaatcaggtcaaaagggtaacaaaggacaaaaaggtgaa
caaggtcttgccggacctcgtggattaccagggaattcgggctcaatgggctcaccaggc
gcaccaggtgtaccaggcttagaaggaagacccggtcaatccggtccttcgggaccaata
ggaccatcaggacctccaggccctcctggtcttccaattgcgaacagcaattttggtaac
attggtaggcccggtctcgagggacctagaggtccaccaggtcctccaggcataccaggt
gaaaggggaactcctggagaacgaggattagaaggtcagataggaccacctggagaaaag
atgaccgaaatggcagcgttaatgcaaggtctacctggcccgcctggtcgaggccgtccg
ggccgtcctggatcccctggacctcaaggtcgcccagagagactgaaagaattaacagag
ggtctacgagggctacccggattaccgggaccggctcgacacggccgtcccggtcgagcc
ggaaagcggggcattccaggcgatccaggcccgccaggtttgccgggagatcgtggattc
gttggtttacctggtccgcagggtcccatcggtccacaggggctacctggcgaacgtgga
gaaaagggggacagaggtcccgagggaatcggcttagaaggaccgcctggtctaacaggt
ttaccagggcctcctggtaatgacggcgtcggtttgcccggaaggcagggagacagaggt
gaaccaggcagaccaggtgttcctggcgcgagaggaccaccaggaacgcaaggaccaccc
ggatattgcgaattctgtaattatcctagcagcaattacttgcacaatcgtggcaacgag
aaaggtccttaa
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