Acromyrmex echinatior (Panamanian leafcutter ant): 105148984
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Entry
105148984 CDS
T03917
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03020
RNA polymerase
aec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105148984
09124 Replication and repair
03420 Nucleotide excision repair
105148984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aec03021
]
105148984
03400 DNA repair and recombination proteins [BR:
aec03400
]
105148984
Enzymes [BR:
aec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105148984
Transcription machinery [BR:
aec03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105148984
DNA repair and recombination proteins [BR:
aec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105148984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
105148984
NCBI-ProteinID:
XP_011059388
UniProt:
F4WT97
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MSNIFGLEDDQYDEEDKEEISSKLWQEACWILINAYFDEKGLVRQQLDSFDEFIEMSVQR
IVEDSPQIELQAEAQHTTGEIEKPVKHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRN
LTYSAPLYVDITKTIEKDGEDPVETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNEC
PLDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKAEIRSCLEHSSRPTSTLWI
NMMAKSGASIKKSAIGQRIIAIIPYIKQEIPIMVVFRALGFVADRDILEHIIYDFDDPEM
MEMVKPSLDEAFVIQEQNVALNFIGTRGAKPGVTKEKRIKYAREILQKEMLPHVGISDFC
ETKKAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRL
YAQKFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAS
TLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQ
PSPILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDII
VSEVSMVRDIRDREIRIYTDAGRISRPLLIVEGQNLLLQTRHINMLKERDYNNDGWQELV
GSGVVEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDH
NQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGI
NSIVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKESESKKIGDQEEQFEKPSRLT
CSGMRNAIYDKLDDDGIIAPGIRVSGDDVIIGKTITLPETDDELDSTTKRFTKRDASTFL
RNSETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPF
SSEGLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQ
EYGYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPME
GRARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFE
CKGCKNKTQIAQIRLPYAAKLLFQELMAMNIAPRLMTL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatattttcggtcttgaagacgatcaatatgatgaggaagataaagaagaaatc
tcatcaaaactttggcaagaagcctgctggatcctcatcaacgcatactttgacgaaaaa
ggacttgtacgacaacaactggatagtttcgatgaatttattgaaatgtccgttcagcgt
attgtggaggattcaccacaaattgaactacaggcggaggcgcagcacaccacaggcgag
atagaaaagcctgtgaagcatttgttgaaatttgagcaaatttacctgtcgaagccaact
cattgggaaaaagatggtgcaccatctcctatgatgcccaatgaagctagattgagaaat
ttaacatattctgcgccattgtatgtggatatcactaagacgatcgagaaagatggtgaa
gacccagttgagacgcaacatcaaaaaacatttataggcaaaattccgattatgttgaga
tcaaagtattgtttactcgccggcttatctgatcgtgatttgacggaattgaacgaatgc
ccgttggatcctggcggatattttattattaatggttcggagaaagtccttatagctcag
gaaaaaatggcgacgaacaccgtctatgtattcagcatgaaagacggtaagtatgcttac
aaggcggaaatacgctcatgcttggaacacagctcccgtccaacttcgactctatggatc
aatatgatggccaagagcggtgccagtattaaaaaatctgctataggccaacgcattatc
gccattattccttacattaagcaggaaatccccataatggtggtttttcgagcactcgga
tttgtggctgatcgcgatatcctcgaacatattatttacgatttcgacgaccctgagatg
atggaaatggtgaagccctccttagatgaagctttcgtcatacaggaacagaacgttgct
ttgaattttatcggtactagaggcgctaagccaggagtaacaaaggagaagcgaattaaa
tacgcccgagaaatcttacaaaaggaaatgctgcctcacgttggcataagcgatttctgt
gaaaccaagaaggcatatttccttggttacatggtccatagattattgtcggcatctcta
ggacgaagggaattggacgatcgcgatcattacggtaataagagattggacttggctggg
cctctgttagcatttttattccgaggtttgttcaagaatctaatgaaggaggtacgtctg
tacgcacagaagttcatagatcgagggaaagactttaatctcgagctggccatcaagaca
aaaattataacggacggtctgagatactcgcttgccactggtaactggggcgaccagaag
aaggcacatcaggcaagagcaggtgtgtcacaggtattgaataggttgactttcgcgtcg
acactgtcgcatctaagacgagtgaattcgcctattggaagagatggtaaacttgccaaa
ccacgtcaattgcacaatacgttatggggtatgctttgccctgcggagactcctgaaggt
gccgctgtaggattagtgaaaaatctagccctgatggcgtatataagtgttggatcgcag
ccatctcctattctggaattcttggaggaatggtccatggagaatctggaagagatagca
ccgagcgcaatcgccgatgctacaaagatattcgtgaacggatgttgggtcggcatccac
cgagatccagatcaattgatggccactttacgcaaattgagaagacagatggatattatc
gtgtcggaagtatcaatggttcgcgacattagagaccgtgagataaggatatacacggac
gctggtaggatcagcagacctttgctcatagtggaaggtcaaaatttattactgcagaca
agacatattaatatgttgaaggaaagagattacaacaatgatgggtggcaagaattggta
ggtagcggagtagtggaatatatagataccctggaggaagaaactgttatgatagctatg
tcacctgatgatctcagacaagagaaagagtacgcatattgtacgacgtatacgcactgc
gagattcatccagcgatgattttgggtgtgtgtgcttccattataccgttccccgatcat
aatcagagtcctaggaacacttatcagagcgctatgggtaaacaagctatgggtgtatac
attacaaactttcacgtgcgcatggacactttggctcatgtactgtattatcctcataaa
ccattggttacaacaagatctatggaatatcttagatttcgcgaattaccggccggtatt
aacagcattgttgcaatcctgtgttacacgggatacaatcaagaggacagcgttatcctg
aatgcgagtgccgttgagaggggtttcttcagatcagtgttttatcgttcttataaggaa
tccgagtcaaagaagattggcgatcaggaggaacaattcgagaaaccctcgcgcttaact
tgttctggaatgcgcaatgctatatatgacaaattggacgatgacgggatcattgcgcct
ggaattcgagtatctggtgacgatgtaatcataggaaaaacgataaccttaccagaaacg
gatgacgagctggacagtacaacaaaacgttttacgaaacgtgatgcgtcgactttcttg
cgaaacagtgagaccggtattgttgatcaggtgatgttgacgttgaatagcgaaggatat
aaattctgcaagatccgagtgcgcagtgtacgtattccgcaaatcggcgacaaatttgcg
tcgcgtcacggacaaaagggtacatgcggaattcagtacagacaagaagacatgcctttc
tcttccgaaggtcttacacccgacattattatcaatcctcatgctatcccttctcgtatg
actattggtcacttgattgaatgcattcaagggaaagtttctgccaataaaggagagatt
ggtgacgctactccgtttaacgacgctgtgaatgtgcaaaagatttccactcttttgcaa
gaatatggttatcatttgcgaggaaatgaagtaatgtataacggacatacaggtcgtaaa
atcaacgcgcaagtctttttaggaccgacgtattatcaacgtttaaagcatatggtagac
gacaagatccatagtagagcaagaggacctgtgcaaattttagttagacaacctatggag
ggacgagcgagggatggtggacttcgttttggagagatggaacgagattgccaaatttct
catggcgcagcgcaatttctacgagaacgtttgttcgaagtatcggatccatatagaatt
cacatatgtaatttctgtggtttaattgctatagcaaatttgcggaataatactttcgaa
tgtaaaggttgtaaaaacaagacgcaaattgcgcaaattagactaccgtatgcggcgaag
ttacttttccaggaactaatggcaatgaatatcgcacctagactcatgacactttga
DBGET
integrated database retrieval system
