Aeromonas sp. CU5: CK911_13675
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Entry
CK911_13675 CDS
T05327
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
aem
Aeromonas sp. CU5
Pathway
aem02024
Quorum sensing
aem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK911_13675 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CK911_13675 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aem03019
]
CK911_13675 (hfq)
03036 Chromosome and associated proteins [BR:
aem03036
]
CK911_13675 (hfq)
Messenger RNA biogenesis [BR:
aem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CK911_13675 (hfq)
Chromosome and associated proteins [BR:
aem03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CK911_13675 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Iec3-like_M
Motif
Other DBs
NCBI-ProteinID:
ATL93749
LinkDB
All DBs
Position
complement(3086055..3086414)
Genome browser
AA seq
119 aa
AA seq
DB search
MTTESPSYSTIEQAFSLGNGQDSALNWLRKNRSQVAIFLVSGIKLEGTISGFDQYSVLLT
DAHGNQQLVYKAKISTIAMHSGRPPVNIQRARKPRVSMAPRPHSAPGRYDDNQGGGNNE
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgaatccccaagctactccaccattgagcaagccttttcccttggtaacggg
caagattccgcccttaactggttgcgtaagaatcgcagtcaggttgccatttttctggtg
agcggcatcaagctggaaggcaccatcagtggctttgaccagtacagcgtgctgttgacc
gatgcccatggtaatcagcagctggtctacaaggccaagatctccaccatcgccatgcac
tctggccgtccgccggtgaacatccagcgcgcccgcaagcctcgagtctccatggcgccg
cgtccccatagtgccccgggccgttatgatgacaatcagggcggtggcaacaacgagtaa
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