KEGG   Arsenophonus apicola ArsBeeUS: LDL57_01160
Entry
LDL57_01160       CDS       T07906                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
aet  Arsenophonus apicola ArsBeeUS
Pathway
aet02024  Quorum sensing
aet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LDL57_01160 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LDL57_01160 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aet03019]
    LDL57_01160 (hfq)
   03036 Chromosome and associated proteins [BR:aet03036]
    LDL57_01160 (hfq)
Messenger RNA biogenesis [BR:aet03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LDL57_01160 (hfq)
Chromosome and associated proteins [BR:aet03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    LDL57_01160 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: UBX29341
LinkDB
Position
279288..279584
AA seq 98 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNQGGNTGLGNYNTGNVAVPQDSDATE
NT seq 297 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttgcaagatccgttcctaaacgcgttacgtcgtgaaagggtt
ccggtttccatttatttggtcaatggcatcaaattacaaggtcaaatcgaatcatttgat
caatttgttattttactgaaaaacacagtaagccaaatggtatataagcatgctatttct
actgtagtaccttctcgtcctgtatctcaccatagtaaccaagggggtaatacaggccta
ggtaattacaatacaggtaatgtggcagttccacaggatagtgatgcgactgaataa

DBGET integrated database retrieval system