Aequorivita sp. H23M31: EI546_12650
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Entry
EI546_12650 CDS
T05794
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
aev
Aequorivita sp. H23M31
Pathway
aev02020
Two-component system
aev02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aev00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EI546_12650 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EI546_12650 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aev03021
]
EI546_12650 (rpoN)
Transcription machinery [BR:
aev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EI546_12650 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
MarR
SurA_N_3
Motif
Other DBs
NCBI-ProteinID:
QAA82515
UniProt:
A0A410G5P7
LinkDB
All DBs
Position
complement(2863387..2864850)
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AA seq
487 aa
AA seq
DB search
MLKQQLNLKLSQKLSPQQIQLMKMIQLPLQAFEQRISQEMQENPALEGGKEEGEDFGNEF
DNDSYEEDYDDGTEVIETDINVDDYLSDDEIPSYKLSANNYSADDEDRQIPYAAGTSFNQ
YLLQQLNTYRLDEDEVEIAKFLVGSVDESGYIRREIEDIVDDLAFTQNVYTSEDKVEKVL
KIVQELDPPGVAARDLQECLLLQLERKEPTPSVTLAIEIMETAFEQFSKKHYKKLIQKFN
ITEDQLREAIREIEGLNPKPGGTYSGNTRIVEHVIPDFAIKIIDGELDLTLNGRNAPELH
ISHDYTNMLKGYKEAKDKSKEQKEAIMFIKQKLDAAKWFIDAIKQRQQTLFVTMNTIMNH
QKEYFLSGDERKLKPMILKDIADKINMDVSTVSRVANSKYVDTPYGTKLIKEFFSESMKN
EMGEDVSTREIKKILEMTIAEEDKRKPLTDDKLAKILLEKGYPIARRTIAKYREQLDVPV
ARLRKEI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacagcagttaaatttaaaactctcacaaaaattatctccccaacaaatccag
ttgatgaagatgattcaacttcccttgcaggcttttgaacaacggatttcacaggaaatg
caagaaaatcctgctcttgaaggtgggaaagaggaaggtgaggattttgggaatgaattt
gacaatgatagttatgaagaagattatgatgatggcactgaagtaatcgaaacggacatt
aacgtagatgactatctaagtgatgacgaaattccaagttataaactttcggcgaacaac
tatagtgcagatgatgaggaccgtcaaataccttacgctgcaggaacttcctttaaccaa
tatttattacaacagctcaatacctaccgactggacgaggatgaggtggaaatagccaaa
tttcttgtgggcagcgtagatgagagtggctatataagaagagagatcgaggatattgtt
gatgatctagcttttacccaaaatgtttatacttcagaagataaagttgaaaaagtactg
aaaattgttcaggaattggatccacctggcgttgccgcccgcgaccttcaagaatgtttg
ctacttcaattagagcgaaaagaacctactccgtcagttaccttggccatagaaattatg
gaaaccgctttcgaacaattcagcaaaaaacattataaaaaacttatccaaaaatttaat
attacagaagaccaactccgggaagcaattcgcgaaatagaaggattgaatccaaagccg
ggtggaacttattctggcaatactagaattgttgaacacgtgattcccgattttgccatc
aagataattgatggcgaattggacctaaccctcaatgggcgaaatgcgcctgaactccat
atttcgcacgattatacgaatatgctgaaaggctacaaggaggcaaaggataaatcgaag
gaacagaaagaggcgataatgtttattaaacaaaaactcgatgcggcaaaatggtttatc
gatgccataaaacagcggcaacagaccttgtttgtaacaatgaacaccattatgaatcac
caaaaggaatattttttaagcggtgatgaacgcaaactaaaaccaatgatcctaaaagac
attgcagacaaaatcaatatggatgtctcaactgtctcccgtgtcgcaaacagcaagtac
gtggatacgccttatggtacaaaactgataaaagaatttttcagcgaatccatgaaaaat
gaaatgggtgaggatgtttccactcgggaaatcaaaaagattcttgaaatgaccattgcg
gaagaggataaacggaaaccccttaccgacgataaacttgctaagattttattggaaaaa
ggatatccaatagcacgaagaaccatcgcaaaatatagggaacaattagatgttcccgtg
gccaggctcagaaaggaaatctga
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