KEGG   Aequorivita sp. H23M31: EI546_12650
Entry
EI546_12650       CDS       T05794                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
aev  Aequorivita sp. H23M31
Pathway
aev02020  Two-component system
aev02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:aev00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EI546_12650 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    EI546_12650 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aev03021]
    EI546_12650 (rpoN)
Transcription machinery [BR:aev03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EI546_12650 (rpoN)
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID LacI MarR SurA_N_3
Other DBs
NCBI-ProteinID: QAA82515
UniProt: A0A410G5P7
LinkDB
Position
complement(2863387..2864850)
AA seq 487 aa
MLKQQLNLKLSQKLSPQQIQLMKMIQLPLQAFEQRISQEMQENPALEGGKEEGEDFGNEF
DNDSYEEDYDDGTEVIETDINVDDYLSDDEIPSYKLSANNYSADDEDRQIPYAAGTSFNQ
YLLQQLNTYRLDEDEVEIAKFLVGSVDESGYIRREIEDIVDDLAFTQNVYTSEDKVEKVL
KIVQELDPPGVAARDLQECLLLQLERKEPTPSVTLAIEIMETAFEQFSKKHYKKLIQKFN
ITEDQLREAIREIEGLNPKPGGTYSGNTRIVEHVIPDFAIKIIDGELDLTLNGRNAPELH
ISHDYTNMLKGYKEAKDKSKEQKEAIMFIKQKLDAAKWFIDAIKQRQQTLFVTMNTIMNH
QKEYFLSGDERKLKPMILKDIADKINMDVSTVSRVANSKYVDTPYGTKLIKEFFSESMKN
EMGEDVSTREIKKILEMTIAEEDKRKPLTDDKLAKILLEKGYPIARRTIAKYREQLDVPV
ARLRKEI
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgttaaaacagcagttaaatttaaaactctcacaaaaattatctccccaacaaatccag
ttgatgaagatgattcaacttcccttgcaggcttttgaacaacggatttcacaggaaatg
caagaaaatcctgctcttgaaggtgggaaagaggaaggtgaggattttgggaatgaattt
gacaatgatagttatgaagaagattatgatgatggcactgaagtaatcgaaacggacatt
aacgtagatgactatctaagtgatgacgaaattccaagttataaactttcggcgaacaac
tatagtgcagatgatgaggaccgtcaaataccttacgctgcaggaacttcctttaaccaa
tatttattacaacagctcaatacctaccgactggacgaggatgaggtggaaatagccaaa
tttcttgtgggcagcgtagatgagagtggctatataagaagagagatcgaggatattgtt
gatgatctagcttttacccaaaatgtttatacttcagaagataaagttgaaaaagtactg
aaaattgttcaggaattggatccacctggcgttgccgcccgcgaccttcaagaatgtttg
ctacttcaattagagcgaaaagaacctactccgtcagttaccttggccatagaaattatg
gaaaccgctttcgaacaattcagcaaaaaacattataaaaaacttatccaaaaatttaat
attacagaagaccaactccgggaagcaattcgcgaaatagaaggattgaatccaaagccg
ggtggaacttattctggcaatactagaattgttgaacacgtgattcccgattttgccatc
aagataattgatggcgaattggacctaaccctcaatgggcgaaatgcgcctgaactccat
atttcgcacgattatacgaatatgctgaaaggctacaaggaggcaaaggataaatcgaag
gaacagaaagaggcgataatgtttattaaacaaaaactcgatgcggcaaaatggtttatc
gatgccataaaacagcggcaacagaccttgtttgtaacaatgaacaccattatgaatcac
caaaaggaatattttttaagcggtgatgaacgcaaactaaaaccaatgatcctaaaagac
attgcagacaaaatcaatatggatgtctcaactgtctcccgtgtcgcaaacagcaagtac
gtggatacgccttatggtacaaaactgataaaagaatttttcagcgaatccatgaaaaat
gaaatgggtgaggatgtttccactcgggaaatcaaaaagattcttgaaatgaccattgcg
gaagaggataaacggaaaccccttaccgacgataaacttgctaagattttattggaaaaa
ggatatccaatagcacgaagaaccatcgcaaaatatagggaacaattagatgttcccgtg
gccaggctcagaaaggaaatctga

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