Actinidia eriantha (wild kiwifruit): 130758109
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Entry
130758109 CDS
T09464
Name
(RefSeq) tetratricopeptide repeat protein SKI3
KO
K12600
superkiller protein 3
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130758109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130758109
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
130758109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_11
TPR_2
TPR_17
TPR_1
TPR_14
TPR_16
TPR_19
TPR_12
TPR_8
TPR_9
TPR_CcmH_CycH
BTAD
TPR_7
ARM_TT21_C
TPR_15
Y2_Tnp
Motif
Other DBs
NCBI-GeneID:
130758109
NCBI-ProteinID:
XP_057468920
LinkDB
All DBs
Position
21:99090..116273
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AA seq
1182 aa
AA seq
DB search
MEEEEDGGGDAARQLQESIDLNPDDPETHYNLGLFLWEKGKESKEIREKAAEHFVISAKL
NPQNSAAFRYLGHYYRDDSIDHHRALKCYQRAVNLRPDDSQSGEAFCDLLDQGGKETLEA
AVCREASDKSPRAFWAFRRLGYLQIHQKKWSEAVPCLQHAIRGYPTCADLWEALGLAYQR
LGMFTAAIKSYGRAIDVEGSRVFPLVESGNIHLMLGCFRKGVEQFRQALQISPQNISAQY
GLAAALLGLSKECINSGAFKWGASLLEEASNVAKASTCLVGNISCIWKLHGDIQLAYAKC
LPWMEEGGCLETDEESFRTSILSWKRTCLSAAVSACSSYQRALHLASWQANIYTDIAIAS
DLISSLEKCLKRDTNVWQLPEKMSLGGLLLEGNNNEFWVALGCLCDHSALKQHAFIRALQ
IDVSLAIAWAYLGKLYGGEGEGQLGRQAFDRARSIDPSLALPWAGMSADIYARELTPDEA
YESCLRAVQILPLAEFQIGLAKLALLSGHLSASQVFGSIQQAVQRAPNYPESHNMNGLVC
EARLDYQNAAGAYRLALCAATAFAGKVPKSHIRDISINLARSLCRAGNAVDAVKECEDLD
KEGLLDLEGLQIYALSLWQLGKNDLVLSIITYLTTTALSMEQPSRDASVILICRLLYYIY
GLESAVISILKMPKELFQSSKTSFVVSAIHAMDQCNQLESVVLSSRCFLSSHEEITRMHY
LIALSKLVKQGSKECLGIQSGQQHLRKALHMYPNSDLIRNLLGYLQLSSKGWKDTHIASR
CFIVGHSGCLEEEGLKSAYEILGAGAVACYTTRNCSKKFAFPTCECHFLHETRLIRQLQR
QVHQEPWNHNARYLLIISYLQKAREGRFPQHLRDLLRRLINVALSNQSYLKQDTSSQYQM
FQILLCASEINLQSGDRIGCINYAKSASEISIPDNYLFFAHLQLCRAYAAEDKVSSLHEE
YIRCLELRTDCPIGWICLKIIECQYELQTDSNLLQLCLENCSKEIKNSKNMWMAVFSLVH
SLIAIWTKDFLCAEELLAQACSLAGTDSCLFLCHGAVCMELARQLCDSQFVSLAVRSFKK
AKEISVVSLPIVSVLLGQAEASIGSKAKWEKNIRLEWFSWPPEMRPAELFLQMHLLSRQS
KDGSDSSSRVELCQSPQSWILRAIHLNPSCLRYWKVLQKFME
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaagaagacggaggaggagatgccgcaaggcagttgcaagaatcaatagac
ttgaatcctgatgaccctgaaacccattataatctcggattgttcttgtgggagaagggc
aaagaatcgaaagaaatcagagaaaaagcggcagagcattttgtgatttcggccaagttg
aaccctcagaacagcgctgcttttagatatttgggtcattattacagagacgactccatc
gaccaccacagagctctcaagtgttaccagagagctgtcaacctgcgtcctgatgactcc
caatctggggaagcattttgtgatttgttggaccaaggaggaaaggagaccctggaggct
gctgtctgccgggaggcttctgacaagtctccaagggccttttgggctttccgaagactc
ggttaccttcagatccatcaaaagaaatggtctgaagcagtaccttgtcttcagcatgcc
atccgaggctatcctacctgtgctgatttgtgggaagctttgggtcttgcctaccagcgg
ttaggcatgtttactgcagctattaagtcatatggtcgggcgatcgatgtggagggctca
agagtctttcctttggttgaaagtggaaatatccatttgatgcttggctgctttagaaag
ggagttgagcagtttcggcaagctttacagatctcacctcaaaacatatcagcacagtat
ggccttgctgctgcacttctcggtttgtccaaggaatgtataaattcaggtgcatttaaa
tggggagcttcactgttggaggaggcatctaatgttgcaaaagcaagtacctgcttagtt
ggaaatatttcttgtatttggaagttgcatggagatatccagcttgcatatgcaaaatgt
ttaccgtggatggaggaaggcggctgcttagaaactgatgaggaatctttcagaacttcc
atcctttcctggaaaaggacctgtctttcagctgcagtttctgcctgtagttcctatcag
cgggctttgcacttggcatcatggcaagcgaatatctatactgatattgctatcgcgtca
gatctcatctcctctttggagaagtgtttgaaacgggacacaaatgtgtggcagctacct
gagaagatgtctttggggggcttgttgcttgagggtaacaacaatgagttctgggtggca
ttgggatgtttatgtgatcatagtgctttgaaacagcatgcttttatacgggcattgcag
atagatgtatctctagctattgcatgggcataccttggaaagctctatgggggagaaggt
gaggggcaattgggcaggcaagcatttgatcgtgctagaagcatagatccttcgctcgca
ttaccatgggcaggcatgtcagctgatatttatgctagggagctgaccccagatgaagca
tatgagagttgtttacgggctgtgcagatactgccacttgcagaatttcaaattggtctt
gcaaaacttgctctgctttcgggtcacctttcagcttcacaggtatttggatccatccag
caggctgtgcagcgtgcacctaactatcctgaatcgcacaatatgaatgggctggtttgt
gaagcacgattagattatcagaatgctgcgggagcctataggctagcgctttgtgcagcc
actgcttttgcaggcaaagttccgaaatcccatatcagagatatatcgattaatttggcc
agatcactttgtagggcagggaatgctgttgatgctgttaaggagtgtgaagacttggac
aaggaaggtttgcttgatttggaaggtttgcagatatatgctctttctttatggcagctt
ggaaagaatgacctggttctttccataataacatatcttactacaactgctttgtccatg
gaacagccctccagggatgcctccgtcattttaatttgtagacttctctattacatttat
ggactggaatcagcagttattagcattctaaaaatgcccaaagaattatttcaaagttca
aaaactagttttgtagtatctgccattcatgctatggatcaatgtaatcagctggaatca
gtggttttaagcagtcgttgctttctttcatctcatgaagagatcaccagaatgcactac
ttgatagcactcagtaaactcgtgaaacagggatctaaagagtgcctcgggattcaaagt
ggacagcaacatcttcgaaaagctcttcacatgtaccctaacagtgatttgataaggaat
ctgcttggttatcttcaactctccagtaaaggatggaaagatactcacattgcaagtaga
tgctttatagtaggccattctgggtgtttggaggaagagggtttaaaatcagcatacgag
atccttggtgctggtgcagttgcttgttacaccacacgaaactgcagcaagaaattcgct
ttcccaacttgtgagtgccatttccttcatgaaacaagattaatccgacaactgcagagg
caggtacatcaagagccgtggaaccataatgcccggtacttgcttataattagttatcta
cagaaggctcgtgaggggaggtttcctcaacatttgcgtgatctacttaggcggctaatt
aatgtagctctttcgaatcaatcgtatttaaagcaagatacgtcttctcaatatcaaatg
ttccagattctactttgtgcctcggagataaatttacaaagtggagaccgtattggctgt
atcaactacgcgaaaagtgcttcagagatttccattcctgacaattatctcttttttgca
cacttgcaattatgtcgtgcctatgctgcagaagacaaagtttcaagcttgcatgaagaa
tatataagatgcttggagctcagaactgactgccccatcggttggatatgccttaaaata
attgaatgtcaatatgaactacagactgattcaaatctattacagttgtgccttgagaat
tgctcaaaagagatcaagaattcaaaaaatatgtggatggcagtatttagtttggtgcac
agtctgattgctatttggaccaaggatttcctttgtgcagaagagttgcttgcacaagcc
tgttcgttagctggtactgacagctgcctctttctctgtcatggtgccgtttgtatggag
cttgctaggcagctttgtgattcgcagttcgtatcccttgccgttagaagtttcaagaaa
gctaaagagatttctgttgtctccttacccattgtctcagtattgctgggtcaagcagaa
gcaagcattggatctaaggcaaaatgggagaaaaacattcgtcttgaatggttttcttgg
ccaccagagatgaggcctgcagaactctttctacaaatgcatttgctttcaagacagtct
aaagatggttctgattcttcatccagggtggagttgtgtcaaagccctcagagctggatt
cttcgggccatccatttgaacccttcttgtttgagatattggaaagttttgcagaagttt
atggagtga
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integrated database retrieval system
