Actinidia eriantha (wild kiwifruit): 130762156
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Entry
130762156 CDS
T09464
Name
(RefSeq) uncharacterized protein LOC130762156 isoform X1
KO
K18734
protein SMG8
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130762156
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
130762156
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
130762156
NCBI-ProteinID:
XP_057473789
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Position
23:complement(6835506..6848138)
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AA seq
1234 aa
AA seq
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MDSPNPPSMRVLIRPPNSTQPTLSPLSSATLSPPIPPPPQPNPPPPPSLQNGIVVVGFIG
RRSGDVTQLINRVLDANVFGSGNCDQNFCTQKVDINDEVKNWFNCRRISYFHDSEKGIMY
LQLSSTGCPAMEDFLESSSSSPSFDLVLEERDFGDLRGMLFMFSVCHVIIFIQEGSRFDT
QILKKFRILQAAKHALAPFVRSQTTPPSTARSHPPSSRTSVSGTSSNNQSPGRSSGILSR
NASAISFRSGLGSYTSLFPGQCTPVILFVFLDDFLGINSGPNTEETTDTSSSLTQSSSLS
SLARTNLPMKGSGPVVVLARPVTKSEGGFKKKLQSSLEAQIRFSIKKCRTLTGSETSHAG
SRSGAISNTALLFSLDASKAVVLLDRYSNQKGESLDFATGLVEDVLNGKTTSDSLLLESH
SQSATQEDILSVKEFIYRQADILRGRGGLVTNTNSSSAAGVGMVAAAAAAAAASTASGKT
FTTPELPSIDIWLSSSQLILCGILSPKHGCIESESNKRNSQQNSTVAPVVEGLVSRVAHP
LEIAVSCLESGKGLNTKFSTLWCQRALPGAKEVYLNELPSCYPTSKHELQLEKALRAFCS
MVKGPAVQLFTKKLEDECTSIWSSGRQLCDAVSLTGKPCMHQRHSVETDGLLSKDGIKPH
SSGFVFLQACACGRSRRLRSDPFDFETANIISDCFTDCDKLLPSLELPQVMNAGPIQPSS
WSLVRVGGARYYDPSKGLLQSGFSATHKFLLKWKIFLEKPKDQHGLLDSVVQQGSLIRLS
STEPMKESIAGGDIKISDASRMNKEELQSEIKLQREPPSENHQSNEKKISFGRGIPNFTM
RKPFSEVVAGSAAAVSGFPPLQSRKQLSVGLVKGTKQSSAGDRGAERVHHTSEYQGSQQS
EDNSAVQDTVNGNGTGVNGCTDGIPILQIGSNVVPVDISRDENSKLSSSLKNVVVYVGFE
HECPRGHRFILNSEHLKELGSPYSLSEESHIPSSVENLDNKRVDHSKLGKNGSHGKAHRN
SNRMNNSAVRKVKNLDRSKDISGDGNLYLDGTVQFSRTGKEDTQSYIGMSTLNVSVKDLE
ESLHTVSLDDGAFSLLNRNLPIYMNCPHCRISKNKDPPTTKFAGTMSQLQRIFLVTPPFP
VILATCPVIQFEASCLPPSVPDREQKLQFNFGCHVILPPESFLSLRLPFVYGVQLEDGSL
QSLRPFERQPELTAWIAQGTTLQVMSKGSSLCDG
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggactcgcccaacccaccctctatgcgagtcctgattcgccctccgaattcaacacaa
cccactctctcccctctctcatcagccactctctctcccccaatcccaccgccgccccaa
ccaaatccccctccgccgccttctctccagaacggcatcgtcgtggtcggcttcatcggg
cggcgcagcggagacgtgactcagcttatcaatcgagtcctcgacgccaatgtgtttggt
tcgggtaattgtgaccaaaatttttgtactcagaaagtggatattaacgacgaggtgaag
aattggttcaattgtcgacgaatcagttactttcatgacagcgaaaaggggattatgtat
ttgcaattgtcctcaactgggtgtcctgcgatggaggactttctcgagtcgtcttcttct
tctcccagttttgatttggtattagaagagcgcgattttggggatcttcgaggaatgctt
tttatgttctctgtttgccatgtaatcatatttattcaggaggggtcacgcttcgatacc
cagatcttgaagaaatttcgaattttacaagctgccaagcatgcgctggctccattcgtc
agatctcaaactacaccaccatcgacagctaggtctcatcctccatcatcacgaacctct
gtatcaggaacatcttctaacaatcagtctcctggtagaagtagtggcatcttgagtcgc
aatgcttcagcaatttcatttaggtcgggtttaggttcatacacttcactgtttccagga
caatgtactccagttatactttttgtttttcttgatgacttcttaggcattaattcaggt
cctaatacagaggagacaactgacacgtcttcttcattgacccagtcctcaagtttgagc
agtttagctaggacaaacttgcctatgaaaggatcaggaccagttgttgtgctagcacga
cctgtgactaaatctgaagggggattcaagaagaaattgcagtcatcccttgaagcacag
atccgtttttcaattaagaaatgtaggacactcactggttctgaaactagtcatgctggt
tcaagaagtggggccatctctaatacagcgcttctattttctcttgatgcatccaaagca
gttgtattgttggatagatattcaaatcagaaaggtgaatctcttgattttgctactggt
cttgtggaagatgtcttgaatggaaagacaacatcagattctcttctgcttgaaagccat
agtcagagtgcaacccaagaggacattctatctgtgaaagagttcatttacaggcaggct
gatattttaagagggagagggggattggtcaccaacaccaacagtagctcagcggctggt
gttggtatggtggctgctgctgccgctgctgctgctgcatcaactgcatctggaaagact
tttactactcctgaacttcctagtattgacatctggttatcttccagtcaacttattcta
tgtgggattctttctccaaaacatgggtgcattgaatctgaaagcaataaaagaaattca
cagcaaaacagcactgttgcaccagtggttgaaggacttgtttcaagagttgcacatcct
ctagaaattgcagtatcttgtttagagagcggtaaaggacttaacactaaattttctact
ctatggtgccaaagagccctgcctggtgctaaggaggtttatttaaatgaattgccttca
tgttatccaacctcaaagcatgaattgcagttggaaaaggcgttgcgtgctttctgctca
atggtcaagggacctgccgtgcaacttttcacgaaaaaactggaggatgagtgcacatct
atttggagttctggaaggcaactgtgtgatgcagtcagtttgactggaaaaccatgtatg
caccagaggcatagtgttgaaactgatggtttgctttcaaaggatggcatcaaaccgcat
tcaagtggatttgttttccttcaagcttgtgcctgtggccgttcacgacgactgcgatct
gatccttttgattttgaaacagctaacattatttccgactgttttacagactgcgacaaa
cttcttccttcactcgaattaccacaggtaatgaatgcaggacctattcagccatcatcg
tggagtttggttcgagttgggggtgcaaggtactatgacccttctaaagggttgcttcag
agcgggttctctgcaactcataagtttcttttgaagtggaaaatttttcttgagaaaccg
aaagaccaacatggtttattagatagtgttgtgcagcaaggttctttaattaggttaagt
agtacagaaccaatgaaggagtctatcgctggaggagacataaagatatctgatgcctca
cggatgaacaaagaagaattgcagagtgaaattaaacttcaaagggagcctccatcagaa
aaccaccaatccaatgaaaaaaagattagctttggtagaggcattccgaattttacgatg
agaaaaccgttttctgaggttgttgctggatcagcagctgctgtttctggattccctcct
ttacagtcaaggaaacaactttcagtaggtttggtaaaaggtacgaagcaaagctctgca
ggagataggggtgcagaacgggttcatcatacttctgaatatcaaggatctcaacaatcc
gaagataactctgctgttcaggacactgtaaatggaaatggaactggtgtcaacgggtgc
acagatgggattccaattttgcagattggtagcaatgttgttccagtggacataagtagg
gatgagaatagcaaattaagttcttctttaaagaatgtagtcgtgtatgttggatttgag
catgagtgcccccgtggccatcgtttcatattgaactcagagcatctcaaagaacttggc
tccccatattccttgtctgaagaatctcatatcccctcatcagttgaaaatttagacaat
aaaagggtggatcattcaaaattgggtaagaatggtagccacggtaaagctcatcggaac
tcaaataggatgaataatagtgctgttcgtaaggtgaagaatctggataggagcaaagat
atatcaggtgatggtaatctatacttggatgggactgtgcagttctcccggactggaaaa
gaagatacccagagctatatcggcatgtctaccttaaatgtatctgtcaaagatcttgaa
gagagccttcatactgttagcctcgatgatggtgcattctccttattgaatagaaattta
ccaatatacatgaactgtccgcactgccggatctctaagaataaggatccccctacgact
aaatttgctggcaccatgtcacagctgcagaggatctttttggtcacacctccttttcca
gtcattttagctacatgcccagttatacaatttgaggcatcatgtctgcctccatctgtt
ccagaccgtgaacagaagttgcagttcaactttggatgccatgtgattttaccgcctgag
agttttctttctcttagacttccatttgtttatggtgtgcaactggaggatggaagtctg
caatctcttagaccttttgaacgccaaccagaactcactgcctggattgcacaaggtaca
acattgcaggtcatgtccaagggaagcagtctgtgtgatggatag
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