Actinidia eriantha (wild kiwifruit): 130764518
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Entry
130764518 CDS
T09464
Name
(RefSeq) uncharacterized protein LOC130764518 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130764518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130764518
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130764518
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130764518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
130764518
NCBI-ProteinID:
XP_057476797
LinkDB
All DBs
Position
24:complement(15813881..15839824)
Genome browser
AA seq
2366 aa
AA seq
DB search
MSHFSSIIANQIRFLLQSLNDLNSDFVIRELCQFVDWGCEGSILLLQTFLDHTNFQNGDV
DNLQFKPDLLAAIFRNLLQCPNFSTVLCEAVRTMVISEQFITDFCDTLHLSVSEKLGIGL
ALADSENFDIRISGQNFCIGQIKELGKNSSVIDSSEQIQNIILFLNGSEGLSKHVDPFMQ
MLSLMEPKEGTPLVLAPLLSDDDLLEARNLELFYGCRENEFDEILDEIVNETSLGDIISE
LGYGCTVDASHCNEVLSLFLPLTEATLSRLLGAIARTYTGREDNQNCCSAFYCAIGSSAT
LESTCLSSWNVNVLVDSINQLAPNTNWTLAMENLDHEGFYIPSEQSFSLFMSIYRHACQD
PFPLHAICRSVWRNVDGQLSFLRYAVSAPPEIFMFAHSSRKLAYANELNAKEVPNALANH
AWLSIELLEILCQLAERGHAEAVQQILELPLKQCPEVLLSGIAQINTPYNLLQYEVFSTV
FPIIFGDANGCGIILQLWKSNPKLVLRGFIDMMTTDQGNIVTVFNNSQELKIMPSLLKQV
PFYFGIRLAVLAKQKECIDLEKWLSDNIRTQKDVFFEACLKFVKEILFTHKDISANSFQH
SGALESLNAKICSTFLEALEANTVHITSEKLSEELKRLCKMSTHVGLRMQNAGNSDSTKP
SGYSDDIEAEANSYFCQLFSGQLTTDSLVQMLTHFRESSERREQLIFECMIQNLFAEWHN
FRRAPESNLNTAAILVGSLIRYRLVTHLTLGIALRKVLDALRKPPDTKIFAFGILAIEQF
LDRLVEFPLLCNHILQISHLRGIQPKLVAFIEHTLARISSSHLESNGGSSAADSHSGSSP
ASLETLELLGYGTSQPGKQLSCSLPLQQRHQGFLVDKHITSTTSDIYSNPLLPPPGNSPI
VPSSDIPFIQKSLQMVSSHNANVVPPIVSSSSGFLHSSRSLTSSWFNSTLNIETLVAAAE
RRGARIEDPASDIQDKILFMINNISSSNIEAKAKEFTEILNEQYYPWFAQYMVMKRASIE
PNFHDLYMAFLDKVNSKALNKDIVKASYENCKVLLRSELIKSSSKERSLLKNLGSWLGKF
TIGRNQVLKAQEIDPKSLIIEAYEKGLMIAVIPFTSKILEACQSSLAYRPPNPWIMAILA
LLVEIYELPNLKMNTKFDIEVLFKTHGVDMKEVRPTSLLKDRVREVEGNPDFSNQDIGGS
QPQVITEIRTGITSSSNEYPGNLHSASSSLMEDENMPTLSLLERLPSRRGLSQVSSSQSP
YSVGQQLSSPIHDIGSHIIFNNKLSALGLQYFQRIVPLSMEKAIKEVMSHVVQYSLTTAI
QTTTELVLKDYAMESDKTRVYNAAHLMVASLAGSLAHVTCKEPLRVSISSQLRNSLQSFN
IPGELQEQAVDIILNDNLDLGCAVIERAATDKALKNIDIEITQKLSLRRKHEETAEPSYH
DASIYTQGPLGGIPEALRPRPCHLSRSQQQVYELNPRLYSSALGSLGLSSVAQPIDPIYE
KVDLSSNQLHGVSSARILATDGVIPHDVLVDNVASLSSTSVANETCCLETSNAVKELEET
VPQLPTNSITEQTTTGISRPLYNTGDALEKYQIVAQKLETLIIKDVGEAESQGVIAQIPE
IILKCISRDEAALAVAQKVFKSLYENASNSSHVSAHILILAAIRDVCKLVVKELTSWVIY
SDEERKFNTKITVELIRKDLLNLAEYNMHMTKLIDAGRNKSATEFAISLLQTLLVQDLRV
SVSELSNLVDVLFKLASKPGAPDSLQQLVKITKNPDANAAPLSRFSVGKDDMAKQSREKK
GSDNAVSTMEEYIPVDARARDPANFHDQVSELFAKWYNIYELHGPSDAACYRFISQLHQS
GYFNEDDLSDRFFYHLTELSVTYCLSTKGISSMSSSSQPPQISQDLSFLSVDVYAKLVIM
ILKYCMAEHGPHELLFQKILTVTVRVIQRDAEEKRASFNPRPYFRMFINWILDLFGPDPI
LDDSNFQVLIAVANAFHVLQPLKVPAFSFAWLELISHRSFMPNFLTVNPPKRWPYVQRLL
VDLFKFMEPYLRNAELRKTIRLLYEGTLRVLLVLHHDFPEFLSEYHFSFCDVIPSSCIQM
RNVILSAFPRNMRFPDPYTSNFKIDLLAEINQPPRIFSEVDAALKEKQMKLDVDEYLKRS
RHHESFLSELMQRLVLTQNEAAQAGTRYNVPLINSLILYVGMQTIQEMQAQTPLPLAQQM
TQNDSMKYLMDPALDIFKTLIMDLDSEGRYLFLNAIANQLRYPNSHTYFFSFVLLYLFLG
ANQEIIQEQITKVLLERLYVKNPHPWGILVTVIELIKNHKYDFWSRSFTRCAPEIESFLK
SISRSCGVLKPIDESIVSVGIPDKMH
NT seq
7101 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatttctcttcgatcatcgcgaatcagattcggttcttgcttcagagccttaac
gatctcaattctgatttcgtcattcgcgaactctgtcagtttgttgactggggatgtgag
ggtagcatattgctgctccaaaccttcttggatcatacaaattttcagaatggagatgtg
gacaaccttcaatttaagccggatttattagctgcaatctttagaaatttattgcagtgc
ccaaatttcagcactgtgctttgtgaagcggtgaggaccatggtgatcagtgaacaattt
attacagacttttgtgacacgttacacctatcagtgtctgaaaaattagggattggcctt
gctttggcggattctgaaaattttgacattaggataagtggccaaaacttctgcattggc
caaattaaggagttggggaaaaattcttctgtaatagattcttctgagcaaattcaaaat
attatcctgtttttgaatggctcagagggcctctctaagcatgttgatccctttatgcaa
atgctgtctttgatggagccgaaggaggggactccactagtactagctccattgctttct
gatgatgatttacttgaggccaggaatttggagttattctatggttgtagagaaaatgaa
tttgatgaaattctagatgagattgtgaatgaaaccagcttaggtgatattatatctgaa
ctgggttatggatgcacggttgatgcttcacattgcaatgaagtattatctcttttcttg
cctctcactgaagctacactttctagattacttggggcaattgctcgcacatatacgggc
cgtgaggataaccaaaattgttgttcagcattctattgtgctattggtagcagtgccaca
cttgagtcaacatgcctgagctcttggaatgttaatgtccttgtagattcaattaatcaa
cttgcccctaataccaactggacactcgctatggagaatctggatcatgagggtttttac
attcccagtgaacaatctttttcccttttcatgtccatttatcgtcatgcatgtcaggat
ccctttccactgcatgccatatgcaggtctgtctggaggaatgttgatgggcagctatct
tttctcagatatgctgtatcagcaccacctgaaatatttatgtttgctcattcttccagg
aaactggcatatgctaatgaattgaatgctaaagaggttccaaatgcacttgcaaatcat
gcatggttatctattgaacttctagagattttgtgtcagctagctgaaagaggccatgct
gaagctgttcaacaaattcttgagcttcctcttaaacaatgccctgaagttttgttatct
gggattgcacagattaatacgccctataatctacttcaatatgaggtattttccacggtt
ttccccataatatttggtgatgccaatggatgtggtatcattcttcaactttggaaatct
aatcccaagcttgtgttgcgagggttcattgatatgatgacaacagatcaaggcaacatc
gttactgttttcaacaattcccaggagttgaagattatgccatctctattaaagcaggtt
ccattttattttggcattcgactggctgttctagctaaacagaaggaatgcatagatctc
gagaaatggttaagtgataatataagaactcaaaaagatgtattctttgaggcatgcctc
aagtttgtcaaggagatactttttacacacaaagatatttctgcaaattcctttcaacat
tctggagctctggaaagtttaaatgccaaaatatgttcaacattcttggaggcccttgaa
gctaatactgtacatattacctctgagaagctttctgaggaactgaaaagattgtgtaaa
atgtctacacatgttggtttgagaatgcagaatgctgggaattcagattcaacaaaaccc
agtggatattcggatgatatcgaggcagaagctaattcttacttctgtcaattattttct
ggtcagctgactactgattctctggttcaaatgcttactcacttcagggaatcatctgag
agaagggaacagttgatttttgagtgtatgatccaaaacctgtttgcggagtggcataac
ttccgtcgggctccagaatcgaatcttaatactgcagctatcctagttggttccctaata
aggtaccggcttgtgactcatcttacacttggtatagcactacgtaaagtgttggatgca
ttgcgtaaacctccagatacaaaaatatttgcttttgggatcctggctatagagcagttt
cttgaccgcttggtggagtttcctctgctttgcaatcatattttgcaaatatctcattta
cgtggtatccaacccaaactcgttgcatttattgagcatactctggctagaatatcatca
agccacttggaatccaacggaggcagttctgcagctgactctcacagtggttctagtcca
gcttcattggaaactttggagttattgggatatgggacctcacagcctgggaagcaactc
tcttgttcactcccgctgcaacagagacaccaaggttttcttgttgacaagcatataaca
tctaccacttcagacatttactcaaatccacttttacctccccctgggaattcaccaatt
gttccgtcgagtgacattccttttattcagaagtctttacaaatggtttcatcacataat
gcaaatgttgttccaccaattgtttcatcttcatctggttttctccattcttccaggtca
ctcacttcaagctggttcaattccactttgaatattgaaacactcgtcgcggcagctgag
aggagaggtgctcgcatagaggatcctgcatcagatattcaggacaagatactatttatg
attaataatatttcatcctcaaatattgaagctaaagcaaaggagttcactgagattcta
aatgaacaatattatccttggtttgcacaatacatggtgatgaaaagagcaagcatcgaa
cccaatttccatgacttgtacatggcatttctagacaaagttaattcaaaagcattgaat
aaagatattgtcaaagcttcttatgagaattgcaaggttcttttgagatcggaattaata
aaatcaagttcaaaagagcgttccttgctgaaaaatttaggtagctggctaggaaagttt
accataggtagaaatcaagtactcaaagcccaagaaatagatcccaaatctttgataata
gaggcatatgagaagggattgatgattgcagtgattccatttacctcaaagattttggaa
gcatgccaaagtagtcttgcctatcgcccccctaatccttggataatggcaattcttgct
ttacttgttgagatttatgagttacccaatctgaaaatgaatactaagtttgatattgag
gttctctttaaaacccatggtgtggacatgaaagaagtaagaccaacatctctgctcaag
gatcgagttcgggaagtggaaggcaaccctgacttttctaatcaagatattgggggatcc
cagccgcaagtgatcactgaaatccgcactggaattacctcttcatcgaatgagtatcct
gggaatcttcattctgcatcaagttcattgatggaggatgaaaacatgccaaccttaagc
ctcttagagcgacttccttctagacgagggctttctcaagtatcttcatcacagtcacca
tattctgttggtcagcagctctcgtcacctatccatgatattggaagtcatattattttc
aacaataaactcagtgctttgggtttgcaatattttcaaagaattgttcccctttcaatg
gagaaggctataaaggaggtaatgtctcatgttgttcaatacagtttaaccacagctatt
cagacaacaacggaacttgttttaaaggactatgctatggagtctgataagacccgtgta
tataatgctgctcacttgatggtggccagtctagcaggaagtttggcccatgtaacctgc
aaggaacctctacgtgtctccatatcgagtcaacttaggaattcgttgcagagcttcaac
atccctggtgaacttcaagagcaagctgttgatattatattaaatgataaccttgatctt
ggttgtgcagtgatcgagcgtgctgcaacagacaaagcattgaaaaacattgatatagaa
ataactcaaaaactttcactaagaagaaagcatgaagaaactgctgaaccatcatatcat
gacgcaagtatatatacgcaaggtccattgggtggtataccggaggccctccgccccaga
ccttgtcacctctctcgttctcaacagcaagtttatgagcttaacccaagactctattcc
tctgcacttgggagtttgggtttgagctcagttgctcagccaatagatcccatatatgag
aaggtggaccttagttccaaccagcttcacggtgtttcctctgctcgcattcttgcaact
gatggtgttattccacatgatgttttagttgacaatgttgcttccctttcttcaacatct
gttgccaatgaaacgtgttgtttagagacctctaatgctgtgaaagaattggaagagact
gttccacaattacctacaaattctatcacagagcagacgactactggcatttcacgaccg
ctatataacactggagatgctttggagaagtatcaaattgttgctcaaaagttggaaaca
ttaataattaaagatgtcggggaggcagaaagtcagggagttattgcccaaattcctgaa
atcatactaaaatgcataagccgagatgaagctgcattggctgtagcccaaaaggttttt
aagagtttatacgagaatgcttcaaacagttcacatgttagtgctcatattttaatcctg
gctgctattcgagatgtatgcaagctagttgttaaggagcttacaagctgggtgatctat
tcagatgaggagaggaagttcaacacaaaaataactgttgaacttattcgcaaggacttg
ctgaacctcgcagaatacaacatgcacatgacaaagcttattgatgctgggcggaataaa
tctgctacagaatttgcaatatctcttctccaaactttgttggttcaggacttgagagtt
agtgtatctgaactttccaatttagttgatgtgttgtttaagcttgcgagtaaacctggg
gctcctgactctttacaacagttggtcaagattacgaaaaatcctgatgctaatgcagcc
cctctttctagattttctgttggcaaggacgacatggccaagcaatccagagaaaagaag
gggtctgacaatgctgtttcaaccatggaagaatatatccctgttgatgctcgggcacga
gaccctgccaactttcatgatcaggtttctgaactatttgcaaaatggtacaatatatat
gaactccatggtccaagtgatgcagcttgttatcgctttatctcccaattacatcaaagt
ggttattttaatgaggatgatctctccgatcgtttcttctatcatctcacagaactttct
gtcacatattgtctctcaactaagggaattagttccatgtcctcatcatcccagccacct
caaatatcacaagacctatcgtttctctccgttgatgtgtatgcaaagcttgttattatg
attttgaagtattgcatggcagagcatggaccacatgaactcctttttcaaaagatatta
acagttactgtgagagtcatccaaagagatgctgaggagaaaagagcatcttttaatccg
aggccatatttcaggatgtttattaactggattcttgatctttttggccctgatcccatc
ctggacgattctaactttcaggtgttaattgctgttgcaaatgctttccatgtgttgcag
cctcttaaagttcctgctttcagctttgcatggcttgaactcataagtcacaggagtttt
atgcctaactttctgaccgtcaaccctccgaaacgctggccttatgtccaacgattgctg
gtagacctgttcaaattcatggagccatatctacggaatgctgaactgagaaaaacaatc
cgtcttctctacgaaggcactctgagggtgttgcttgtcttgcaccatgattttccggag
ttcctcagcgaatatcatttcagcttttgtgatgtgatcccttccagctgtattcagatg
agaaatgtcatcctcagtgcatttccacgcaatatgagattccctgatccttatacgtcc
aacttcaagattgatttgcttgcagagatcaaccagccaccacgtattttctcggaagtt
gatgctgcactcaaagaaaaacagatgaagttggacgtagatgagtatctcaagcggtca
aggcatcacgaatcattcttgtcagaactgatgcagagattggtgctgacacaaaatgag
gcagcacaagctgggacccggtacaacgtccccttgataaactctcttattctttatgtt
gggatgcagactatacaagaaatgcaagcacagactccacttccacttgcacaacagatg
actcagaatgattccatgaaatatctgatggatcctgccttggacattttcaaaacgctg
attatggaccttgactctgaagggcgttatctcttcctcaatgcaatcgcaaatcagcta
cgctacccaaacagccacacatatttcttttccttcgtccttctctacttgtttttggga
gctaaccaggaaattatccaagagcaaataacaaaagttttattggaacgcctgtatgtg
aagaacccccatccttggggcattctagttaccgtcattgagctcatcaagaatcacaaa
tacgacttctggagccggtcgttcacaaggtgtgcaccagagattgagtcatttctcaaa
tcgatttccagatcgtgtggtgtccttaaacctattgatgaatctatagtatctgttggg
attcctgataagatgcactaa
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integrated database retrieval system
