Actinidia eriantha (wild kiwifruit): 130781383
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Entry
130781383 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC130781383
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130781383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130781383
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130781383
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130781383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
130781383
NCBI-ProteinID:
XP_057496572
LinkDB
All DBs
Position
7:complement(6418804..6452678)
Genome browser
AA seq
2419 aa
AA seq
DB search
MLLLSSALPGQMRYSLQSLNGSNSDAVFQELCQYAGYGTEGSILLVQTCLDHLNIHGKDL
KNLQLEPIFCSIFKYILDKPNFSTVLCELLRSEAINEDFLENLSNALRLSASDKIGIGLX
LSDSENSDIRMLGKNFCMTQIGQLFTSHSSVDSIEQIQNIYMFLRQSEDLSKHADSFMEM
SLFEMDHDPFILAPLLSDKLHEAMCSRNLDLFDEGNENDFDTVLAEVEGEMSVADIMKEL
GCGCTVNVSQCTEMLSLFLPLNEITVSRILGTLARTHAGLEDSQIAFSTFSSALGNGSSS
DMPVLSSWNIDVLIDSINQLAPGTNWTSVIENLDHEGFYFPSEAAFSLFMSVYRHACQDP
FPIHAICGSVWKNTEGQLSFLKHAVSVPPEVFSFAHSERQLAYVDAVHGHKFQIGHAHHA
WLSLDLLEVLCLLAERGHASTIRSMLKHPLEHCPEVLLLGMAHINTAYNLLQDEVSSAVL
PMIFKSSLGSGMILHLWRVNPNLLLRGFLDAYNTDPDDMSRVLDICQELKILLQVLEMVP
LYFGIRLAALASRKELVDLENWLSSNLSTYKSIFFEECLKFLKEIQFGASQDVSADHFNS
SGALPNLYSETSPTFLKVLQAHTGLIISSQLSEEVDKLMYMNTNPRMKNGGASDSSPSDG
YADDIEAEANSYFHQMFSGQLTIDTMIQMLARFKESLEKREQSIFECMIGNLFEEYKFFP
KYPERQLKIAAVLFGSLIKHQLVTHLTLGIALRGVLDALRKPTDSKMFVFGTKALEQFVD
RLIEWPQYCNHILQISHLRASHFELVAFIERALDRISSGHSESDGGHNFSADQHGSIQTT
ATNMEVTGSSFPLIGSVGTQPAPQISSSIQLQQRHQIRLEETPKVPVSSSNFLKPLTSPA
GQSSLISTSDAASIQKPQNVVSSSVLSSSTGFMRPSRAITSARFGSALNIETLVAAAERR
ETPLETPASEIQDKISFIVNNLSATNFEAKAKDFSEILKEQYYPWFAQYMVMKRASIEPN
FHDLYLKFLDKVNSKPLNKEIIQATYENCKVLLGSDLIKSSSEERSLLKNLGSWLGKSTI
GRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYRPPNPWTMGILGLL
VEIYAMPNLKMNLKFDIEVLFKNLGVDLKDVTPTSLLKDRVRQVEGNPDFSNKDVGVSQQ
QMVGEVKSGTISTLNQVELPLEVASASHAGGHSHILSQYAAPLHLSSGTLTEDEKLAALG
LSDQLPSAQGLLQRQSSFSVSQLPTPASNIEQQVIVNPKLHALGLYLHFQSVVPIAMDRA
IKEIVSGIVQRSVSIATQTTKELVLKDYAMELDETRIRNAAHLMVASLAGSLAHVTCKEP
LRGSIASQLRNSLQGLNIANELLEQAVQLVTNDNLDLGCALIEQAATEKAIQTIDNEIAQ
QLSIRRKHREGVGPAYFDSGMYAQGHAGVLPEALRPKPGRLSHSQQRVYEDFVRLPWQNQ
SSHSSNNLVVGPTASPVSSGASRVFNSATTQSTPGIYSSGLGNTGIQHQTLDIVSEDMES
SSAQLHSASSTHIGADGVNSHDFENDAIVASFPSASAAELYTAEISTIVKESGASSHSLP
STPAMERLGNVTSEPLLTTGDALEKYQIISEKLETLVTSDAKDADIQGIIVEVPGIILRC
ISRDEAALAVAQKVFKGLYENASNSAHVTAHLAILAAIRDVSKLVVKELTSWVIYSDEDR
KFNKEITIGLIRSELLNLAEYNVHMAKLIDAGRNKAATEFAISLIQTLLINDSRVISEVH
NLVDALAKLAARPGSPESLQQLVEVARNPSANPAAFSAVSVGKEDNTRQAREKKAPGHSV
VSKEDYSVVETVEPDAAGFRDQVSMLFAEWYRICELPGTNDAACAHYILQLQQSGLLKGD
DISDRFFRCLTELSVSHCLSSEVISSGPLQSPQQVHPLSFLAIDIYAKLVFSILKFYPVD
QGSSKLSLLPKVLAVSVRFIQKDAEERKVSFNARPYFRLFINWLLDLGSMDPVFDGANFQ
VLIAFANAFHALQPLKVPGFSFAWLELVSHRSFMPKLLTGNAQKGWPYMQRLLVDVFQFL
EPFLRNAELEEPVHFLYKGTLRVLLVLLHDYPEFLCDYHFSFCDVIPPSCIQMRNIILSA
FPRNMRLPDPSTPNLKIDLLAEISQPPRILSEVDAALKAKLIKGDLDEYQKTRQQGSSFL
TELKQKLLLPPGDAARAGTRYNVPLINSLVLYVGMQAIQQLQARTPPHAQSMASSVPLAA
FLVGAALDIFQTLIMDLDTEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAESNQEIIQ
EQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESVSRSCG
GPKSVDESVVTGGISDNMH
NT seq
7260 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttctctcttcggccctcccgggccagatgcgttactccctccaaagcttgaac
ggatccaactccgacgcggtcttccaagagctctgtcagtatgctggatatggaaccgag
ggaagcatattgctcgtgcaaacctgcttggatcacctgaatattcatggaaaagatttg
aagaatctgcaactggaaccaattttttgttcaatttttaaatacatcttggataaaccg
aactttagtacagttctctgtgagttactaagaagtgaagcaatcaatgaggattttctt
gaaaatctatctaatgctttacggttgtcagcatctgataaaattggaattggtcttngc
ttgtcagattcagaaaattctgacatcagaatgctggggaagaacttctgcatgactcag
attgggcaactatttaccagtcactccagtgttgattctattgagcaaattcagaacatt
tatatgtttcttcggcaatcagaggacctgtcaaagcatgctgattcattcatggagatg
tctttatttgaaatggatcatgacccatttatattagctccattgctttcggataaattg
catgaggcaatgtgttcaaggaacttggatttgttcgatgaaggcaatgagaatgacttt
gatactgttctagcagaagtggagggggagatgagcgtggctgatataatgaaggaattg
ggttgtgggtgcacagttaatgtctcacagtgcacagagatgttatctcttttcttgccg
ttgaatgaaatcactgtctccaggatacttggcacgcttgctcgcacccatgctgggctt
gaagacagtcagattgcattttcgacattcagttcagctcttggcaatggcagttcatct
gatatgccagtgttgagctcatggaatattgatgtccttattgattcaatcaatcagctt
gctcctggaaccaactggacaagtgttattgaaaacctagatcatgagggattctacttc
cccagtgaggcggcattttccttatttatgtcggtttataggcatgcatgccaggatccg
ttccctatccatgctatttgtgggtctgtttggaagaatactgagggccagctatctttt
ctcaagcatgctgtttcggtaccccctgaagtattttccttcgcacattctgaaaggcag
ctggcatatgttgatgctgtgcatggtcataagtttcaaattggacacgcacatcatgct
tggttaagtcttgaccttttagaggtgctgtgtcttctagctgagagaggtcatgcgagt
accatccgatctatgcttaagcatccccttgagcactgtcctgaagtcttgcttctaggg
atggcccacattaatactgcttataatctcctccaggatgaagtttcttcagccgttctc
cccatgatatttaaaagtagcttaggaagtggtatgattcttcatctctggcgtgtcaat
cctaacctattgctgcggggatttttggatgcttacaacacggatcccgatgacatgagt
agagttttggacatctgccaggagctaaagatactcttacaagtattggaaatggttcct
ttatattttggtattagactggctgcccttgcttcacgaaaagaacttgtagacctggag
aactggttgagttctaatttaagtacttacaaaagtattttctttgaggagtgcctcaaa
ttcctaaaggagatacagtttggtgcatctcaggatgtttctgcggaccatttcaactct
tctggtgctcttccgaacctttattcggagacaagtcctactttcttgaaggttcttcaa
gctcatacgggcttgattatctctagccagctttctgaggaagtggacaagttaatgtac
atgaatactaatccaagaatgaagaatggtggggctagtgattcatcaccctctgatgga
tatgcggatgacattgaggcagaagcaaattcttacttccatcaaatgttttctggtcaa
ctaacaattgacacaatgattcaaatgcttgctcgattcaaggaatctcttgagaaaagg
gaacagtcaatttttgagtgcatgattggcaatctatttgaagaatacaaattcttcccc
aagtaccctgagaggcagctcaaaattgccgcagttctctttggctctctcatcaagcat
caacttgtaactcatctcactcttggtatcgccctccgaggtgttttggatgcattgcgt
aaacctacagattccaaaatgtttgtgtttgggacgaaggctctggaacagtttgtggac
cgtttgattgagtggccacagtattgcaatcatatcttacaaatatctcatctgcgtgct
tctcattttgagcttgttgcattcattgagcgggcacttgaccggatttcatcaggccat
tcggaatcggatggtggacataacttttctgctgaccaacatggttctattcagactact
gccacaaatatggaggtaaccgggtcatccttcccattaattggatctgttggcacacaa
cctgcgccacaaatttcttcttcgattcagcttcaacagagacaccaaattcgtttagaa
gagactccgaaagtccctgtatcttcgtctaacttcttgaagcctcttacatctcctgca
gggcaatcttctctcatttccacaagtgatgcagctagcattcagaagccacagaatgta
gtaagctcgtctgtgctgtcttcctcaactggttttatgcgtccatctcgagcaattacc
tcagcaaggtttggctctgctttaaatattgaaacacttgttgctgccgcagagagaaga
gaaactcctttagagactccagcatcagagattcaggacaagatttcatttattgtaaat
aatttatctgcgacaaattttgaagctaaagcaaaagatttttctgaaattttgaaagag
cagtactatccatggtttgctcagtacatggtaatgaaaagagcaagcattgagccgaat
tttcatgacctgtacttgaaattccttgacaaagttaactcgaagcctttgaacaaagag
attatacaagccacttacgagaactgcaaggttcttttgggatcggatcttataaaatca
agttcggaagagcggtctttgctaaagaatctgggaagttggcttgggaagagcacaatt
ggacgcaatcaagttttgagggcacgtgagattgatcccaaatctttgatcatagaggca
tatgagaagggcttgatgattgcagtaatcccattcacctccaagatattggaaccatgc
caaagcagtctagcatatcgacctcctaatccttggaccatgggtattcttggattactt
gttgagatttatgcaatgccaaatttgaagatgaaccttaagtttgatatagaggtccta
ttcaagaacctgggtgttgatctgaaggatgtaactcctacttcccttctcaaggacagg
gtaaggcaagttgaaggaaatcctgacttttccaacaaagatgttggggtgtctcaacaa
cagatggttggtgaagtcaaatctggtacaatatctacactaaatcaagttgagctaccg
cttgaggttgccagcgcatctcatgctggtggccattcacatatattgtctcagtatgcc
gctcctcttcatctttcgtctggtacattgacggaggatgaaaagctggcagctttaggc
ttgtctgatcagctcccttctgctcaaggactattacaacggcaatcatcattttctgtt
agtcagcttccgacacccgcatccaatattgagcaacaagttattgtcaacccaaagctt
catgcgcttggcctgtacctgcattttcagagtgtggttccaattgctatggatagagct
atcaaggagatagtgtctggtattgtgcagcgtagtgtttctatagcaacacagacaaca
aaggaacttgttttaaaggattatgccatggaattagacgagacgcgcatacgtaatgca
gcacacttaatggttgccagtttggctggaagtttggctcatgtaacatgcaaggaaccc
ctacgtggctcaattgcaagtcaactcaggaattcacttcagggtttaaatattgcaaat
gaacttcttgaacaagctgtgcagcttgttactaatgataaccttgatctgggctgtgca
ctgattgaacaagctgcgacagagaaggcaatacaaaccattgacaatgaaatagctcaa
caactttctataagaaggaagcatagagaaggtgttggtcctgcatatttcgattctgga
atgtatgcacaaggtcatgcgggtgtcttaccagaagctctccgccctaaacctggccgc
ttatctcattctcaacagcgagtttatgaggattttgttcggttaccctggcagaatcag
tcaagccatagctcaaataacctagtagttggtccgacggcttcacctgtcagttctggg
gcgtcccgagtgtttaattcagcaacaacgcaatcaaccccaggcatttattcatctggc
ctaggaaacacaggaattcagcatcaaaccttggatattgtctctgaggacatggaatct
agttctgctcaacttcatagtgcttcctcaactcatattggggctgatggggttaattca
catgattttgaaaatgatgctattgttgcttcatttccttcagcctcagccgctgagtta
tatactgcggaaatttccactattgtaaaagaatccggagcttcttcacattcattacct
tcaactcctgcaatggaacgcctaggaaatgttacttcagaacctttgttgaccacgggc
gatgcattggaaaaataccagattatttcggagaagctggaaactctggtaacaagcgat
gctaaagatgcagatattcagggcattattgttgaggttcctggaatcattcttagatgt
ataagtcgtgatgaagccgcattggctgtggctcaaaaggtattcaagggtttatatgaa
aatgcgtcaaatagtgcacatgttactgctcaccttgctattctggctgccattcgtgat
gttagcaagctcgttgttaaggagctgactagttgggtaatatactccgatgaggatcga
aagttcaacaaagaaattactattggccttattcgaagcgaattattaaaccttgccgag
tacaatgttcatatggctaagctgattgatgctggaaggaataaggctgcgactgagttt
gccatttcccttattcaaacattattgattaatgattccagagtaatttctgaagttcat
aatctcgttgatgcattggcaaagcttgcggctaggcctggttccccggagtcgttacaa
cagctggttgaggttgccaggaatccttctgcaaatcctgctgctttttctgcagtttct
gttgggaaggaggataacaccagacaagctagagagaaaaaggccccaggtcactctgta
gtgagcaaggaagactacagtgttgtggagacagtggaaccagatgctgctggttttcgt
gatcaggtttccatgctgtttgcggaatggtacaggatctgtgaacttcctggtacaaat
gatgcagcttgtgcccattacatcttacaattgcagcaaagtggattgctgaaaggggat
gatatttcagatcgatttttccgctgcctcacggaactttctgtgtcgcattgcctgtca
tctgaggtcattagttctggccctctgcaatcacctcaacaagtccatcccctctccttc
cttgctattgatatctatgcaaaacttgttttttcgatcctaaagttttaccctgtggac
cagggatcaagcaaactctctcttctgcccaaggttctggcagtaagtgtgagatttatt
cagaaggatgcagaggagaggaaagtatcttttaatgcaaggccatatttcaggttgttc
attaactggctgcttgatctgggttccatggacccagtctttgatggtgcaaactttcag
gttttgatagcttttgcaaatgcatttcatgctctgcagccccttaaagttccgggattc
agcttcgcatggcttgagctggtaagtcacaggagtttcatgccaaaattgcttactgga
aacgctcagaagggttggccttatatgcagcgcttgctggttgacgtatttcaatttctg
gagccattcttgaggaatgctgaacttgaagagccggttcattttctgtataaaggcaca
cttagggtgttactagtgctacttcacgattaccccgagttcctctgcgattatcatttc
agtttctgcgatgtcattcctccgagctgcatacaaatgcgaaacataattctcagcgca
tttccccgtaatatgaggctaccagatccatctactccaaatttaaagattgatctgcta
gcagaaattagtcaacctccgcgtattctctctgaggttgatgcggctcttaaagcaaag
ctgattaagggtgatttagatgagtatcagaagacaaggcaacaggggtcttcattttta
acagaactgaagcagaaattgctgcttccaccaggcgatgctgctcgggctgggacccga
tataatgtaccactgatcaactctcttgtgctttatgttggaatgcaggctatacagcag
cttcaggcgagaactcctcctcatgcacagtcaatggccagtagcgttccattagctgcg
tttttagtcggtgctgccttggacatcttccagactttaattatggatcttgatactgag
gggcgttacctctttctaaatgcggttgctaatcaactacgctatccgaacaatcatacc
cattacttctccttcatccttctctacctatttgctgaatctaaccaggaaatcatccag
gagcaaataacaagagttctattagaacgactgattgttaaccgacctcatccgtggggg
cttttgattaccttcattgagttgattaagaatcctagatacaacttctggagccggtcg
tttacaagatgtgcaccagagattgagaaactgttcgaatcagtctcaagatcgtgtggg
ggcccaaagtccgtggatgagagtgtggtcacaggtgggatatctgacaacatgcactaa
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integrated database retrieval system
