KEGG   Actinidia eriantha (wild kiwifruit): 130796150
Entry
130796150         CDS       T09464                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130796150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aew03019]
    130796150
Messenger RNA biogenesis [BR:aew03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     130796150
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     130796150
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 130796150
NCBI-ProteinID: XP_057514433
LinkDB
Position
16:complement(1382289..1388201)
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEKACERVIVGDL
YCDIPLGLYIIRGENVVLIGELELDKEELPPHMTRVTEEEIKGAEKVEREATDLKGTMRK
RMEFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggacctgaagatatttatctttcaacttctcttgcaagctatctggat
aagaagcttcttgtattgctgcgagatggtagaaagctgttgggaatacttcgttcattt
gatcaatttgccaatgctgttctcgaaaaagcatgtgagcgagttattgtaggtgatctt
tattgtgacattccattaggtttgtacataatacgcggggagaatgttgttttaatcggc
gagctggaattggacaaggaagaacttccccctcatatgactcgtgtaacagaagaagag
ataaaaggggcagaaaaggtagaaagggaggctacagatctgaaaggtaccatgaggaag
aggatggaattccttgatatggactag

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