Actinidia eriantha (wild kiwifruit): 130796150
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Entry
130796150 CDS
T09464
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130796150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130796150
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130796150
mRNA degradation factors
5'-3' decay
Lsm complex
130796150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
130796150
NCBI-ProteinID:
XP_057514433
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Position
16:complement(1382289..1388201)
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AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEKACERVIVGDL
YCDIPLGLYIIRGENVVLIGELELDKEELPPHMTRVTEEEIKGAEKVEREATDLKGTMRK
RMEFLDMD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggacctgaagatatttatctttcaacttctcttgcaagctatctggat
aagaagcttcttgtattgctgcgagatggtagaaagctgttgggaatacttcgttcattt
gatcaatttgccaatgctgttctcgaaaaagcatgtgagcgagttattgtaggtgatctt
tattgtgacattccattaggtttgtacataatacgcggggagaatgttgttttaatcggc
gagctggaattggacaaggaagaacttccccctcatatgactcgtgtaacagaagaagag
ataaaaggggcagaaaaggtagaaagggaggctacagatctgaaaggtaccatgaggaag
aggatggaattccttgatatggactag
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