KEGG   Alcaligenes faecalis ZD02: UZ73_19105
Entry
UZ73_19105        CDS       T04157                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
afa  Alcaligenes faecalis ZD02
Pathway
afa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:afa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    UZ73_19105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afa03021]
    UZ73_19105
   03400 DNA repair and recombination proteins [BR:afa03400]
    UZ73_19105
Enzymes [BR:afa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     UZ73_19105
Transcription machinery [BR:afa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     UZ73_19105
DNA repair and recombination proteins [BR:afa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      UZ73_19105
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Biotin_lipoyl_2
Other DBs
NCBI-ProteinID: ALO40191
UniProt: A0A0M7ERA7
LinkDB
Position
complement(4221575..4225837)
AA seq 1420 aa
MKALLDLFKQVTQDEQFDAIKIGIASPEKIRSWSFGEVRKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTVSKVRRERMGHIELACPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAWCVIEPGMTPLKRGQIMSDDDFLAKTEEYGDDFHALM
GAEAVRELLRTIDIDREVERLRAELKATGSDAKIKKISKRLKVLEGFQKSGIKPDWMIME
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIILRNEKRMLQ
ESVDSLLDNGRRGKAMTGANKRQLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKLMALELFKPFIFNRLELMGLATTIKAAKKLVESQEPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEA
RTLMLASNNVLFPANGEPSIVPSQDIVLGLYYATRELVNGKGEGLFMADVAEVQRAYDNK
EVELQTRLTVRIEEFEKGEDGEWVKTIKRYETTAGRALLSEILPKGMPFTALNRALKKKE
ISRLINQSFRRCGLRATVIFADKLMQSGFRLATRGGISIAMNDMVVPAVKESILAQASNE
VKEIDKQYSSGLVTAQERYNNVVDIWGKAGDRVGKAMMEQLASEPVTNRFGEEVRQESFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVTQDLVITEDDCGTKGGYTMKAILDGGEVIEPLRDLIL
GRVASTDIVNPDNQELVIPAGTLLNEDLVDLIDNLGIDEVKIRTPLTCETRHGLCASCYG
RDLGRGVLVNRGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAALASSVETKTAGTVGF
EIGLRYVTNAKGERVAISRSGEIVIFDDNRRERERHKVPYGATITVGDGDAIKAGQRLAS
WDPLTRPIVSEYTGTVRFENIEEGVTVARQVDEVTGLSTLVVITPKTRGGKITMRPQIKL
LNEQGQEIKIAGTDHMVNISFPVGALITVRDGQQVSVGEILARIPQESQKTRDITGGLPR
VAELFEARSPKDAGLLAEVTGTVSFGKDTKGKQRLVITDLDGVSHEFLIPKEKQVLAHDG
QVVNKGEMIVDGPADPHDILRLKGIEKLANYIVNEVQDVYRLQGVKINDKHIEVIVRQML
RRVNIVDAGDTNFITGEQVERSELLNENDRVLAENGIPATYENVLLGITKASLSTDSFIS
AASFQETTRVLTEAAIMGKTDDLRGLKENVIVGRLIPAGTGMAFHSARKEKEAFEVAERK
AARELENPFASAPEPSEDPVFVSGASEPEQQPEAPEGDQE
NT seq 4263 nt   +upstreamnt  +downstreamnt
atgaaagcgctactcgatctctttaaacaagtcactcaggacgagcagttcgatgccatc
aagatcggcatcgcctcgcccgagaagatccggtcctggtctttcggagaagtccgcaag
ccagagaccatcaactatcgcacgttcaaacccgagcgcgatggcctgttttgcgccaag
atttttggtcccatcaaggactacgaatgtctgtgcggcaagtacaagcgcctgaagcac
cgtggcgtcatctgcgagaagtgtggcgttgaagtcaccgtctccaaggtgcgtcgcgag
cgcatgggtcacattgaactggcctgcccggttgctcacatctggttcctgaagagcctg
ccatcccgtctgggcatggtgctggacatgaccctgcgtgacatcgagcgcgtgctgtac
tttgaagcctggtgcgtgatcgaacctggtatgaccccgctcaagcgcggtcagatcatg
tccgacgacgatttcctggccaagaccgaagaatacggtgacgacttccacgccctgatg
ggcgcggaagccgtgcgcgaactgctgcgcacgatcgacatcgatcgcgaagtcgagcgc
ctgcgtgccgaactgaaagccacaggttcggatgccaagatcaagaagatctccaagcgt
ctgaaagtactggaaggcttccagaaatccggcatcaagccagactggatgatcatggaa
gtgctgcccgtgctgccaccggacctgcgtccgctggtaccactggacggcggccgcttt
gcgacttccgacctgaacgatctgtaccgccgcgttatcaaccgtaataaccgtttgaag
cgtctgctggaactgaaggctccggacatcatcctgcgcaacgaaaaacgtatgctgcaa
gagtccgtggactccttgctggataacggtcgtcgcggcaaggccatgaccggcgccaac
aagcgtcaactgaagtccctggccgacatgatcaagggcaagagcggtcgtttccgtcag
aacctgctgggcaagcgcgtggactactccggtcgttccgtgattgtggtgggtcctcag
ctgaaactgcaccagtgcggtctgcccaagctgatggcgctggaactgttcaagcctttc
atcttcaaccgtctggaattgatgggtctggctacgaccatcaaggcagccaagaagttg
gtggaaagccaggaaccggtggtgtgggacatcctcgaagaggtgatccgcgagcatccg
gtcatgctgaaccgtgcgcctacgctgcaccgtttgggtattcaggcttttgaaccggtc
ctgatcgaaggtaaagcgattcagctgcaccccctggtgtgtgccgcctttaacgctgac
ttcgacggtgaccagatggccgttcacgtgccgctgtcgctggaagcccagctggaagcg
cgcaccctgatgctggcctccaacaacgtgctgttccccgccaacggcgaaccatccatc
gttccttcccaagatatcgtgttgggtctgtactatgcgacccgcgaactggtcaatggc
aagggcgaaggcttgttcatggccgatgtggctgaagtccagcgtgcctacgacaacaag
gaagtcgagctgcaaactcgtctgaccgtccgtatcgaagaattcgagaagggcgaagac
ggtgagtgggtcaagaccatcaagcgttacgaaacgactgctggccgtgccttgctgtcc
gaaattctgcccaagggcatgccattcaccgcactgaaccgtgcgctgaagaagaaagaa
atttcgcgtctgatcaaccagtccttccgtcgctgcggcctgcgtgccaccgtgattttt
gcggacaaattgatgcagtccggtttccgtctggcaacacgtggtggtatttccatcgcg
atgaacgacatggttgtgcctgccgtcaaggaaagcatcctggctcaggcaagcaatgaa
gttaaagaaatcgacaagcagtactcgtccggtctggtgaccgctcaggaacgctacaac
aacgtggtggacatctggggcaaggcgggtgaccgagtcggcaaggccatgatggagcaa
ctggcttccgagccagtgaccaaccgttttggtgaagaagtacgtcaagagtccttcaac
tccatctacatgatggcggactccggtgctcgtggttcggctgcacagattcgtcagctg
gccggtatgcgtggtttgatggccaagcctgatggctccattattgaaacgcctattacc
gcgaacttccgtgaaggtctgaacgtactgcagtactttatttcgactcacggtgctcgt
aagggtctggctgatacggccttgaagacggctaactccggttacctgactcgtcgtctg
gtcgacgtgacgcaagatctggtcattaccgaagacgattgcggtaccaagggcggctac
accatgaaagccatcctggatggtggtgaggttatcgagcccctgcgcgatctgattctg
ggccgtgtggcctcgaccgacatcgtcaaccctgacaatcaggaactggttatccccgcc
ggcaccttgctgaacgaggacctggtcgacctgatcgacaatctgggtattgatgaagtc
aagatccgtactccgctgacttgcgaaacccgtcacggcttgtgcgcaagctgctacggt
cgcgatctgggtcgtggtgtgctggttaaccgtggtgaagccatcggtgttatcgctgct
cagtccatcggtgaaccgggtacccagctgaccatgcgtacgttccacattggtggtgcg
gcttcgcgtgcagcgctggccagctcggtggaaaccaagacggctggtacggtcggtttt
gaaattggtctgcgctatgtgaccaacgccaagggcgagcgtgttgcgatctcccgttcc
ggtgaaatcgtcatttttgacgacaaccgccgcgagcgcgaacgtcacaaagtgccttac
ggcgccaccatcacggtgggcgatggcgatgcgatcaaggctggccaacgtctggcaagc
tgggatccgctgacccgtcctatcgtgtccgagtacaccggtaccgttcgcttcgagaac
atcgaagaaggcgtgaccgtggctcgtcaggtggacgaagtgaccggtctgtcgactctg
gttgtgatcactcccaagacacgtggtggcaagatcaccatgcgtcctcagatcaagctg
ctgaacgagcaaggtcaggagatcaagatcgcgggtaccgatcacatggtcaatatctcc
ttcccggtgggcgcgctgattaccgttcgcgacggccagcaagtgtctgtgggtgagatt
ctggcgcgtattcctcaggaatcgcaaaagactcgggatattaccgggggtctgccacgt
gtggccgaactgttcgaagctcgttcgcccaaggacgccggtctgctggccgaagttacg
ggtacggtttccttcggtaaagacaccaagggcaaacagcgtctggtcattaccgacctg
gacggcgtcagccacgagttcctgattccgaaggaaaaacaggttctggctcacgacggt
caggtggtgaacaagggcgagatgattgtggacggcccagccgatccgcacgacatcctg
cgcttgaagggtatcgagaagctggccaactacattgttaacgaagtgcaggacgtttac
cgtctgcaaggtgtgaagatcaacgacaagcacattgaagtgattgttcgtcagatgctg
cgccgcgtgaacattgtggatgctggtgataccaacttcatcacgggtgaacaggttgaa
cgctccgaactgctgaacgagaacgatcgcgtcctggctgaaaacggtatccctgctacg
tacgaaaacgtgctgctgggtattaccaaggcctcgctgtcgaccgactccttcatctcg
gcggcttccttccaggaaaccacccgcgtgttgaccgaagcggccatcatgggcaaaacc
gacgatctgcgtggtctgaaagaaaacgtgattgtgggtcgtctgattcctgctggtacc
ggtatggccttccattccgcccgcaaggaaaaagaagcctttgaagtggcagagcgcaaa
gcagcccgtgaactggaaaacccgttcgcatcggctcctgagccttcggaagatccggtc
tttgtgtccggtgcctccgagcccgagcagcaacctgaagccccagaaggcgatcaggaa
taa

DBGET integrated database retrieval system