Anoplopoma fimbria (sablefish): 129089979
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Entry
129089979 CDS
T09102
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A
KO
K23720
UV-stimulated scaffold protein A
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
129089979 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129089979 (uvssa)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
129089979 (uvssa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
129089979
NCBI-ProteinID:
XP_054453404
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All DBs
Position
4:3820361..3858347
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AA seq
735 aa
AA seq
DB search
MELSQRDRLSELVEQLTTSGEPQLNQDRMKEIKKICKVSNDCIDHVYHSVISQLNQEHAE
VRLSAFQIASELFSRSHHFRTLLVDNFQEFLELTVETDSEQPLPPPKDVARKLRSLAIQT
FHSWQASYGAAYKKLALGYHFLKQVKKVDFQDAEARTVAERRREEERQRKMERIYKERVE
AASKDMEDSIQEIEDTLTEMESCMSLLFPEFDLDIQTTHCSPHSSKPADEGPSAEEQPCC
SKYLKDESREGMMQKKEESREEKKSNLEVQKEEEEEEEEEEEEEESSEEEEGESLDESLF
IRNSGLISHAYSLDLNLNPDLRVKETEDNEAVVSTVKDLHRLLTNKHLPAVQGWVQVFTK
SGAEQQLLRRALDLKRSLEATLQKHQELHIDYKTRVRRVMKAASDGEEDDDDDDDDDFDE
VPEKEGYEPHIPQHLRAEYGLDPAPSTSTAPKKAPPALSSSSFSSSSSQRLKRLTEEDQD
PTCAAATLRHFKQNLPLPAQSSISSSGPSSSQSSSDQKAVDAPVVPFGLDLYYWGQEQPN
AGKIVKMTSQHQFWVPFDVDEEVENKELLAESRSRYISFPGSFTPVNHYCSAPLGNGKLC
QRQDRLKCPFHGLIVPRDPEGRPCRPEDRLREEQEKWRKNEEQPDWRDAEFMRDIEAATG
EDLGSDRIGKKGKGRRKKKKYPNLSDLKQSANTARSRLEKKVLNKSSMRRVAEVMAKADM
RKHDKFSNQFNYALK
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtctcagagggacaggctgtcggagctggtggagcagctgaccacatcagga
gaaccgcagctcaaccaggacaggatgaaggaaatcaagaagatctgcaaagtgtctaac
gactgcatagaccacgtgtaccactcagtgatatctcagctcaaccaggaacatgctgag
gtccgactgtctgccttccagatagccagcgagctcttctccagatcacaccactttaga
acactcctggtggacaacttccaggagttcctggagctgacagtagagactgactcagaa
cagccccttccccctcctaaggacgtggccaggaaactccggtcactggccatccagact
ttccattcatggcaggcctcttatggggcagcttataagaagttagcactgggctaccac
tttctcaaacaggttaagaaggtggacttccaggatgctgaggccaggacagtagcagag
aggaggagggaggaggagagacagaggaaaatggagagaatctacaaggagagagtggaa
gcagcctccaaagacatggaggactcaatccaggaaattgaggacacattgacagagatg
gaatcctgcatgagcctgcttttccccgagtttgacctagacatccagaccacccattgc
agccctcacagctccaaaccagccgatgaaggtccatcagctgaggaacagccctgctgc
agcaaatacctgaaggatgaaagcagagaaggaatgatgcagaagaaggaagagagcaga
gaagaaaagaaaagcaatttggaggtacagaaagaagaagaagaagaagaagaagaagaa
gaagaagaagaggagagtagtgaagaagaggagggggagtctcttgatgagagcttgttt
attcggaactctgggctcatctctcacgcctacagtctggacctgaacctcaatcctgat
cttcgtgtgaaggagacggaggacaatgaggcggtggtttccacggtgaaagacctccat
agactcttaacaaacaaacacctaccagctgtgcagggctgggtccaggtctttaccaag
tcaggtgcagaacagcagctgttaaggagggcgctggatctgaaaagatctttagaagct
accctgcagaaacaccaagagcttcacatcgattataagaccagggtccgcagagtgatg
aaggctgcttcagacggagaggaagatgatgatgatgatgatgatgatgatttcgatgag
gttccagagaaagagggatatgagccgcacattccacagcatctaagggccgagtatggt
ttggatccagctccttccacctcaacagcaccaaaaaaagctccaccagctctgtcttcc
tcatccttttcctcttcctcctcccagcggctgaagcgactaacagaggaggatcaggat
ccaacatgtgcagctgccacactgcgccacttcaaacagaacctccctctgcccgcacaa
tccagcatcagctcctcaggtcccagttcatctcagtccagctcggaccagaaggctgtc
gatgctcctgtggttccatttggtttggacctgtactactggggccaggagcagcccaac
gctggcaagatcgtcaagatgacctctcagcatcagttctgggttccctttgatgtggac
gaggaggtggagaacaaggagctcctggcagagagcaggagtagatacatctccttccct
gggagcttcactcctgtcaaccattactgcagtgctccactgggcaacggaaagctatgt
cagagacaggaccgccttaagtgtcctttccatggtctgatcgttccccgagacccggag
gggcggccctgcaggccggaggaccgactaagggaggagcaggaaaagtggaggaagaat
gaggagcagcctgactggcgtgatgcagagtttatgcgagacatcgaggcggcaacaggg
gaagacctgggttccgacaggatcggtaaaaaagggaaagggaggaggaagaagaagaag
taccccaacctcagcgacctgaagcagagcgccaacacggcccgctccaggctggagaaa
aaagtactcaacaagagcagcatgcgcagagtagctgaggttatggctaaagctgacatg
agaaaacatgacaagttctccaaccagttcaactatgccctcaagtga
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integrated database retrieval system
