Anoplopoma fimbria (sablefish): 129090116
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Entry
129090116 CDS
T09102
Symbol
rapgef2b
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04517
IgSF CAM signaling
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129090116 (rapgef2b)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129090116 (rapgef2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129090116 (rapgef2b)
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GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
PDZ_6
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129090116
NCBI-ProteinID:
XP_054453612
LinkDB
All DBs
Position
4:21831536..21936330
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AA seq
1626 aa
AA seq
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MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPIDRGYHTLPADF
SRLHLADGLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATENEPGDMDLSGLPETAVDS
EEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRR
ELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEGRTEILCMGNSFGVSPTM
EKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGT
RKGHIVIKGTSERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGKKLLEWFHDPSL
RDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFESNLEKEKMCGHLRLLNIACAAKAKPRL
VTLTKPSRDSPLAFSLLGGQEKGFRIFIDAVEPGSKAAEVGLKRGDQILEVNGQNFENVQ
LNKANEILKNNTHLSITVKTNLLVFKELLTRPEHDHEVDGEEEHDRKNGAPHLPKIGDIK
KASRYSIPDLAVDVEQVMGLEKVSKKAKSNSVGGRNKLKKIFDKTLTSILPPKPYNDVCV
GQSQDDSIVGMKQSKQIAPALPVSGNLSSSNPDLLQSHHRILDFNNQPDMSDQVLRVFKA
DQQSRYIMIGKDTTAKEVVAQAIREFALTAAPEAYSLCEVSVTPEGVIKQRRLPDQLSKL
ADRIQLSGRYYLKSNMETETLCSDDDAQDLLREGQISLLQLSTVEVATQLSMRAFELFCA
IEPTEYIDDLFKLRSKTGSASLKRFEEAINHETFWVATEVTREPNQIKRMKNVKHFIKIA
LHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLFDPSRNMAKYRN
VLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMASVNM
DPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNAKKLYEDAQMAR
KVKQYLSNLSLETNEESLQTLSMQCEPSISTLPKNAGGKRPDTSPVVSRAASQQRGQLAK
GNQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEGNERHRRQPEDTVSNA
SSQLSSPPTSPQSSPKKGYNRMGDAYSDSGHSEISSRSSLVSNSSFDMAQDERRLRHSGG
VGETHIGGQRLERRATTDPDQYSLGSYSSMQDCRGIYTGCPTVLSSPSSEELTQDQGDRV
SLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGGGRWRRGAPSSGQEALLG
GHAALWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADPETSSITSTGS
EEAKQLGRPSPSPITTGGKGILTRKESRYREPPRLPGYTALTISDLAEGQHPAPSVPTST
ATHTGRRPPDYTTALQRSRMVTQSPDSHQAQQGAKQRAGGLHRTRSPAEEHEAEEEEEED
EQVSAV
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacgtggataacagctttcggcaggctgtgatgatgaatccggctgagagg
acgcaacaggacctggagatcgtctactcgtatctccacgggatggaggccttgtccaac
ctgcgagagcaccagctgaggataatgtgcgagacggtgcgttatgagagacatgaggcc
aatgaagtgctgtactaccctgacgacatcggaagctgctggtacatcctgttgtccggc
tccgtcttcatcaaggagtccatgttcctgcccagaagcagttttgggaagcgatcagcc
ggcagcctgcggcgtggatgtgagtgcatcgtcctggaaccctcagagatgattgtggtg
gactatatggatgaaaatgaggagtacttccagcggcaagcctcgcacagacagtcccgt
cggcgctttcggaagatcaaccagaagggggagaggcagacgatcatcgacaccgtggat
ccgtaccccaccgggaagccgcccatagaccggggataccacacgctccccgcagacttc
agcagacttcacctggccgacggcttgcacccacaggtgacccacgtctcctccagccac
tcaggatgtagtatcaccagcgactctggaagcagcagcctgtcagacatttatcaggcc
acagaaaacgaaccaggtgacatggacctgagcggcttgccagagaccgccgtcgactcc
gaggaggacgacgatgaggaggacatcgagcgagcgtccgaccccctcatgagccgggac
atcgtgcgggactgcctggagaaggaccccatggacagaaccgacgacgacatagagcaa
ttactggagttcatgcatcaactgccagcgttcgccaacatgaccatgtcggtgaggagg
gaactctgcgccgtcatggtgttcgccgtggtcgagcgcgccggcaccatcgttctcaac
gatggagaggagctggactcgtggtccgtgatcctgaacggttcggtggaggtgacgtac
cccgagggccggacagagatcctgtgtatggggaacagtttcggggtgtcaccaaccatg
gagaaggaatacatgaagggcgtgatgaagaccaaggtggacgactgccagtttgtgtgc
atagcccagcaggactactgctgcatcctcaaccaggtggagaagaacatgcagaaggtg
gaggaggaaggcgagatcgttatggtgaaggagcacagagaactggaccgcaccggcacc
aggaaaggacacatcgtcatcaagggcacatcggagcgtctcaccatgcacctggtggag
gaacactcagtggtggaccccacctacatcgaggacttcctgttgacctacaggaccttc
ctctccagccccatggtcgtgggcaagaagctcctggagtggttccacgaccccagtctc
agggacaaggttacacgggtagtcttgctgtgggtaaacaatcacttcaacgactttgaa
ggcgaccctgccatgactcactttctggaagagttcgaaagcaatctcgagaaagaaaaa
atgtgcgggcacctcagactgttaaacattgcgtgtgctgctaaagccaagccgcggctg
gtgacgctgaccaagccgtccagggactccccgctggccttcagcctcctcggggggcag
gagaaaggtttccgcatcttcatcgatgccgtggagcccgggagcaaggcagcagaagtc
ggccttaagcgtggggatcagatcttggaggtcaatgggcagaactttgagaatgtccag
ctcaacaaagccaacgagattctgaagaacaacacccacctgtccataactgtgaaaaca
aaccttttagtgtttaaagagctgctaaccaggccagaacatgaccacgaggtggatggc
gaggaggaacatgaccggaagaacggcgcgccccacctcccaaagatcggagacatcaag
aaggccagccgctactccatccccgacctggcagtggacgtggagcaggtgatgggcctg
gagaaggtcagcaagaaagccaagagcaactcagtgggaggacgcaacaagctgaagaag
atcttcgacaagacactcaccagcatcctgccgcctaaaccatacaatgacgtttgcgtg
ggccaatcgcaggacgacagcatcgtggggatgaagcagtccaaacagatcgcaccagcg
ctgcccgtcagcggaaacctctcctcgtcaaacccggacctcctgcagtcccaccaccgc
atcctcgacttcaacaaccagcctgatatgtcggaccaggtattacgagtcttcaaggcc
gaccagcagtctcggtacatcatgatcgggaaggacacaacggctaaggaggtggtggcc
caggctatcagggagtttgccctgactgcagcaccggaggcttattctctgtgcgaggtg
tccgtcacaccggagggcgtcatcaagcagaggcggttaccggaccagctgtctaaactg
gccgacaggatccagctgagtggcagatactacctaaagagcaacatggagacggagacg
ttgtgttccgatgacgacgcccaggacctcctgagagagggccagatctctttgttacag
ctcagcacggtggaggtcgccactcagctctccatgcgggcctttgaactgttctgcgcc
atcgagcccaccgagtacatcgacgacctgttcaagctgcgctccaagacgggctcggcc
agcctgaagcgcttcgaggaggccatcaaccacgagaccttctgggtggccacggaggtg
acgcgggagcccaaccagatcaaacgcatgaagaacgtcaagcacttcatcaagatcgcc
ctgcactgccgcgagtgcaagaacttcaactccatgttcgccatcatcagtggtctgaac
ctggctccagtctccagactgaggggaacatgggagaagctacccagcaagtacgagaag
ctgttcggggacctgcaggacctcttcgacccctccagaaacatggccaagtacaggaat
gtcctcaacaatcagaacctccagccaccgatcatccccctgttccccgtcatcaagaag
gacctcaccttcctacacgaaggcaacgactctaaagtggacggcctggtgaactttgag
aagctgaggatgattgccaaagaaattcgccacgttggtcgcatggcctccgtcaacatg
gacccggccctcatgttccggacccggaagaagaagtggaggagtttagggtccctaagc
cagggaagcgccaacgcggcggtgctggacgtcacacagaccggcgggcacaagaagagg
gtgcgacgcagctccttcctgaacgccaaaaagctttacgaggacgcccagatggcccgg
aaggtcaagcagtacctgtccaacctcagcctggaaaccaacgaggagagcctgcagacg
ctctccatgcagtgcgagccctccatcagcacattgcccaagaatgccggtgggaaacga
ccagacacctccccggtcgtgtccagagcggccagccaacagaggggccagctggccaaa
ggaaaccaggccctccaggtccccgctgtggccctctacccatcccggaagaaagtgcca
gtcaaggatctgccaccttttggcaccagctcccctcagtcgctgaagaagatcctgtct
ctgtcggaggaggggaacgaaaggcaccgcaggcagccagaggacaccgtgtccaacgcc
tcctcccagctctcctcccctcccacctccccacagagctcacccaagaagggttacaac
aggatgggagacgcctactcggactccggtcacagtgagatctcctcccggtccagcctc
gtcagtaactcctccttcgacatggcccaggacgagaggaggctccgtcactctggagga
gtcggggaaacgcacatcgggggccagcggctggaacggagggccaccaccgaccccgac
cagtacagcctcgggtcgtattcatcgatgcaggactgtcggggcatttacaccggctgc
cccacagtgctctcctcgcccagttcagaggagctgactcaggatcagggcgatcgtgtt
tccctcgatgctgcagacagcggccgcggctcctggacttcctgctcctccggttcccac
gacaacatccagaccatgcagcaggggcgcagctgggagactctggcttttggcggaggt
ggaggtggagggcggtggcgtcggggggctccctccagcggacaggaggccttactaggg
ggccacgctgcattgtgggccgcccaggccagggggagctgggcgtcggccagctcctcc
tcatcctcagcggcgtactggggagaggactctgagggagacaccggcaccatcaagagg
aggggagggaaggacgtcaacgccgacccggagacaagtagcatcacatccaccgggtca
gaggaggccaagcagctgggccgaccctccccgtcacccatcaccaccggcggtaaaggc
atccttacgcggaaagaaagccgttatcgcgagcctccccgactccccggctacaccgcc
ctgaccatctccgacctcgccgaggggcagcacccggccccgtctgtccccacgtccacg
gccacccacacgggccgccggccgccagactacaccacggctctgcagcgctcgcgcatg
gtcacccagtcgcccgactcccaccaggcccagcagggggccaagcagcgggcgggcggc
ctccaccgcacgcgctcgccggccgaggagcatgaggcggaggaggaagaggaggaggat
gaacaggtgtcggcggtctga
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