Anoplopoma fimbria (sablefish): 129099052
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Entry
129099052 CDS
T09102
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129099052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129099052
Membrane trafficking [BR:
afb04131
]
Endosome - Golgi transport
Others
GGA
129099052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
GAT
Alpha_adaptinC2
GGA_N-GAT
RsbU_N
ImmE5
Cytochrom_C_2
PCRF
Hrs_helical
FliT
Motif
Other DBs
NCBI-GeneID:
129099052
NCBI-ProteinID:
XP_054464194
LinkDB
All DBs
Position
11:23384316..23393213
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AA seq
659 aa
AA seq
DB search
MAAPPDAESLESRINRATNPLNRDTDWSSINAFCDQLNNDLEGPQLATRLLAHKIQSPQE
WEAMQALLVLETCMKNCGKRFHSEVGKFRFLNELIKVVSPKYLGSRSPEPVKKKVLELIF
SWTLGLPDEAKISDAYQMLKKQGIIKQDPELPPDKLLNLPPPRPKNAIFEDEEKSKMLSR
LLNSSHPEDLKAANKLIKEMVQEDQKRAEKVSKRVNAIQEVNESVSLLTQLLQDYDGTAD
NQQNAELLQDLYQRCEKMRPTLFRLASDTEDNDEALAEILQANDSLTQVINQYKQQVKGE
IVNANNTLNTQRTTGGGTALLDLSGLDTSPQSPPSFPEFPTPTDSLNAPSQEMGISLLDD
ELMSLGLSEGTHTSNPHSQPEDSTAWDSFQSSDSIDTDIPAAPSLLLSPDPPSYSQPLSS
GSTPGNSALDELDLLGKTLMQQSLPPEGLQVKWDKQQCKPTLRDLQSKSVCNVTPNPIPT
FAVEHPAPLLNSQPGPAATLLDMSPTHTETPSADFTLTDVFVPLESIKPSSLLPVTVFDG
HSLRVLFHFARDSPPSRPDVLVVIISMLSSAPVPVSNINFQTTAPKPMAVKLQPPSGTEL
PAFNPILPPAAVTQILLLANPNKEKVQLQYSLTFTMGEQEHSESGSLEQFPPPETWGNL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgccgcccgacgcggagagtttggagtctcgtatcaacagagccacaaaccca
ctcaacagagacacagactggagcagcatcaatgctttctgtgaccagctcaacaatgac
ttggagggtcctcagcttgccaccaggctcctggcccacaagatccaatctccacaggag
tgggaggccatgcaggcactgctggttctggagacgtgtatgaaaaactgtgggaaaagg
tttcacagtgaagttggcaagttccgttttcttaatgaactcatcaaagtagtttctcca
aagtacctgggctcacggtcaccagagccagtgaaaaagaaggttttggagttgatcttt
agctggactttggggttacctgatgaggccaagatctcagatgcctatcagatgctgaaa
aaacaaggtattattaaacaagacccagagctgccacctgacaaactgctgaaccttccc
ccacccagacccaagaatgccatttttgaggatgaggagaagtcaaagatgttgtcccgc
ctgttgaatagctcgcaccctgaggacctaaaagctgccaacaaactcatcaaggaaatg
gtccaagaggatcagaagcgagcagagaaggtttcaaagcgagtgaacgctattcaggag
gtgaatgagagcgtcagtctgctgactcagcttctgcaggactatgacggcaccgccgac
aatcagcaaaacgctgaactattacaggatctgtaccagcgctgtgagaaaatgagaccg
acactgttcagactggcaagtgatacggaggacaacgacgaggctctggctgagatcctg
caggcaaacgacagcctgactcaggtcatcaaccagtacaaacagcaggtgaagggggag
atagtgaacgccaacaacacattaaacacacagaggacaacaggaggagggacggcactg
ctagatctgtcaggattggacacatcaccacagtcgcctccgtccttcccagagttcccc
accccaacagacagcctcaacgccccttcgcaagagatggggatcagtctcctggacgac
gagctcatgtcactcggtctaagtgaaggaacacacacctccaaccctcactcacagcct
gaggactccaccgcatgggactccttccagtcctctgacagcatagacacagacatccca
gcagcacccagtctcctcctgagtccagaccccccctcctactctcagccactttcgtct
ggctccacccccgggaactcggccctggacgagctggacctgctgggaaagacgctgatg
cagcagtccctgcctccagagggcctgcaggtcaaatgggacaagcagcagtgtaaacca
actctgagggatctgcagagcaagtctgtgtgcaacgtcaccccaaaccccataccaacc
ttcgccgtcgaacatcccgcacctctcctcaactctcagcccggccctgcagcgacgttg
ctggatatgtccccgactcacaccgagacaccgtctgcagacttcaccctgactgatgtt
tttgtaccgctagaatccattaagcccagtagtctgttacctgtgactgtgtttgacgga
cacagtctgcgggttctctttcacttcgctcgggactcgcctccctctcgtcccgatgtg
ctggtggtgatcatctccatgttgtcatccgctcccgtccccgtcagtaacatcaatttc
cagaccacggctccaaagcctatggcagtgaagcttcagcccccatcaggaacagagctc
ccagcgttcaaccccatccttcctcctgctgctgtcacacagatcctgctgctggcaaac
ccaaacaaggagaaagtgcagctgcagtacagtttaaccttcaccatgggagagcaggag
cacagcgagagcggcagtctagaacagtttcctcctccagagacgtgggggaacctatag
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