Anoplopoma fimbria (sablefish): 129105283
Help
Entry
129105283 CDS
T09102
Symbol
tsen2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129105283 (tsen2)
Enzymes [BR:
afb01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
129105283 (tsen2)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
129105283 (tsen2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
129105283
NCBI-ProteinID:
XP_054472195
LinkDB
All DBs
Position
17:complement(27872363..27878485)
Genome browser
AA seq
417 aa
AA seq
DB search
MQAEFKAPRRRRRVYEELQAPLPVSSRPEDSTDYRAELLNQHVVVCHQDHIQKIYSQGYF
GKGVLSRARPDYSISDQWEQHEGLSLPVISQSRYEELLRWAGSALSAQGLDEDAVNQTLL
SISQPVEMEDVRSEMRGGGEPGPNGGACPHTKRPWPGSGVEPEAKKSCRLGPQNHDPDPS
SDQDPDLDPDPSSDQDSDLNSDSDSDPAPAPDPLVPGPGFVLVVSDSEVCGAVREVRRTP
FSLTEYLQLSLEEAFFLVYSLGCLSVYQNQEPLSIIQLWRTFRSLRPDFVSSFAAYQHCR
SSGWVPKEGGGAKYGVDLMLYRKGPPFYHASYSVVIERTDDAFRGSALRPFSWRSLAALS
RITSNVSKELMLCYVIHPADLSEAELDSPVCLSRLKVQKVIVSRWVSSRERAEQEDI
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggagtttaaggccccgcggaggcgcagacgggtctatgaggagctccaggcc
ccgctgccggtgagcagcaggccggaggacagcaccgactaccgggcagagctcctcaac
caacacgtggtggtctgtcatcaggaccacatccagaagatctacagccagggttacttt
ggtaaaggggtcttgtccagagccagaccggactacagcatctctgaccaatgggaacaa
catgaaggtttgtctctacctgtcatctcacaatccaggtatgaggagctcctcaggtgg
gcgggttccgctctctctgctcagggattggatgaagatgctgtcaatcaaaccctgctc
agcatctctcagccagtagagatggaggatgtgaggagcgagatgagaggcggaggggag
cctggaccaaatgggggagcctgtccccacacaaagaggccgtggccggggtcaggggtc
gagccggaggccaagaaaagctgcaggttgggcccacagaaccacgaccctgatcccagc
tcagatcaggaccctgacctagaccctgatcccagctcagaccaggactcggacctcaac
tctgactctgactctgatcctgctcctgctcctgatcctttggttcccggtcctggtttt
gtcctagtggtctctgacagtgaggtgtgtggggccgtcagggaggtccggcggactccg
ttctctctcacagagtacctgcaactcagtctggaggaggccttcttcctggtctacagt
ctgggctgcctgtctgtctaccagaaccaggagcccctgtcaatcatccagctgtggaga
acattccgctccctgcggcccgactttgtgagctcgtttgcagcctatcagcactgtcga
agcagcgggtgggtccctaaagaagggggcggggccaagtacggcgtggacctcatgttg
tataggaaaggaccacctttctaccacgcaagttattcggtcgtaattgagcggactgat
gatgcgttcaggggctcggcattgcgtccgttttcgtggcgttctctggcggctctcagc
aggatcacctccaacgtctccaaggagctgatgttgtgttacgtcatccatccagccgac
ctatcagaagctgagctggactcacctgtctgtctgagcagactgaaggttcagaaagtg
atcgtcagcaggtgggtttcctccagggagcgagcggagcaggaagacatctga
DBGET
integrated database retrieval system
