Anoplopoma fimbria (sablefish): 129105531
Help
Entry
129105531 CDS
T09102
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129105531 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129105531 (slc6a11b)
Transporters [BR:
afb02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
129105531 (slc6a11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
129105531
NCBI-ProteinID:
XP_054472581
LinkDB
All DBs
Position
17:complement(18992860..19014994)
Genome browser
AA seq
611 aa
AA seq
DB search
MTAEKSGPVINGKPEDGKDPEGSSSSLEAGQYNERGHWNNKIEFFLSVAGEIIGLGNVWR
FPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYA
TQVIEAHLNVYYVVILAWAIFYLFNCFTTELPWAACGHYWNTENCVDFYGENATNITNPN
ATSPVIEFWERRVLKISDGIEHMGGMRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTA
TFPYVMLLVLLIRGVTLPGAYDGIKFYLYPDMSRLSDPQVWVDAGTQIFFSYAICLGCLT
ALGSYNSYNNNCYRDCLMLCCLNSGTSFLAGFAIFSVLGFMAYEQNVPIEAVAESGPGLA
FIAYPKAVTMMPLSPLWACLFFMMLIFLGLDSQFVCVESLVTAVVDMYPETFRRGYRREL
LILGMSIVSFFIGLIMCMEGGMYVFQLFDAYAASGMCLLFVAIFESICIGWVYGSDRFYT
NIEDMIGYKPVFFIKWCWMILTPGICAAIFLFFLIKYKPLKYNNVYTYPDWGYGIGWFMA
MSSMVCIPLGMIYMIWKTPGTFSERIKKLTTPSPDLKMRGKLAALSPYAANDAKLKVDGK
ISTVSEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagaagagcgggcccgttataaacggtaaaccagaggatggcaaagacccg
gaagggtcctcttccagcctagaagctgggcagtacaatgagaggggccactggaacaac
aagattgagtttttcctgtctgtggctggagagatcatcggtctgggcaacgtctggagg
tttccttacctctgctacaagaatggaggaggtgctttcttcgttccatacgtcatcttc
tttgtgtgctgcggtatccctgtgtttttcctggagactgcccttggtcagttcaccagt
gagggaggcatcacctgctggaggaaagtctgcccgctatttgaaggaattggttatgca
acgcaggtgattgaagcccatctcaacgtgtactatgtagtgatccttgcctgggccatc
ttctacctcttcaactgcttcaccaccgagctgccgtgggctgcctgtggacactactgg
aatacagagaactgtgtcgacttctatggagaaaatgccaccaacattacaaaccccaat
gcaacatctccagtcattgagttttgggaacgcagagtactgaagatttcagatggtatt
gagcacatggggggaatgcgctgggagctcgccatgtgccttgccctggcctggttcatc
tgctacttctgcatctggaagggacccaagtcaactggcaaggttgtgtatgtgacagct
acatttccttacgtcatgttgttggtcctgctgatcagaggagtgactctgccaggagca
tatgacggcatcaagttctacctctacccggacatgtcacgtctctctgaccctcaggtg
tgggtggatgctggaacccaaatcttcttctcctatgctatctgcttgggctgtctcact
gctctgggaagttacaattcctacaacaataactgctacagggactgcctcatgctctgc
tgtctgaacagcggcaccagctttttagcaggttttgctatcttctctgtgctgggcttc
atggcctacgaacaaaatgttcccatcgaggctgtggcagaatctggtcctggtcttgca
ttcattgcttacccaaaggctgttactatgatgcctctgtctccactttgggcctgtctc
ttctttatgatgctcatcttcctcggtctggacagtcagtttgtgtgtgtggagagttta
gtgacagctgtggtggacatgtacccagagacctttaggagaggctaccgcagagagctg
ctgattctgggcatgtctatagtctccttcttcataggactcatcatgtgtatggaggga
ggaatgtacgtcttccagctgtttgacgcgtacgctgccagcgggatgtgtttgctgttt
gtggccatatttgagtccatatgtattggctgggtgtatggtagtgacagattctacaca
aatattgaggacatgattggctacaaacctgtcttcttcatcaaatggtgctggatgatc
ctgaccccgggcatctgtgctgcaattttcctgttcttcttgattaaatacaagccgctg
aagtacaacaacgtgtacacataccctgactggggctacggtatcggctggttcatggcc
atgtcctcgatggtctgcatccctctgggtatgatctatatgatctggaagactcctggc
accttctctgagagaataaagaagttgacgactcccagcccagacctgaaaatgagaggg
aagctcgccgccctcagtccttatgctgccaatgatgcaaaacttaaggttgatgggaaa
atatccaccgtctcagaaaaggagacacatttctaa
DBGET
integrated database retrieval system
