Anoplopoma fimbria (sablefish): 129105765
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Entry
129105765 CDS
T09102
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00450
Selenocompound metabolism
afb00970
Aminoacyl-tRNA biosynthesis
afb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
129105765 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129105765 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
afb01007
]
129105765 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129105765 (mars1)
Enzymes [BR:
afb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
129105765 (mars1)
Amino acid related enzymes [BR:
afb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
129105765 (mars1)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
129105765 (mars1)
Prokaryotic type
Other AARSs
129105765 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_C_2
GST_C
Anticodon_1
Motif
Other DBs
NCBI-GeneID:
129105765
NCBI-ProteinID:
XP_054472924
LinkDB
All DBs
Position
17:complement(19821625..19840232)
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AA seq
929 aa
AA seq
DB search
MKLFVSEGNPHCLKVLSALEVTGVKCDVQYVNHEEKVVPFLSRPALPALLLPSGLHLFSP
NAICRYLFEVSGQDSSELCNQWLEWEATDLQPALLQCLHMAVLQGKGSEVSKVLQGPLNY
MEQSLSKRNTPYLTGEAVSVADVVLWAALYPVLSDSSLALGERTSVKAWFDRGAVMHSCQ
SAAQKVLQGKGLQGMKCFMQRQPAPQSSQCRDTQPCNSNPAEAEESERVVSVEEMEAAAQ
TWSKGLNTCPVATDRQHPILPQEGKRNLLVTSALPYVNNVPHLGNIIGCVLSADAFCRYG
RLRGWNVLFICGTDEYGTATENKAREEGLTPQQICDKYHAIHANIYKWFQIDFDFFGRTT
TEKQTEIAQDIFWRVHKHGFLMEDTVEQLRCENCLRFLADRFVEGICPNCNYPEARGDQC
DKCGRLINAVELREPQCKVCKQTPVVRSSKHLFLDLPKLEAQLEKWLDKSTSTGDWTANA
KQITRSWLRDGLKPRCITRDLRWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTDQWEK
WWKNPNQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLIATEYLNYEDTKFSKSR
GVGVFGDMAKDTGIPPDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNLGNFINRAG
MFVTKFFEGSVPVMELQQEDKRLLALVGWELQQYIQLLDKVKIRDALRHILNISRHGNQY
IQVNEPWKKIKGGDTERQRAGTVTGVAVNVACLLSVMLMPYMPAVSQTIRDQLNAPPSCV
NTMLQGTGSFVCCLSAGHRIGTVSPLFQKLETDQIEALKKRFGGQQPEDEPPKKKTAVQS
AGSTQPAAVPAPAAVTAEVASANGVDPERAKQLTQAVTEQGEKVRALKAQKAEKAVITAE
VTKLLDLKKQLAVAEGKSPEPAPQKGKKK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgttcgtcagtgaaggcaacccgcactgccttaaggtgttatctgctctagaa
gtgactggagtcaaatgtgacgtccagtatgtcaaccacgaagagaaagtggtgcccttc
ctcagccgtccagccttgccagccctgctcctgcccagtggtctgcaccttttcagcccg
aatgccatctgccgatacctgtttgaagtaagtggacaagactccagtgagctttgcaat
cagtggcttgaatgggaggccacagatcttcagcctgcactgctacagtgccttcacatg
gcagtgctgcagggaaaaggatcagaggtgtccaaggtcctccaagggcccctaaactac
atggagcaaagcttgagcaagaggaacacgccatatttaactggggaagctgtttcagtt
gctgatgttgttttgtgggctgcgctgtaccccgttttatctgactcttcgctagcattg
ggcgagcgcacgtctgttaaggcttggtttgaccgcggggctgtcatgcacagttgccag
tctgctgctcagaaagtgctgcagggaaaaggcctgcagggcatgaagtgcttcatgcag
aggcagcctgcccctcagagcagccagtgcagagacacgcagccatgcaacagcaaccct
gctgaggctgaggaaagtgagcgtgtggtgtcggtggaggagatggaggcagctgctcaa
acctggagtaaaggtttgaacacctgtccagtggctacagacagacagcatcccattttg
ccacaggagggcaagcggaacctcctcgtgaccagtgccttgccttatgtcaacaacgtc
ccccacctgggcaacatcatcggctgcgtcctcagcgctgatgccttctgcaggtacggc
cgtctgcgcggctggaacgtcctgtttatatgtggcacagacgagtacggcacagctaca
gagaacaaggccagagaggagggtctgacaccgcagcagatctgcgacaagtaccatgcc
attcacgccaacatctacaagtggttccagattgacttcgacttttttggcagaaccacc
accgagaagcagacggagatcgcccaggatatattctggagagtccacaagcatggtttc
ctcatggaagacacggtggagcaactgcgttgtgaaaactgcctgcgcttcctcgccgac
cgcttcgtagagggcatctgtcccaactgcaactacccagaagctcgtggtgaccagtgt
gacaagtgtgggcggctcatcaatgctgtggagctgagggaaccccagtgtaaagtctgc
aagcagactccggttgtacgctcctccaaacatctcttcttggacctgccaaagctggag
gctcagttggagaagtggctggacaagtcaaccagcacaggagactggacggcaaatgcc
aaacagatcactcgctcctggctgagagacggactcaaacctcgctgtatcaccagggac
ctgcggtgggggacgccagtacctcatcctgactttaaagagaaggtgttctacgtgtgg
tttgacgcccctattggttatctgtccattaccgccaactacaccgaccaatgggagaag
tggtggaagaatcctaatcaggtggagctgtacaacttcatggccaaagacaatgtgccg
ttccacagtgtggtattcccctgctccctactgggagcgcaggacaactacactctggtc
aaccacctcattgccactgagtatctgaattacgaggacacgaagttctccaagagccgc
ggagtgggcgtgtttggagacatggccaaggacacaggcatcccaccagatgtgtggcgg
ttctacctcctctatgtgcgtccagagggacaggattcagccttctcctgggctgacatg
gctctgaagaacaattccgagctgctcaacaacttgggcaacttcatcaacagagctggc
atgtttgtcactaagttctttgagggcagcgtgcctgtgatggagctacagcaggaggat
aagaggctcctggctctggtgggctgggagctgcagcaatacatccagctgttggacaaa
gtcaaaatccgcgatgctctgagacacatcctcaacatctctcgccatggcaaccagtac
attcaggtcaatgaaccctggaagaagattaagggaggagacactgagaggcagcgtgcg
ggaacggtcaccggtgttgctgtgaatgtcgcctgcttgctgtcagtgatgctgatgccg
tacatgccagctgtcagccaaaccatcagggatcaactcaatgcccctccgtcctgtgtc
aataccatgttgcaagggactggatcctttgtttgttgtctcagtgccggccaccgcatt
ggcacggtcagtccgttgttccagaaactggagacggaccagattgaggctttgaagaag
agatttggtggacagcagcctgaagatgaaccacctaaaaaaaagacggcggttcagagc
gctggcagcactcagcctgccgctgtgccagctcctgctgctgtcactgctgaggtggcg
tcggcgaacggagtggacccagaaagagccaagcagctcacacaggctgtgactgagcag
ggggaaaaggtgcgagcactcaaagcccaaaaagcggagaaggcagtgatcacagcggag
gtgaccaaactgttggacctaaagaaacagctggctgtggctgaggggaagagccccgag
cctgcacctcagaagggcaagaagaagtga
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