Anoplopoma fimbria (sablefish): 129106785
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Entry
129106785 CDS
T09102
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129106785
04082 Neuroactive ligand signaling
129106785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129106785
Ion channels [BR:
afb04040
]
Ligand-gated channels
GABA-A
129106785
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129106785
NCBI-ProteinID:
XP_054473981
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Position
18:complement(3300611..3320643)
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AA seq
471 aa
AA seq
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MPGYARFLFVLLCLVLLGECRRHKSRKKRWSAPTETHKPGSPLSKKVADGTKSKKVKTSH
LLRIDDHDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPS
TTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAA
CNMDFSRFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTS
RLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLG
ITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVRDGKDR
KLREKARQQTLPCTCGMSHARTMMLDGTYSEADANSLAGYTRGSMAAEDSSEKQERMVVH
LSLDTEPTGTKKKGIRGFRIIQNTHAIDTYSRMIFPGAYILFNLVYWCVYC
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgccgggctacgcgaggttcctgttcgtgcttctgtgtctggttctgctcggggagtgc
aggagacacaaaagtcggaaaaagcgctggtctgcgccgacagagacgcacaagccgggc
agccctctgtccaagaaggtcgcagatggaaccaaatccaaaaaggtgaagaccagccac
cttctgcgcattgacgaccacgacttcaccatgaggccggccttcgcaggtccagctgtc
cccgttggagtggatgttcaggtggagagcttggacagcatatcggaggtagacatggac
ttcaccatgaccctgtatctgcggcactactggaaggacgagaggctggccttcccgagc
accaccaacaagagcatgacctttgacggccgcctggtgaagaagatctgggtgcccgac
gtgttcttcgtccactccaagaggtccttcatccacgacaccaccactgacaacatcatg
ctgcgggtgttccccgacggccacgtcctgtacagcctgagggttacagtcactgctgcg
tgcaacatggacttcagtcgtttccctctggactcgcagacgtgcacgctggagctggag
agctatgcgtacacagacgaagacctgatgctgtactggaaaagcggcgatgagtctctg
agcaccgatgaccggatctctctgtctcagttcctcatccagaagttccacaccacctcc
agactggcgttctacagcagcacaggctggtacaaccgtctgtacatcaacttcactctg
cggcgtcacatcttcttcttcctgctgcagacctacttccccgccaccctgatggtcatg
ctgtcctgggtgtccttctggatcgaccgcagggccgtccccgccagggtctcattaggt
ataaccacggtgctcaccatgtccaccatcatcaccggagtcaacgcctccatgcctcgg
gtctcctacatcaaagccgtggacatttacctctgggtcagtttcgtcttcgtcttcctg
tccgtgctggagtacgctgccgtcaactacctgacgacggtgagggacggcaaggaccgc
aagctcagagaaaaagcccggcaacagacactcccatgcacctgcggcatgtcccacgcc
aggaccatgatgctggacggcacctacagcgaggcggacgccaacagcctggccgggtac
acgcggggctccatggcggctgaggattcatcagaaaagcaggagcggatggtggttcat
ctctctctggacaccgagcccacggggaccaagaagaagggcatccgcggcttccggatc
atccagaacacccacgccatcgacacctactcccgcatgatcttccccggcgcctacatc
ctgttcaacctggtctactggtgtgtgtactgctga
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