Anoplopoma fimbria (sablefish): 129111789
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Entry
129111789 CDS
T09102
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129111789 (gtf3c3)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
129111789 (gtf3c3)
TFIIIC, fungi type
129111789 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_16
TPR_19
TPR_14
TPR_CcmH_CycH
TPR_12
TPR_11
TPR_6
ANAPC3
TPR_7
TPR_9
TPR_Slam
HAT_PRP39_C
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
129111789
NCBI-ProteinID:
XP_054479863
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All DBs
Position
22:12100372..12116302
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AA seq
946 aa
AA seq
DB search
MSGFSAELIDYLEGRITFEEFDQRRDERKAKESEVSAEGVEEDAQPSTSAQIPGNIEEGV
SPGVQQAFASMLGEKPEPPSSDEQEEGEEDSFSFVDDEDDEDFKLEEEEKVRMEMEEAAK
RRKRRAKRRRGRKGRKQRELEEEEEDADEDPTVGDVFALEMELNRENKKMMRERRHRSKL
PRALRGLMGEANIRFARGEKEDAILMCMEIIRQAPLAYEPFSTLAMIYEDDEDMDKALQF
GLIAAHLNPSDCEEWIRLAEMSLEQDNIRQAIVCYSKAIKYDPTNVRYVWERSSLHMRLG
EHKQCMDGYRRILSLLPMEDGEHFMQLSKDMAKSYYESNDLPSALGVIEDALERHPSLVS
DDFINMAAELLIANRQYNKALQVLVQFAGIVLVRDESKSGCEEPRQEERVAEEMTEEQDE
KDEEDTQSKTEEEKAVKENCEIKDVHVSDSVPVDLKAKLTVCLIHLHVNTPLEGLVSSLM
EQSPEEIGDLYLDVAEAYLEEGKYMIALPLLSALVISEKYNLAVVWLRHAECLKALGQME
AAAQSYTKVVDMAPQHLEARLSLATLQQQLGRPECALKALESMYDSETLAQDSSAAQKEL
KLLLHRSTLLKTQGQTQDYLDAMITMISMLLKVAMQRAKVCVRTVSMSGENHLRLVKAIL
PEIADHEAAYLDNTGKTNVLSKEDWWQLLVSCVLTLCEVKRYEEAELLVESAMEFYSFYD
NKPRRKEMECFGLSATILDQNYYKAYNYIRLMLMENVDRPQLWNIFNQLTITSQHQRHHR
FCLRLLLKYPDNHALCVLCGHNAMVSGSFKHALGQYVQAFQTHPKIPLHSLCVGLTFFHM
ASQKYVAKRHTLVLQGFSFLWRYVELRGVCQESMYNLGRALHQIGLTHLAIHYYQTALTL
PAQKLEGIPDDHLDLRREIAFNLSLIYQASGNMEMAHQLINTHCIV
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtttcagcgctgagctgatcgactacttggagggaaggatcacttttgaggag
tttgaccagcggagggatgagcgcaaagccaaggagtcagaggtatcagccgaaggtgtg
gaggaggatgctcagccctctacatctgcacaaatcccggggaacatcgaagagggagtc
agcccgggggtccagcaggcctttgcctccatgctgggagaaaagccagaaccaccatct
tcagatgagcaggaggagggagaggaggacagctttagctttgttgatgatgaagatgat
gaggacttcaagctggaggaagaggagaaagtgaggatggaaatggaggaggcagcgaag
aggcggaagcggagagcgaaaagaagaagaggacggaagggtaggaaacagagagagttg
gaggaagaggaggaggatgcagatgaggatccgacagtgggggacgtgtttgcgctggaa
atggagctgaaccgagaaaacaagaaaatgatgagggagcggcgtcatcgcagcaaactg
ccgcgagctctgagaggcttgatgggagaagccaacatccgcttcgccagaggagagaaa
gaggacgccatcttgatgtgtatggagatcatcagacaagctcctttggcctatgagcct
ttttccacattggccatgatctacgaggatgatgaagacatggacaaggcgctgcagttt
ggtctgatcgccgcccacctgaacccttcagactgtgaggagtggatcagactggcagaa
atgtctctggagcaggacaacatccgacaggccattgtctgctactctaaagccattaag
tatgaccccactaacgtgcgctacgtgtgggaacgctccagcctccacatgcgtctgggc
gagcacaaacagtgcatggacggctaccgcaggatcctatcactgctgccgatggaggac
ggagagcacttcatgcagctctctaaggacatggccaagagttactatgagagtaatgac
ttgccctcagctctgggtgtaatagaggacgctctggagcgacaccccagcctggtcagc
gatgacttcatcaacatggcagctgagctcctcatcgccaaccgccagtacaacaaagcc
ctgcaggtcttggtccagtttgcaggtatagttttggtaagggatgaatccaaatcaggg
tgtgaggaaccaagacaagaagagagagtggcagaggaaatgactgaagaacaagacgag
aaggatgaggaagacacacaatcgaagactgaagaggaaaaagctgttaaagaaaactgt
gaaattaaggatgtgcatgtatcagacagtgtcccagtggacctaaaggccaagctaact
gtctgcctcatacacctgcatgtcaacacaccccttgagggactagtgtcatcactgatg
gagcagagtccagaggagattggtgacttgtacctggatgtagctgaagcctacttggag
gagggcaagtatatgattgccctgccgctgctatctgccctcgtcatatccgagaagtac
aatctggcagtcgtctggctccgacacgcagagtgtctgaaggcgctgggccaaatggag
gcggcagcacagagctacactaaggtggttgacatggctccgcagcacctggaggctcgg
ctgtccctggcaaccctgcagcagcagctgggccggcccgagtgcgctctcaaggccctg
gagtcaatgtacgacagcgaaacgctggcacaggactcgtcagctgcacaaaaggaacta
aagctgctgctgcatcgttccacactgctgaagactcagggacaaacacaggactacctg
gatgctatgatcaccatgatctccatgctactcaaggtagctatgcagcgagctaaggtg
tgtgtgcgtactgtatccatgtcaggcgaaaatcacctgagactggtgaaggccatcttg
ccagagatcgctgaccacgaagctgcctatctggacaacactggtaaaaccaatgttctg
tccaaagaagactggtggcagctgctggtgagctgcgtgctcacactgtgtgaggtgaag
cgttacgaggaggctgaactgctggtggagtccgccatggagttctactccttctacgac
aacaagcccaggaggaaggagatggagtgcttcggcctgtccgccaccatccttgaccaa
aattattacaaggcctacaactacatcagattgatgctgatggaaaatgtggatcggcct
cagctttggaatatttttaaccagcttaccataacctcccaacaccagcgacaccatcgc
ttctgtctacgtcttctgttgaaatatcccgataaccacgccttgtgtgtcctgtgcgga
cacaacgccatggtgtcggggagcttcaaacacgctctgggccagtatgttcaggccttc
cagactcaccccaaaatcccactccacagcctttgtgtgggtctcacctttttccacatg
gcatctcaaaagtatgtcgccaaacgacatacgctggtgctgcagggtttctcctttctg
tggcggtacgtggagctgcgtggagtgtgtcaggagagcatgtacaacttgggcagagcg
ctgcaccagataggcctcacacatttggccatacattactaccagacggcacttacactt
cctgctcagaaactggaggggatccctgatgaccatctggatctgaggagggagatcgcc
ttcaacctctctctcatctaccaggccagtgggaacatggagatggcccaccagctcatc
aacacgcactgcattgtttga
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