Anoplopoma fimbria (sablefish): 129112627
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Entry
129112627 CDS
T09102
Symbol
atxn7l1
Name
(RefSeq) ataxin-7-like protein 1 isoform X1
KO
K11318
ataxin-7
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129112627 (atxn7l1)
03036 Chromosome and associated proteins [BR:
afb03036
]
129112627 (atxn7l1)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
129112627 (atxn7l1)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
129112627 (atxn7l1)
SAGA complex
129112627 (atxn7l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCA7
DUF2024
DUF2462
Motif
Other DBs
NCBI-GeneID:
129112627
NCBI-ProteinID:
XP_054480776
LinkDB
All DBs
Position
23:complement(11025202..11049014)
Genome browser
AA seq
707 aa
AA seq
DB search
MHSKNQKRHGSPAPSRSLLVPMKPKAPAVAPAVAPSPRDTLAFRIPKDYPHSRFSKAPLA
VYPPKGARNKTCVSLPVVSLEKMPCLSHADSASHVRLTTTSASPSSLKPSSLTPPASQRS
GEKLTNGRGTSGPSTPRSTTSPSSLDRRPSPSRSPLDRRLLSTPSPSTLDRKPSPSPSPS
HRSGALPPSLSSSPLEKKQQNGTKTSSRTQRRLSGRVFDPNKHCGVQDPETKRPCTRSLT
CKTHSLTHRRAVSGRRMHFDVLLAEHKGRAKVNEGAKEKEKEKEKGDGSQGGKEGISSQS
ITPQQTSCPNKPHCPNGRPLSTLKLRLANAHIPRVPGSTTCTSGPLPPAPAPNPEPSPHS
LGASAGDGGRLSSDEGDAETPEDTDRPAIHYSNSHPQPFGFCVFRSRLMGRGHYVFDRRW
DRMRLALQNMVEKHLNAQMWRKVPLAAESLLSLSSSGTSPVASQQAPSPSSVTSPLLSSP
SNSLSYPAAFPKSASMPGTFSIRDAPQPVAPVSALGKARNGTLKASRPSKDTEDSAVASQ
RRKNSSHPSSSSFSPSSLFPTVDTVRRNGSVCHPTLQGSPATAANPARKKGGASGLWSGG
EDWLSRADRSQSHNSQNSRELGMTGIPYSPSREPASAPHQPLASPSGPLAYGGGAEGRKR
RSPSSYRGKASKLSRPGGLESLFGNGSDTVGILASGPESPRQTKLHH
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcatagcaaaaaccagaagcgacacggctcccctgctccctccaggagcctcctggtc
cccatgaagccaaaagcacctgcagtggcccccgctgtggctcccagtcctcgggacacg
ctggctttcaggatccccaaagattaccctcactcacgcttcagtaaggcaccacttgcg
gtctacccaccaaagggggcccggaacaagacgtgtgtgtcccttcctgtcgtgagcctg
gagaagatgccctgcctcagccacgccgactctgcatcacatgtgcgcctcaccaccacc
tccgcctctccctcctccctcaaaccttcgtctctcactcccccggcctcccaacggtcc
ggcgagaagctcacgaacggtcgtggcaccagcgggccgtccacaccgcgctccaccacc
tctccatcctctctggacaggcggcccagtccgtctcgctctccgctcgacaggcggctg
ttgtcgacaccttctccttccacgctggaccggaaaccctccccgtctccttccccttcg
caccgatctggagctctgccgccgtcgttgtcgtcgtcgccattggagaagaagcaacaa
aacgggactaagacttcctccaggacgcagagaagactctcagggagagtctttgatcct
aacaagcactgtggagtccaggaccctgaaactaagcgaccctgcacgaggtctctcacc
tgcaagactcactccttaacccaccgccgagccgtctccggccgaaggatgcatttcgac
gtcctcctggccgaacacaaggggcgggcgaaggtcaacgagggagcgaaggagaaggag
aaggagaaggagaaaggggacggatcgcagggagggaaggaaggcatcagcagccagagc
atcacgccacaacagacctcatgtcccaacaagcctcactgtccaaatggacgacctctg
tccacgctgaagctaaggctggcgaatgcacacatacccagggttccaggctccaccacc
tgcacctccggtcctctgcccccagcacctgcccccaacccagagccctccccccacagt
ttgggggcatcagcaggagacggcggtcgactttccagcgacgagggagacgcagagact
ccagaggacaccgacagacctgccattcactactctaacagccacccacagccttttggg
ttttgcgtattcagaagcaggctgatgggacggggtcactacgtgttcgacaggcgatgg
gaccggatgaggctggcgctccagaacatggtggagaaacaccttaacgcacagatgtgg
aggaaggtgcctctggccgctgagagcctcctctccctctcctcctctggtacctccccc
gtcgcttcacaacaggccccctctccctcctccgtcacttctcctctcctctcgtccccc
tccaactccctctcctaccccgctgcgttccctaagtccgcatccatgccggggacgttc
agcattcgagacgctccgcagcccgtcgccccggtctccgcgctgggtaaagcccgtaac
ggcacgcttaaagccagccgcccatccaaagacacggaggactctgcggtggcatctcag
aggagaaaaaactcttcccacccttcctcctcgtccttctctccttcttccttgtttccg
accgtggatactgttaggaggaacggcagcgtttgtcatccaacgttacaaggttcgccg
gccacagcagcaaacccagcgaggaaaaagggcggagctagtgggctctggagcggcgga
gaggactggttgtccagagctgacaggtctcagagtcacaactcgcagaacagtcgcgaa
cttggcatgaccggcataccctactcaccaagcagggagcccgcctcggccccccatcag
cccctggcctccccctccggacccttggcttacgggggaggagcagaggggaggaagagg
aggagtcccagctcctacagagggaaggccagcaagctgagcaggccgggcgggttggag
agcctctttgggaacgggagcgacaccgtgggaatactggcttcggggcccgagtcccca
agacagaccaagttgcatcattga
DBGET
integrated database retrieval system
