Anoplopoma fimbria (sablefish): 129113280
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Entry
129113280 CDS
T09102
Symbol
siah2l
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Siah2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129113280 (siah2l)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129113280 (siah2l)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
129113280 (siah2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
129113280
NCBI-ProteinID:
XP_054481470
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All DBs
Position
24:complement(677185..689141)
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AA seq
350 aa
AA seq
DB search
MLCLRGPGATSGSKQEMTFPPARQFTGIGPQLEAMSRPSSAGAAGAGGGLGAGKAGGGSX
QQAAGLVSLSSGGPGSSGSSGSASSASSSGPAAVGSGQSPELTALFECPVCFDYVLPPIL
QCQAGHLVCNLCRQKLSCCPTCRGPLTPSIRNLAMEKVASTLPFPCKYSSAGCPLALHHT
EKPDHEEVCEFRPYTCPCPGATCKWAGSLEAVMPHLMHAHKSITTLQGEDIVFLATDINL
PGAVDWVMMQSCFSHHFMLVLEKQEKYEGHQQFFAVVLLIGTRKQAENFAYRLELNGNRR
RLTWEATPRSIHDGVAAAIMNSDCLVFDTSIAHLFADNGNLGINVTISMC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgcctccgggggccaggagcgacgtccggtagtaaacaggagatgacgtttccg
cccgctcggcagttcacgggaatcggaccgcagctggaagccatgagccgtccgtcctcc
gcgggggctgcgggtgcaggtggaggcctcggggccgggaaggccggcgggggaagcnct
cagcaggccgcgggcctcgtgtctctgtcctccggtggccccgggtcctccggctcctcc
gggtccgcctcctccgcctcctcctccggccccgccgccgtgggctccgggcagtctccg
gagctcacggcgctgttcgagtgcccggtgtgcttcgactacgtgctgccgcccatcctg
cagtgccaggccggccacctggtgtgtaacctgtgccgccagaagctgagctgctgcccg
acctgccgcggcccgctcaccccgagcatccgcaacctggccatggagaaggtggcgtcc
acgctgcccttcccctgcaagtactcgtcggccggctgtcctctggcgctccaccacacg
gagaagccggatcacgaggaggtgtgtgagttccgtccgtacacctgtccgtgtcccggg
gccacctgtaagtgggcggggtctctggaggccgtcatgcctcacctgatgcacgcacac
aagtccatcaccacgctgcagggcgaggacatcgtgttcctggcgacggacatcaacctg
ccgggcgccgtggactgggtgatgatgcagtcgtgtttcagccaccacttcatgctggtc
ctggagaagcaggagaagtacgagggccaccagcagttcttcgccgtggttctgctcatc
gggacacgcaagcaggccgagaacttcgcctaccgcctggagctcaacgggaaccggcgc
cggctcacctgggaggccacgccgcgctccatccacgacggcgtggcggccgccatcatg
aacagcgactgcctggtgttcgacacctccatcgcccacctgttcgccgacaacggcaac
ctggggatcaacgtcaccatctccatgtgctga
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