Amphiura filiformis: 140148215
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Entry
140148215 CDS
T10871
Name
(RefSeq) transient receptor potential cation channel subfamily V member 6-like
KO
K04975
transient receptor potential cation channel subfamily V member 6
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140148215
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140148215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank_3
Ank
Ank_5
Ion_trans
PKD_channel
TadB_TadC_N
Motif
Other DBs
NCBI-GeneID:
140148215
NCBI-ProteinID:
XP_072026182
LinkDB
All DBs
Position
3:complement(22066500..22088034)
Genome browser
AA seq
1051 aa
AA seq
DB search
MGGICTRRVRQQICGKWEDDSDDEWKRQNEAANQIPMYRLVYLSGIGLLVMKYHNRASDT
DFEDSLRRGVQHFLYDEGRGKVIEEWDYIQYRKNMTQDASKKEMYDDMSKQELIAEFHDY
QKDSINQFIPHKAGWDIDQRGAVGETILHLCYLNNTDAHRHIAKHLLKLYPSLVYDIYEG
ADYYGESVLHIAIINNDTESVKMLVGQYGAELDRRATGRFFRPHDLKERKAITLSKSNYA
GDAYYGEYPLAFAASTGNTEIYDYLIDESLGGTRPGQGKADPNAMDSFGNTVIHMTIIHN
QKLMFNHAIKHHKKPASYEIRNGAGLTPLQLSYKLGRYELFSSLLDLTSQTQWTYGSLAF
VAYPLSMLDSIGPNGEPNRSSALRTIIKNDSMQHLKMLEGQVIRDLLQKKWKHYARAHFY
FKFFWALLHLSVMSVAVYLRPGPEDDLLDTTGSTNRGRIVAEVSMVIGCIAKTITELFEV
ISRGSLRSYMGSLREFPFKALFIIGTMLVFLCIPCRFLGMRNVEDLLFIMSLPLSWSYIF
FFYRGMRSLGPLIVMIGKMLAGDLMRFSIIYIIFVFTFAQVFSYLYKDTIQNEVDDFATW
NGSFMTVFLLTVGEFDAVTFKYSRLPFVGHVVYVIFLLLVPVMMLSMLIAMMGKTYGIIE
ERSYMEWNRQWAMLVLNMERSISSSSLAKYQQKYSSKIKIPWSVAVKKGLVAANLGQTVA
DETGRDPFKNLRGLQSPMKSERKDSATVPLVTVDSSSSMSDMKLGKDDQQKPPKKTEEEE
DKEEEEKFYFTRALLVTKKLAKSQARTKREVKQRWKWCCRVVNRRKDMLERQKKRLSVFE
MYQKEKTILMSTRDGPRDGTLPHANRLNTVQERIEPSILQYVHPGQKKSSYESGSSGRRS
SSKTDKKRRQSGRKSKRDDKGTSTPTQVQLDRFENSSVPRLWSTTGVMNSTLSADKRSHN
VLVHSPVMPRFRSVIQSENSLGPSPFGGSKTLPASTAPGSFVEGLPPLRGSPRYADIRGT
ADRKDKKKKSKKKPSKSQGVSRSSDDAEDQC
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtatctgcacacgacgagtccgtcaacagatatgcggcaaatgggaagatgat
tctgacgatgaatggaagcggcaaaatgaagcagccaatcagattcctatgtaccgattg
gtttacctaagtggcataggattactggtaatgaaatatcacaatcgagcaagtgataca
gactttgaggactcactgagaagaggcgtgcagcatttcttgtatgatgaaggtagaggc
aaagtgattgaagaatgggactatatacagtatcgtaagaatatgactcaagatgctagc
aaaaaggaaatgtatgatgatatgtcgaaacaagagctcatcgccgaattccacgattac
cagaaagattccatcaaccaattcatccctcacaaagcaggctgggatattgaccagcga
ggagctgtaggggagaccattcttcatttgtgttatctcaataatacggatgctcatcga
catattgctaaacatcttctcaaactctacccatcattagtctatgatatctatgagggt
gcagactattatggtgaaagtgttctacatattgctatcataaacaatgacacagaatca
gtcaagatgctggttggccaatatggagcagaacttgacaggagagcaacgggacgattc
tttagacctcacgatctgaaagaaagaaaagcaataacactaagtaaatctaattatgca
ggcgatgcctactatggggagtatcccttggcattcgctgcttctactggaaacactgaa
atatacgactatttgattgatgaaagtttagggggtacaagaccaggacagggaaaggct
gatcctaacgctatggattcctttgggaatacagttatacatatgactatcattcataat
caaaagttgatgtttaaccatgcaatcaagcatcacaagaaaccagccagctatgagatc
cgcaatggagccgggttgacccctctgcagctatcctacaaactgggccgatatgaactc
ttttctagcctgctggacttgactagtcagacacaatggacctatggtagtcttgctttt
gtagcatatccactatctatgctggattccataggcccaaatggagaaccaaaccgtagc
tcagcattgaggaccattataaagaatgacagtatgcagcatttgaaaatgttagagggc
caagtcatcagagatctattgcagaagaaatggaaacactatgccagggctcacttctat
tttaagttcttctgggcattacttcatttgtctgtcatgtctgtggctgtgtacttgaga
ccaggaccagaagatgatctactcgacacaacagggtcaacaaataggggccgaatagtt
gcagaagttagtatggttataggatgcattgctaaaacaatcactgaattgtttgaagta
atctcaagaggatcgcttaggagttacatggggagcttgcgtgagtttccattcaaagct
ctgtttataattggcaccatgttggtattcctgtgtattccgtgtcggtttctgggcatg
aggaatgtagaagatctgcttttcatcatgagtctgcctctatcatggtcatatattttc
ttcttttacaggggcatgaggagtcttgggccattgattgtaatgataggcaagatgtta
gcaggggacttaatgagatttagcatcatctatatcatctttgtcttcacatttgcacaa
gtgtttagctatttgtacaaggatacaatccagaatgaagtggatgactttgccacatgg
aatggttcctttatgacagtgtttctactgaccgttggcgaatttgatgctgttacattc
aagtactctcgtctaccattcgttggtcatgtagtctatgtgatattcctattactggta
cctgttatgatgctcagtatgctgatagcaatgatggggaaaacgtatggtataattgag
gagaggtcatacatggaatggaatagacagtgggctatgcttgtgttgaacatggaaaga
tctatcagcagtagttcactagctaaataccagcaaaaatattcatcgaaaatcaagata
ccttggtcggttgcagtcaagaaaggcttagtagcagctaatttgggacaaacggttgca
gatgaaacaggccgagatccatttaaaaatctaagagggcttcagtctcctatgaaaagt
gaacgtaaagactccgctacagtgccactagttacagtagatagtagtagctcaatgagt
gacatgaaacttggtaaagatgatcaacagaaacctcctaaaaagacagaggaagaggag
gataaggaggaagaggaaaagttttatttcacccgtgcattgcttgtaactaaaaagctg
gccaagagtcaagcaagaaccaagagagaggtcaaacaaagatggaagtggtgttgccga
gtggtgaacaggagaaaggatatgctggaacgacaaaagaagaggctttctgtatttgaa
atgtatcagaaggaaaagacaatcctgatgtcaactcgtgatggccctagagatggtaca
ctgccccatgctaatagattaaacactgtacaagagaggattgaacccagtatcctccaa
tatgtacatccaggacaaaagaaatcatcttatgaaagtggatccagtggacgccgttca
tcgtcaaagacagacaaaaagcgccgtcaatcaggcagaaagtctaagcgagatgacaaa
ggtacatcaacacctacacaggtgcagttagatcgttttgaaaacagttcagtgccacgg
ttgtggtcaactacaggggtgatgaattcaactctctcagcagataaacgatcacacaat
gtgcttgttcattcaccagttatgccaagatttaggagtgtgattcagtctgagaactca
ctgggaccatctccttttggaggctcaaagacattgccagcaagcacagcacctgggtca
tttgttgaaggcctgcctccgttgagaggaagccctaggtatgcagatatcaggggtacc
gcagatagaaaagataaaaagaaaaaatcaaaaaagaaaccatcaaaaagtcaaggtgtt
tctagaagttctgatgatgcagaagatcaatgttaa
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