Amphiura filiformis: 140148426
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Entry
140148426 CDS
T10871
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
afil Amphiura filiformis
Pathway
afil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
140148426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afil03400
]
140148426
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
140148426
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
zf-B_box
MTLN
Motif
Other DBs
NCBI-GeneID:
140148426
NCBI-ProteinID:
XP_072026463
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Position
3:35299945..35390020
Genome browser
AA seq
1150 aa
AA seq
DB search
MPRRSTRTNNVSEKDTTISGVRRNDKSKTVKSSNTGKETKAKTSNKRKMPVRSHQDGKHH
AEKSSVKVAEGDLSDESDFDMQSSPPLKTPKATKTKQTVRSKNAKKPVVKQESGIRTKRK
KDVKDDESDHQAKKQNMSSVKIEQTIASKSTDETNQMESSNKRKRKGTKASEAVKSIPPK
KNSRQAKTQANEFTDTNDIPIKKQKGKRANKSPALGKESTEYTKVNAGVKKEGKREVLST
EGNMEVGRRVKEEEDEITGQVVEMSSDSSESEWEEVEDLPLDVIDPEGAGPSGDTKPKEP
VEISIDVSGGNTRHGKRKQKYEEMWRRYLQWQVNKSNKELQENLHKVHLLCLLASGLRSS
SLCNDVELLCIALSQIPDSIMPRSTKKVDNYYLPRFFKWFKSSFEIDAELKDDSCHPVKD
KLIQRLETRKMASENELVHVCILLLRALGLDVRLIASLHPITIKATKLTKANKKLSKAKA
NKSTPRSSKPTEKKAPHSKTKPVTSKFFQSSHDKPGSSSSTNKTKDSSATNSKTVNKNKR
TTAKSKKTKDENPQENTKTGENTQSSVPSGPRPKNRQPRQCASKVKPIIELSGSEVESSS
DDYEAMESGNDSDYEESESKKSVRRKKQNSAVRKKRTTTLSGSDSDYEDQSAVVQKKHPA
NGRRQHSVTHSKSTKEADSDCEELGSTSKQKKKGKVASKKTEKSKQNSGGDSSVEELNSD
SDFEVEVLKVASGPRSSASSSGEGSGKKKSRKMVSSDSGESVEIIKTKGNFKQGTDTWLE
VYCASDKAWICVDCVHGHVKRPELCESYASKPISYVVAFDNEGSIKDITHRYDSKWMIGT
QKLRVDSEWWQETLRPFRTRNTRRDREEDDQLQGKLMNKPLPTTISEYKGHPLYALKRHL
LKFEGLYPETAAILGYCRGEAVYARECVHELHTRQTWLKEAKSVRIGEKPYKMVKARPKR
NQPMETEPSLEVFGEWQTEDYEPPIAVDGIVPRNEHGNVELFKECMLPKGTVHMRLVGLN
RIARKLEIDCAPAMTGWDFHSGFCHPVLDGYVVCEEYEDLLEDAWHKEQQEIEKKNRKKK
EERALKNWKLLIKGVLIRERLNKRFRSDDGAGTSSPSKSKAKKSEKVSWPKNRMTAFEGD
ESNRLPFEKL
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggagaagcacaagaactaataatgtatctgagaaggacacaactatctctgga
gtgagacggaatgataaatcaaagactgtgaaatccagtaatactggtaaagaaacaaaa
gctaaaactagcaacaaaaggaagatgccagtgagaagtcatcaagacggcaaacatcat
gcagaaaagtcatctgtcaaagttgcagaaggagatttgagtgatgaaagtgattttgac
atgcaatcatcccctccattgaaaactccaaaagcaactaaaacaaaacaaacggtaaga
agtaaaaatgcaaagaagccggttgtgaaacaagaatccggtattagaacaaagagaaag
aaagatgtaaaggatgatgaaagtgatcatcaagctaagaaacagaatatgtcatctgta
aagatagaacagactatagcaagtaagtctactgatgaaaccaatcagatggagagcagt
aataagagaaaaagaaaaggaactaaagccagtgaagctgttaaaagtattccacccaag
aaaaattcaagacaagcaaaaactcaagctaatgaattcactgatacaaatgatattcct
atcaagaagcaaaaaggaaagagagcgaataaatctcctgcacttggcaaagagagtacg
gaatatacaaaagtgaatgctggtgtaaagaaggaaggaaagcgtgaagtactttctact
gaaggtaatatggaggttggcaggagagttaaagaggaggaggatgaaattactggacag
gtggtagagatgtcatcagatagcagtgaatcagaatgggaggaagtagaagacctgcca
ttagatgttatagacccagagggtgcaggacccagtggagacactaaacccaaggagcca
gtagagatcagcatagatgtatcaggagggaacacccgacatggcaagagaaaacagaag
tatgaggagatgtggagaaggtatttgcaatggcaagttaacaaatctaacaaagaattg
caggaaaatcttcacaaggtgcacctattgtgtcttttagcaagcggtcttcgaagtagc
agcttatgcaacgatgtggaactactgtgtattgcactatctcaaatccctgactccatc
atgccaagaagtaccaagaaagttgacaactactacctgccaaggtttttcaaatggttt
aaatcatcgtttgaaatagatgctgagctaaaggatgacagctgtcacccggtgaaagac
aagttaattcagagattggagacaagaaaaatggcatcagaaaatgagcttgtacatgtg
tgtattttgctactaagggcacttggtttggatgtcaggttgattgcttcactacaccca
attaccatcaaggctactaaactcactaaggcaaataaaaaattgtccaaagccaaggcc
aacaagtcaacaccacgttcatcaaaacctaccgagaagaaagctcctcattccaagact
aagcctgttacttccaagttcttccagtcctctcatgacaaaccaggcagtagctcatcg
acaaataagacaaaagactctagtgcaacaaacagtaaaacagtcaataaaaacaaacgt
acgacagctaagagcaaaaagaccaaagatgaaaatcctcaggaaaatactaaaactggt
gaaaatacccaaagttctgtgccaagtggtcctagacctaagaacaggcaaccacgacaa
tgtgcttccaaggttaaaccaatcattgaacttagtggtagtgaggttgaatcatcttct
gatgactatgaagcaatggaatcgggtaatgatagtgattacgaggaatcagaatcaaag
aagtcggtaaggagaaagaagcagaattctgcagtacgtaagaaaagaactaccacgtta
tcaggaagtgatagtgattatgaagatcagtctgctgtagttcaaaagaaacatccagct
aatggaagaagacaacattctgttacacatagcaaaagtactaaagaagctgacagtgac
tgtgaagaattaggtagcactagtaagcagaaaaagaaaggcaaagttgcaagtaagaag
actgaaaagtcaaaacaaaattcaggtggagattcaagtgttgaggaactgaattctgat
agtgattttgaagtggaagttctgaaggtggcttctggaccaagaagtagtgccagtagt
agtggagaaggaagtggcaagaaaaaatcaagaaagatggtgtcatctgactcaggggag
agtgtggaaattatcaagactaaaggcaactttaaacaaggtacagatacttggttggag
gtatactgtgcatcagataaggcctggatatgtgtggactgtgttcatgggcatgtcaag
agacccgaattgtgtgaatcgtatgcttccaaaccaatctcatatgtggttgcatttgac
aatgagggcagtataaaagacataacccatcgctatgactccaaatggatgataggaaca
cagaaactgcgagtagactcagaatggtggcaggaaacattgcggccatttaggactaga
aacactagaagagatcgagaggaagatgaccaactacaaggaaaattgatgaacaaacct
cttcctaccaccatctctgaatacaagggtcatccattgtatgccctgaaaagacacctt
ctcaagtttgaaggcctttacccagagacggcagctattttaggctactgtagaggtgaa
gcagtgtatgctagggagtgtgtgcatgaattacatacgaggcagacatggttaaaagaa
gcaaagagtgtgaggataggagaaaaaccgtacaagatggtaaaagctagaccaaaaagg
aatcaaccaatggagacagagccctcattggaagtgtttggtgagtggcagactgaggat
tacgaaccaccaatagcagttgatggtatagtacctcgcaatgagcatggaaatgtagag
ctattcaaggagtgtatgcttcccaagggaactgtgcatatgagattggtaggactaaac
cgtattgcacgtaagcttgaaattgactgtgctccagcgatgactggatgggattttcat
tcagggttttgtcatccagtgttggatgggtatgttgtttgtgaggagtatgaagatctg
ctggaagatgcatggcataaagaacaacaggaaattgagaagaaaaataggaagaaaaag
gaagagagagcgctcaagaactggaagctacttatcaaaggggtacttattagagaaaga
ctcaacaagaggtttcggtcagatgacggagccggcacaagttcaccatcaaaatccaaa
gccaagaaatcagaaaaggtttcttggcccaagaatagaatgactgcatttgaaggagat
gaaagcaacaggttgccttttgaaaagttatga
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