Amphiura filiformis: 140152029
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Entry
140152029 CDS
T10871
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140152029
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140152029
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GFIT
Motif
Pfam:
Ank_2
Ion_trans
Ank
Ank_3
Ank_4
Ank_KRIT1
TRP_2
Motif
Other DBs
NCBI-GeneID:
140152029
NCBI-ProteinID:
XP_072030430
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All DBs
Position
5:complement(16894258..16911499)
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AA seq
794 aa
AA seq
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MDTTDIAGFLKAVERNDVDKVASLLQLSQQRDISLDINAVYMVKGDHQTPLIAAIASKNI
EMTSLLLEHGAKSDDILFYCIDAGCDTMVKLICEHLKSISQESLTTALNTISTDDNVKPV
SSPLMYASRENSHEIVKALIEYGAEMPDLQTVLDHSKGDTYEQYLTCYSWHQAISSEAYL
LYASKDPIQAAIDAGKAVLKRKSAQQHHLRSAYEELIVQLDLFVTKCFAMASSEHEIGVL
LWNRKDNVNDDNVAQVGILPQRIHDTLSLQYKQFISSTACTHFVLDQWYMRWKELSVLHF
TLWTAMIIIFQPVLCLAYMFLPFKWHRQIMKTPYVRFLVHLVSRISFIGFIVYITIVTSS
DAKFTENEHQRVNQILEYFTKPPLTIKIIAYAWRRVLLKDICSLLALVALFADVSSSSND
SNNFINDISTEYTICDQFLAEVLNKRDTVNSSFPVLLDIPHTPGPALDSIQNPTEDADDP
LLHFNPEDPALLGDALFGVATVLSFLALLRDFVVVAFVGPLRVSFGRMISDIVRFLILFI
FVWISFALGMTQLYTTYDIIERANCFEHKDTCIPSPFTTLPDSLSALFWSLFNPIDEESM
RILPEFKITFAVGEALYAIYMVVVVVVMLNALIAMMSNTYTRVEENSEVEWKVARTNLMA
EYMTTGATLPPPFNLLPTLRMIRNWIYASCKRICRCCRSDYHKPMDKTTETVELQETNSY
QTLMETLVDRYVRTYVDHNDNTREVGSGDKWAQVKMSLNKMEDQMELILQFIQDNPAAQP
SRSSSSRAKKLFFK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggatactacggatatcgcagggtttcttaaggctgtagaaaggaatgatgttgacaaa
gtcgcttcactactacaattatcgcaacaacgcgatattagtttggatattaatgcagtt
tacatggttaagggcgatcatcaaacaccacttattgcagctattgcatccaagaacatc
gaaatgacatctttgttactggagcatggtgccaagtcagatgacatattgttttactgc
atagatgcagggtgtgacaccatggtgaaactaatatgtgaacatctcaaatcaatatca
caggaatctctgactacagcattaaataccatatccacggacgacaatgtcaaacctgtg
tcgagtccactgatgtatgcttccagggaaaactcgcacgaaattgttaaggccttgata
gaatacggtgctgaaatgccagatctacaaaccgttctagaccactccaaaggagatacc
tatgaacaatatctaacctgctacagctggcatcaagctatatcaagtgaagcatatctt
ctgtatgcatctaaggatcccattcaagcagctatcgatgcagggaaagctgttcttaag
aggaaatctgcacagcaacatcatcttcggtctgcctatgaggaattgatagtacaacta
gatctgtttgttaccaagtgttttgcgatggctagttcagagcatgagattggtgtatta
ctgtggaataggaaagataatgtcaacgatgacaatgttgctcaagttggtattctacca
caaaggatacatgacacgctcagtcttcagtataagcagtttatctccagcactgcgtgt
acacattttgttcttgatcaatggtacatgaggtggaaggagctgtctgttcttcatttt
actctctggactgcgatgattatcatctttcaaccggttctatgtctggcatacatgttc
ctccctttcaagtggcatcgacaaataatgaaaaccccatacgtacgttttctggtacat
ttggtatctcgcatctcctttattggattcatcgtgtacattacaatagtgacatcgagc
gatgccaagtttacagaaaatgaacaccaacgtgtgaaccagattctggagtattttaca
aaaccaccattgactattaaaataattgcctacgcctggagaagagttctcctaaaagat
atatgtagtctacttgctctagttgcgttatttgcggacgtttcatcttcaagcaatgac
tccaataattttatcaatgacatttctacagagtataccatctgcgatcaatttcttgcg
gaagttttgaataaaagagacactgtaaattcgtcctttccagtactcctggacataccg
cacacgcctggacctgcactagattctatacaaaatccgacagaggatgccgatgatcca
cttttacatttcaaccctgaagatcctgccttgctcggagatgctctctttggtgttgct
accgtgttgtcgttcttagctctcttgcgtgattttgtcgtagtggcatttgttggtccg
cttagagtatcatttggtagaatgatcagtgatatagttcgtttcctcatcctcttcatt
tttgtttggatttcatttgctcttggcatgacgcaactttacaccacttacgacataatc
gaaagggcaaattgttttgaacacaaggacacgtgtataccatcacctttcacaacattg
cccgattcacttagcgcgttattttggtctctgttcaatccaattgacgaagaatctatg
cgcattttgccagaatttaagataacgtttgcagtaggagaagcactctacgcgatatac
atggtagtagtcgttgtagtcatgttaaatgcacttatcgccatgatgagcaacacatac
acacgagtagaggaaaactcagaagtagagtggaaagttgctcgaacaaatttaatggcg
gaatacatgacaacaggtgctacacttccaccaccgttcaacctgttaccgacactgaga
atgattcgtaactggatatatgcttcttgtaaaaggatatgtcgatgttgccgcagtgac
tatcataaacctatggacaaaacaactgaaactgttgaacttcaggagacaaattcgtac
cagacattaatggaaaccttagtggatcgatatgtgaggacctatgttgatcacaatgac
aacacgagggaagttggcagcggagacaaatgggctcaagttaaaatgtctttgaataaa
atggaggaccagatggaactgattcttcaatttattcaggataatcccgccgctcaacca
tcccgatcaagtagtagtcgggctaagaagttattcttcaaataa
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