KEGG   Amphiura filiformis: 140158756
Entry
140158756         CDS       T10871                                 
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-C-like
  KO
K08770  ubiquitin C
Organism
afil  Amphiura filiformis
Pathway
afil04120  Ubiquitin mediated proteolysis
afil04137  Mitophagy - animal
afil04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:afil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    140158756
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    140158756
   04137 Mitophagy - animal
    140158756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afil04121]
    140158756
Ubiquitin system [BR:afil04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   140158756
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 OTU1_UBXL
Other DBs
NCBI-GeneID: 140158756
NCBI-ProteinID: XP_072038064
LinkDB
Position
8:complement(19136308..19146119)
AA seq 1445 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLX
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLALRPRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTTTLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENXKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGQ
NT seq 4338 nt   +upstreamnt  +downstreamnt
atgcagatctttgtcaagactctgactggcaaaaccatcacccttgaggttgaaccaagc
gacaccattgaaaatgtgaaagccaaaatccaagacaaggagggcattccacccgaccag
cagcgtttgatctttgctggcaagcaactggaagatggtcgcactctctcagactataac
atccagaaggaatcaactcttcatcttgtccttcgtctgcgtggtggtatgcagatcttt
gtcaagaccctgacaggaaaaaccatcactctggaagtggaaccaagtgacacaattgag
aatgtgaaagccaagatccaagacaaagaaggtattccaccagaccaacagcgtcttatc
tttgctggcaagcagctcgaagatggccgcactctctcagactacaacatccagaaggaa
tcaactcttcatcttgtccttcgtctgcgtggtggtatgcagatctttgtcaagaccctg
acaggaaagaccattactcttgaagtggaaccaagtgacactattgaaaatgtcaaagcc
aagatccaagacaaagaaggaattcctccagaccagcagcgtcttatcttcgctggcaag
cagttggaagatggccgtactctctcagattacaacatccagaaggaatccacacttcat
cttgtactccgtctgcgtggtggtatgcagatcttcgtcaagaccctgactggaaagacc
atcacccttgaggttgaaccaagtgacactattgaaaatgtaaaagccaagatccaagac
aaagaaggaattcctccagatcagcagcgtcttatcttcgctggcaagcagttggaagat
ggtcgcactctctcagattacaacatccagaaggaatccacacttcatctcgtactcnct
ctgcgtggtggtatgcagatcttcgtcaagaccctgacaggaaagaccattactctggaa
gttgaaccaagtgacactatcgagaatgtaaaagccaagatccaagataaggagggtatt
ccaccagatcaacagcgtctcatctttgctggcaagcagttggaagatggccgtactctc
tcagattacaacatccagaaggaatccacactccatctcgcactccgcccccgtggtggt
atgcagatcttcgtcaaaaccctcactggaaagaccatcacccttgaggttgaaccaagt
gacacaattgaaaatgtaaaagccaagatccaagacaaagaaggtattcctccagatcag
cagcgtctcatctttgctggcaagcagttggaagatggccgtactctttcagattacaac
atccagaaggaatccacacttcatcttgtactccgtttacgtggcggtatgcagatattt
gtgaagacccttacaggtaaaaccatcactttggaagtggaaccaagtgacaccattgag
aacgtcaaggctaaaatccaagacaaggagggtattcccccagaccaacagcgtctcatc
tttgctggcaaacagcttgaagatggtcgtactctctcagactacaacatccaaaaggaa
tcaactcttcatcttgtcctccgtctgcgtggtggtatgcagatcttcgtcaagactttg
acaggtaaaactattacacttgaagttgagccaagtgacaccatcgagaacgtcaaagcc
aaaatccaagataaagaaggtattcctccagaccagcagcgtcttatcttcgctggcaag
cagttggaagatggccgtactctttcagattacaacatccagaaggaatccacactccat
ctcgtactccgtctgcgtggtggtatgcagatctttgtcaaaaccctcacaggaaagacc
atcacccttgaggttgaaccaagtgacactattgagaatgtaaaagccaagatccaagac
aaagaaggtattcctccagatcagcagcgcctcatctttgctggcaagcagttggaagat
ggtcgcactctctcagattacaacatccagaaggaatccacacttcatctcgtactccgt
ctgcgtggtggtatgcagatctttgtcaaaaccctcacaggaaagaccatcacccttgag
gttgaaccaagtgacactattgaaaacgtaaaagccaagatccaagataaggagggtatt
ccaccagatcaacagcgtctcatctttgctggcaagcagttggaagatggccgtactctc
tcagattacaacatccagaaggaatccacacttcatcttgtactccgtctgcgtggtggt
atgcagatctttgtcaagaccctcaccggtaagaccatcacccttgaggttgaaccaagt
gacactattgaaaatgtaaaagccaagatccaagacaaagaaggaattcccccagaccaa
cagcgtctcatctttgctggcaagcaattggaagatggtcgcactctctcagattacaac
atccagaaggaatccacactccatctcgtactccgtctgcgtggtggtatgcagatcttc
gtcaagaccctcacaggaaagaccaccacccttgaggttgaaccaagtgacactattgaa
aatgtaaaagccaagatccaagacaaagaaggaattcccccagaccaacagcgtctcatc
ttcgctggcaagcagttggaagatggccgtactctttcagattacaacatccagaaggaa
tccacactccatctcgtactccgtctgcgtggtggtatgcagatctttgtcaaaaccctc
acaggaaagaccatcacccttgaggttgaaccaagtgacactattgagaatgtaaaagcc
aagatccaagacaaagaaggtattcctccagatcagcagcgtctcatctttgctggcaag
cagttggaagatggtcgcactctctcagattacaacatccagaaggaatccacactccat
ctcgtactccgtctgcgtggtggtatgcagatcttcgttaagaccctcacagggaaaacc
atcacccttgaggttgaaccaagtgacactattgaaaacngtaaagccaagatccaagat
aaggagggtattccaccagatcaacagcgtctcatctttgctggcaagcagttggaagat
ggccgtactctctcagattacaacatccagaaggaatccacacttcatcttgtactccgt
ctgcgtggtggtatgcagatctttgtcaagaccctcaccggtaagaccatcacccttgag
gttgaaccaagtgacactattgaaaatgtaaaagccaagatccaagacaaggaaggaatt
cccccagaccaacagcgtctcatctttgctggcaagcagttggaagatggtcgcactctt
tctgattacaacatccagaaggaatccacacttcatctcgtactccgtctgcgtggtggt
atgcagatcttcgtcaagaccctcacaggaaagaccatcacccttgaggttgaaccaagt
gacactattgaaaatgtaaaagccaagatccaagacaaagaaggaattcccccagaccaa
cagcgtctcatcttcgctggcaagcagttggaagatggtcgcactctctcagattacaac
atccagaaggaatcaactctgcatctcgtactccgtctgcgtggtggtatgcagatattc
gtcaagaccctcacaggaaagaccatcacccttgaggttgaaccaagtgacactattgaa
aatgtaaaagccaagatccaagacaaagaaggaattccaccagaccagcagcgtcttatc
tttgctgggaagcagttggaagatggccgcactctttctgattacaacatccagaaggaa
tccacacttcatcttgtactccgtctgcgtggtggtatgcagatcttcgtcaagaccctc
acaggaaagaccatcacccttgaggttgaaccaagtgacactattgaaaatgtaaaagcc
aagatccaagacaaagaaggaattcctccagaccaacagcgtctcatcttcgctggcaag
cagttggaagatggtcgcactctctcagattacaacatccagaaggaatcaactctgcat
ctcgtactccgtctgcgtggtggtatgcagatattcgtcaagaccctcacaggaaagacc
atcacccttgaggttgaaccaagtgacactattgaaaatgtaaaagccaagatccaagac
aaagaaggaattccaccagaccagcagcgtcttatctttgctgggaagcagcttgaagat
ggccgcactctttctgattacaacatccaaaaagagtctacactccatcttgtcttacgt
cttcgtggtggtcagtaa

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