Amphiura filiformis: 140158866
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Entry
140158866 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 6-like
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
afil Amphiura filiformis
Pathway
afil04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140158866
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
cNMP_binding
PDZ_6
RA
RA_2
Pyrid_ox_like
Motif
Other DBs
NCBI-GeneID:
140158866
NCBI-ProteinID:
XP_072038223
LinkDB
All DBs
Position
8:26081175..26211345
Genome browser
AA seq
1477 aa
AA seq
DB search
MYKPGFLITRTKVGMKPKMSTYIEPHFIKCIQKLSDQRSQEDLQSIYTYLHDLEALRSLR
EPALREIAKSVRYEKRDANDILYCRDDLSTCWYILLSGSVFIDHAMYLPRSSFGKRTSGS
GRRGHDCLLLESSELLVIDYPDAQFLHPGQRQSCSQNNLEKLMALEHDELKVPNNRGRSM
SEDRHIQQSYSDSEALPLPVIRLERTQSLDSEQKHPISKNEDVQALLGHMDKRSYLPITV
ASTASMSDRSSIHSSMSSSYSDLFPSGGENPDLDLSGLVESTVDSDDEESSETGSLLVRD
FVRDCLEKDPMDRTEDEIEILLDFMRNLPAFANMTMSVRRALCAVMVFAVVAKAGTVVMK
DGEELDSWSVILNGHVEVTRNENAIDQLHLGDSFGVKPTMESQYHHGVMRTTVDDCQFVC
IAQEHYFRILTQGEENIRRIEENGQLVMVTEHRVLDDRRQGHVVIKSKPEKLIYQLMEDH
SSVDPTYVEDFLMTYRSYLPNPQEICRLLLSWFEDVNLRSKVTRVVLLWVNNYYHDFEST
PDMIEFLETFEDKLEENNMTGQLRLLHIAGAAKAKPRTVVLARSDRDSMLSFSIVGGWEK
RMGIFISKVEKGSKAQEVGLRKGDQLLEVNCHNFEHMTKNKALEILKGTTHLSITVKYNT
LAFRDLLASQDGRHNNWGRRPSXEISILQSDPXARLDVGFGMSSKLSPEIKDAKVSKAEK
KMGFATLGKRDKLKKAMAKLSILPNKANISSSPICSPPLSRRTQDDTSTVMKRSPSGSLG
SNPYLSNSNPDLTSISSLSVYEPDYYSSSSNGAGDCPEHVLKIYRADQSCKYFLVHKETT
ANEIVMLAMREFGLTDPGCLGRFSLCEVTVTAEGVVKQRRLSDHQTNIAGRLSLNGRLFL
RNNMASETLMPDEVAVELVKDSNVSFLQLESIEVAVQLALRDYEIFKAIESTDYIDDLFE
LQPRQANERLKKFEELVNQEMFWVIGEVCAEQQIVKRAKIVKQFIRIARHCKDCKNFNSL
FAIVSGLGHGSVSRLRNTWDKIPSKYTKMFEDLQNLMDPSRNMSKYRNLVNAEHVQPPLM
PFFPVVKKDLTFIHLGNDSKVDDLINFEKLRMIAKEVRYITSMGAVPYNPKHLLNPSGGS
GISPGLGFATISSLQGATTLQRKNRHGRRASTIINPKRMWEDAQMARRVKQYLAGLEINQ
NEDELREQSLICEPIPNQGPSNTTTLPRKSVQQPQPPTNASGSISPHRQASPSRQEEKIK
QLIYKDAPKTTFGATSPKHLRKLLSLSEEGDKRSKNLKLERVTKSIDLQKGYHSXPISPI
KARHARTRKQGVGVSAKPGNIATSGLVEHRRRLSPQRSDSGYAGSDAGSTGSGTQQEARR
RHTVDVIRPPAAVNNHRPLRRISHERAIYPPDYHSVSKVVPPKPAPKLYSPPPQEMSERK
QPPVYEVAAARARAFSGNSQEETCDYYDSDNEQVSVV
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaccaggttttctaataacaagaactaaggtgggaatgaagcctaaaatgtca
acgtatattgagccgcatttcatcaagtgcatacagaagctctctgaccaacgaagtcaa
gaggatttgcagagtatttatacctatcttcatgatctggaagcactacggtcgttacga
gagcctgcactacgagagattgcaaaaagtgtgcgttatgagaagagagatgctaatgat
attttatattgccgagatgacctaagtacgtgctggtacatactgctctcgggatccgtc
ttcattgaccatgctatgtacctacctcgaagcagctttgggaaacgtacatcaggaagt
ggtagacgtggacatgattgccttctattggagagctcagagttattagtgattgattac
ccagatgcacagttcttgcacccaggccagagacagtcatgttcccagaacaatctagag
aaactaatggcccttgaacatgatgagcttaaggtgccaaacaatagagggcgttctatg
agcgaggatcgtcatattcagcaatcctacagtgatagtgaggctctaccattaccggtg
ataagactcgaacggacgcagtcattggacagcgagcagaagcatccaatcagcaaaaac
gaagacgtgcaagccctcttgggccacatggacaagaggtcctatttacccataacagtt
gccagtacagccagcatgagtgacagaagctccattcacagtagcatgtccagtagctac
tcggacctcttcccatctggcggggagaatccggacctggatcttagtggccttgtggag
agtacggtagactctgatgatgaagaatccagtgaaacaggatcacttcttgtgagggac
tttgtccgtgattgcctggagaaggatcccatggacaggacggaagatgaaatagaaatt
cttcttgattttatgcggaaccttccggcctttgccaatatgaccatgtcagtacgacga
gcactgtgtgctgtcatggtgtttgctgtcgtagcgaaagctggcactgtcgttatgaaa
gatggcgaggagctggactcctggtcagtgatattaaatggtcatgtggaagttacaaga
aatgagaatgctatagatcaactacatctaggagacagttttggtgtgaagcctaccatg
gaatcacagtatcaccatggagttatgaggactactgttgatgactgtcaatttgtttgc
atagcacaagagcactactttaggatattaacacaaggggaggagaacatcaggcggatc
gaggagaatgggcaattagtgatggtgacagaacacagggtattggatgataggagacaa
ggacatgttgtcattaagtctaaaccagagaagttgatataccaattaatggaggatcat
tcgtcagtagacccaacctatgtagaagatttcctgatgacctatcgcagctacctccct
aatccacaggagatatgtagattattattatcatggtttgaggatgtcaatctgaggagt
aaggtcacaagagtagtgttactatgggtgaataattattaccatgactttgaaagcact
ccagatatgattgaattcttggagacatttgaagataaactagaggaaaataatatgact
ggccagctaaggttattacatatagcaggggcagccaaggcgaaaccaaggacagtggtt
ttggcgcgttcagacagagactccatgctctcgttttccatcgtaggtggatgggagaaa
cgtatgggcatcttcatatcgaaagtagagaagggctccaaagcccaggaagtaggactc
aggaaaggagatcaactcctggaagtcaactgtcacaattttgagcacatgacaaaaaat
aaagcattagaaattctcaaaggcactacacacctcagtattactgtcaagtataataca
ttagcttttcgtgacctattagcctcccaagatggacgtcacaacaattggggtcgacgt
cctagctaagaaatatccatccttcagagcgatcccngtgccaggctggatgttgggttt
ggcatgtcgtcaaaactctcacctgaaatcaaggatgcaaaagtcagcaaagcggagaag
aagatgggctttgcgacattaggaaaacgtgacaaattaaagaaagccatggctaagctt
agtatactgcccaataaggccaatatcagtagttctccaatttgttctcctcctctttct
cgcagaactcaagacgacacttccaccgtaatgaagcgttcgccgtcaggcagtctgggc
agcaacccctacctcagtaatagcaatccggacctgacgtcaatttcatcattatccgtc
tatgaacctgactattacagcagtagtagcaatggggctggggactgtccggagcatgtg
ttgaaaatttacagggctgatcagtcttgcaaatattttcttgtccataaggaaacaaca
gccaatgaaatcgtcatgttagccatgcgagagtttggtctcacagatcccggttgcttg
ggtcgtttttcattatgcgaagtgacagtgactgcagagggcgtcgttaaacaaagacgg
ttatcggatcatcagacaaacattgcaggaagactgagtctaaatggcaggttatttcta
aggaataatatggcttcagaaacacttatgcctgatgaagttgcagtggaattagtaaaa
gacagcaatgtcagcttccttcaattggagagcatagaggtcgccgtacaactcgcatta
cgagattatgaaatcttcaaagccatcgagtcaaccgattatatagatgacttgtttgaa
cttcaacctagacaagcaaatgaaaggctcaagaaatttgaagagcttgtaaaccaggag
atgttctgggttattggtgaagtgtgtgcagaacaacaaattgtgaaaagggctaagatt
gtcaaacaattcatcagaatagcaaggcattgtaaagactgcaagaatttcaactcatta
tttgccatagtcagtggcctcggtcatggctctgtgtcaagattacgtaacacatgggat
aagattccatccaagtataccaagatgtttgaggatctccagaatcttatggatccctca
aggaacatgtcaaaatacaggaatctggtcaatgcagagcatgtacagccaccacttatg
ccattcttccctgtggtcaagaaagatttgacctttattcatctgggtaacgattccaaa
gtggatgatttgattaactttgagaaactgaggatgattgccaaagaggtccgttacata
actagcatgggagctgtgccttataatcccaagcatctgttgaaccccagcggtggatca
ggtatttccccaggcctggggtttgcaaccatcagcagtttacaaggcgccaccacactg
cagcgcaaaaataggcatggaaggcgagcttcaaccatcattaatccaaagagaatgtgg
gaagatgcccagatggcaagacgggtgaagcaatatttagccggtcttgaaatcaatcaa
aacgaggatgaactgagagagcagtccctcatctgtgaaccaatcccaaatcaagggcct
tccaacactacgactctgccacgaaagtcagtccaacaaccgcaaccaccgaccaatgcc
tctgggtcaatctcgcctcaccggcaggcgtcaccgtccaggcaagaggaaaagatcaag
caattgatatacaaagatgcgcctaagacgacttttggcgcaacatcacccaaacatctc
cgcaagttgctgtcgttatcagaagaaggtgataagcgttcaaagaacttgaaactggag
cgagtcaccaagtcaatagacttacagaaaggctaccactccnntcccatttctccaatc
aaagcaagacatgcaagaactcgtaagcaaggcgttggcgtatcagccaagcctggcaat
attgccacatcggggttggtggagcatcgacggaggttaagtcctcagagaagcgatagc
gggtatgcaggcagtgatgcaggttcaacgggtagtggaacgcaacaagaagcaagaagg
aggcacacagttgatgtaatccgaccccctgctgcggtgaataatcacagacctctaagg
cgcatcagccatgagcgcgccatctatccacctgactatcactcggtgtcaaaggtcgtt
ccacctaaaccagcaccaaagttgtattcaccaccaccccaggagatgagtgagcggaag
cagccccctgtgtatgaggttgcagcagctagagcaagagctttcagtggcaattctcaa
gaagaaacatgtgattattacgactcagataatgagcaagtgtctgtggtatga
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