Amphiura filiformis: 140160954
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Entry
140160954 CDS
T10871
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140160954
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140160954
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
PKD_channel
Ank
Ank_4
Ank_3
YVC1_C
Ank_5
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
140160954
NCBI-ProteinID:
XP_072040404
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Position
9:complement(37050735..37179186)
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AA seq
1166 aa
AA seq
DB search
MPAYYHVDASSDRIPLQIVRKELPLSPLEKAYILAVERGDYATVRQHLEEAEIYFNININ
CVDALGRTALLISIQNENIEIIELLLKHNVNVGDSLLHAIDEEVVEAVELLLNHKAPKKD
IRARILQEAQETDFTTDITPVMLAAHRNNYEILKLLLERGASIPKPHNVRCGCDDCISSI
KHDGLRHSRSRLNIYKALASPSLIALSSEDPVLTAFELSWELRKLSHRENEFKLEYDKLV
EQCREFATLLLDQTRGSKELEMILNRDQSSPVGELKLSRLRLAIKYKMKAFTAHPNCQQL
LAEVWYKGLPGWRRQHWTIKIFISLFVGMSFPLLSFMYLVAPKTRLGNISCLPFLKFICH
SASYLLFLVLLLMASLDVGGSQSNRSDERGPPPTDVECLIIAWVCGYVWAEIKQLWDEGL
DEYIRDWWNLLDYIMNNLYITVIGLRVTAYVQLRILKNPDHGMPTLPRHEWDSMDPTLMS
EAVFAVANIFSMLRLIYLFTANSHLGPLQISLGRMVEDIMKFLCIMVLVIMSFGAGMNQL
YWVYRTDGIEEEDLNNTDGVPPDVCFGVRCKDQNNAFTDFFETLQTLVWGIFGQVELHVM
RVSGPHEITEFVGALMFGVYCCIVIIVLLNLLIAMMNNSYQKITDKADEEWKFARSKMWM
SYFDDGSTLPVPFNLVPSPKSIFYFIRATWRSTCGYKRRQNSETRANAKLETAAKRRRFD
DDYQNVIRNLIKRYLKYKGRGERSEGVSEDDLNEIKQDISAFRYEMLEMLKKIGSMPPVP
PGGGGGGDGGGGGGGGGGGGGGGGGGVVGGGGSGGGEANKTKKTENGFANSTIEASASIN
SISSVGSTGSANSATTPQIAQSPSLERLPSYLMRKGKKKKSKPVDDASYKPIKVAPINEN
LDDFSVPDFLKMKNIKNVVSAVNEMKKSTRRRLSGPIAEALLRKAQEMGENVPEDIREED
EEEYDTNDDTSSVDTRRQESVDSSIDGGAGYDSQDLGRDNMGLITEEGPEERRNSNVSRN
GSARAPLRREKAFAGTDHKTEVDGSSDSTTSAAGNQGTEGGADDSQSSSGIASPNSNNSF
QSQDSSEAIGQGTKDKEVDPLPDDDIDNGASPHDSGHVPDGESDMANMVKPGKRTSYLWG
KKKGVDGPDQDVEMTTRYVYNGIQNE
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctattaccatgtggacgcttcaagcgatcgaatccctctgcaaattgtacgg
aaagaacttccgttatccccgcttgaaaaagcctacatattggccgtggaacgtggagac
tatgccaccgtacgccagcacttggaggaagcagaaatctactttaatatcaacataaac
tgtgtcgacgcgctaggtcgaacggctttattaatctccatacagaatgagaatattgaa
atcatcgaactgcttttgaagcataatgttaatgttggagattctcttctacatgccatc
gacgaggaggtggttgaagcggttgaactgcttctcaaccacaaggcgccgaagaaagac
atacgtgcacgaatcttacaggaagctcaggaaacagatttcacaacggacataacacct
gtaatgttagcggctcatcgaaataactacgaaattttgaaattgttactagaaagaggt
gcctcaattcccaaaccacacaatgtccgatgtggctgtgacgattgtatatcgagcata
aaacacgacgggttaagacattcaaggtcacgattgaacatttacaaagctttggccagt
ccatctttgatagcactatcaagtgaagatccggttctgacggcatttgaattgagttgg
gaacttcgtaaacttagtcacagagaaaatgaattcaagttggagtatgacaaacttgtg
gaacaatgtcgggagtttgcaacactactcctggatcagacacgagggtcgaaagaatta
gaaatgatcttgaatcgggatcaatcctcgccagtaggagaattaaagctcagcagactt
cgactggctatcaagtataaaatgaaagctttcactgcgcatccaaactgccaacaactt
ttggcagaagtttggtacaaaggactacccggttggcgtcgacaacattggacaatcaag
atattcattagcctcttcgtaggcatgtcattcccattgctctcatttatgtacctagta
gcgcccaagactagacttggcaacatatcatgtcttccattcctcaagttcatctgccac
agtgcctcgtatttgctgtttcttgtcttattgcttatggcttcgcttgacgttggaggt
agtcaatcaaatcgttcagatgaaagagggcctcctccaactgacgtggagtgtcttatc
atcgcatgggtgtgtggttatgtttgggctgaaataaaacaactctgggatgaaggtcta
gatgagtatatcagagactggtggaatctcctggactacattatgaataacttatacata
acggtcatcggtctacgtgtcactgcctatgttcaactacgaatcttgaaaaatcccgat
catggtatgccaacgctaccaagacacgaatgggattctatggacccaacactaatgtca
gaggctgtttttgctgtcgctaatatatttagtatgctgaggcttatatacctttttacc
gctaactcacaccttgggccgctgcaaatatcactaggccgaatggttgaagatattatg
aaatttctttgtattatggtattagtaatcatgtcttttggtgcgggtatgaatcagtta
tattgggtgtatcgaacagatggcatagaagaagaagatttgaacaataccgacggtgtg
ccaccagatgtttgctttggtgtcagatgcaaggaccaaaacaatgccttcacagacttt
tttgagacgttacagaccttggtgtggggtatatttggacaggtagaattgcacgttatg
cgagtgtcaggacctcatgaaataacagaattcgttggtgcccttatgtttggtgtctac
tgctgtatcgttattattgtgttacttaatttgcttatcgccatgatgaataactcatat
cagaaaatcacggataaagctgacgaagaatggaagtttgcacgttccaaaatgtggatg
agttacttcgacgacggcagtaccctccctgttccgtttaaccttgtgcctagtccaaaa
tcaatattctattttattcgagcaacatggaggtctacatgtggctacaagaggcgacag
aactctgaaactagagctaatgcaaagctggaaacggcagcgaaacgaagaagatttgat
gacgattaccaaaatgttatcaggaatttgatcaagagataccttaaatataagggacga
ggtgagaggtcagagggtgttagtgaggatgatctcaatgagatcaaacaggacatctct
gcattcaggtatgaaatgcttgagatgcttaagaaaattggatcaatgcctcctgttcct
cctggtggcggtggtggcggtgacggcggtggtggtggtggcggcggtggcggcggtggc
ggtggtggtggtggcggcgtcgtcggtggcggtggtagcggaggaggagaagcgaataaa
acgaagaaaacagaaaatggttttgcaaacagtacaatagaagcttctgcatcaattaat
tccatatcatcagtagggtcaacagggtcagcaaactcagcaaccacgccacaaattgca
caatctccctcactcgaaagactaccgtcgtatttaatgcgaaaaggtaaaaagaaaaag
tctaaacctgttgatgatgcttcttataaaccaataaaagtagcgccaattaatgaaaat
ttggatgatttctccgtccccgactttttgaaaatgaaaaatatcaagaacgtagtcagt
gccgtgaatgaaatgaaaaaatctacgagaagaaggctttcgggacccattgcagaagca
ttgttacgaaaagcgcaagaaatgggtgaaaatgttccagaagacatacgggaggaagac
gaagaggagtatgatacaaatgacgatacgtctagtgtggatacaaggaggcaggaaagt
gttgattcttcaatagatggaggtgctgggtacgattctcaggacttaggtagagataac
atgggattgattactgaagagggtcctgaagagcgcaggaattcaaatgttagcaggaac
ggttcagcccgggctccattacgacgtgagaaagcttttgctggtactgaccataagaca
gaagttgatggctcttcagattccaccacatcagctgctgggaatcaaggaacggaggga
ggtgctgatgattcacagagttcatccggtattgcatcacctaacagtaataacagcttt
caatctcaggattcgagtgaagctattggacaaggtacgaaagataaggaggttgatcca
ttacccgatgatgacatcgacaatggagcttcgcctcatgattcaggacatgtacccgat
ggggagagtgatatggcaaatatggttaaaccaggaaaaaggacatcgtatctatggggc
aagaaaaagggcgttgatggacctgatcaagatgtagaaatgacaacgcggtatgtgtac
aatggaattcaaaatgaatag
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