Amphiura filiformis: 140162414
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Entry
140162414 CDS
T10871
Name
(RefSeq) short transient receptor potential channel 1-like isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140162414
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140162414
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ank_2
Ank
Ank_3
TRP_2
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
140162414
NCBI-ProteinID:
XP_072041737
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Position
10:2561174..2692427
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AA seq
991 aa
AA seq
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MMNGVGGFPVFTPRPTPGYNPVYGPGYGPDNAPGMNNDPAMQRPGGDYTGPDAQGNFPEV
EEPIIAPSTAEEQEFGNPFSGMFGDGTSRGSELHDDDEKMAKYQDSFLRRISQLEGGEAL
GTFLDAVRNSDTEVAEHVLKDKDPSSPAKNEENLRAALIIAIKSRHIEMVKMLLEHKAPI
GNAFFHAVDGSSTPVVKVLCDHLKGKKAMVDSAVNSFSEDPEFPTTTTPLMMAASENEHE
ICELLIGIGAELPTLEDTLARVGSSRDIYERALTRLHWHKAMSSEAYLLFSSPDPIQAAF
EAGLKIEETRKDQLTHIKPEYKELKQTLDKFLTNYLEMIQNTTEIATMLSGEEASNNNNS
NNNNKDNNKSTKSLPVRLLYAIDLKFKSFIAHNNCQQYILDRWYLYHQEWEELPMSHFVL
RTALIFILMPLLCVIYIIFPLMWVKRFMKMPFVRFVLSMASRLFFLALLMYNTIHSAGPD
LPPIAASGGEDAPTRSPEEYNKARIEHYLEYRGCPAHMGVWLIYVWIVGMTWRELKELWR
QGFKEYLAEAFNWVDIIQLIFYWISLILNFISYLAALKKIRSPGWESWDSCSVDIDEEDG
DELGSETHLFVVEEKGPEDPRAVHAKFECEDRTDWNPYDPLLVAEGCFALATVLTFLGAL
RDTVILSFVGPLRISLGGMIVDIIRFFVIFFFLWVSFSIGLTQLYETFCVLEVLKCEAGE
DCHPAFLSFYSTMGTLFWSLFDLADTEELEVDPSAGMVFTEGVGLFLYAAYLVIAVVVML
NALIAMMSNTYTRVEENAELEWKVERTKLMVDYMVNCPTMPPPFNLVPTPKSFVRLFTRC
YKCCFLRSSTKRKKLDRERDRSVREKQYKLFIQNLTDRYINDLKSRQLDDDSERLYMDLS
TLKETLRMMRNQMRDIQSANTRTHKNVEACVHGLSDMMERQKRLEEEQKRQGELLTNAPL
PPSGLPSPPPVSPQPPRREPGESIRPKKRSR
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacggtgtagggggattccccgtgttcaccccgcgcccgaccccggggtacaac
cccgtgtatggacctgggtatggacctgataatgctccgggtatgaacaacgacccggcc
atgcagcgaccaggaggggactacacagggcctgatgcccaggggaattttcccgaagta
gaggaaccaattatagcaccatctacggctgaggaacaagagtttggcaatcctttctcc
ggtatgtttggtgacggtacatccagaggatctgagttacacgatgatgatgaaaagatg
gctaaatatcaagactcttttttgaggcggataagtcagcttgaaggaggtgaagcatta
ggaaccttccttgatgcagtacgcaacagtgatacagaggtggcagaacatgtattaaaa
gacaaagatccttcgtcaccagctaaaaatgaagagaatttgcgagcggcacttataatt
gcaatcaaaagccgacatatagaaatggtcaaaatgctgttagaacacaaggcgcctatt
ggcaatgcattcttccacgctgtggacggttcatctactccagtcgtcaaggttttatgt
gatcatctaaaagggaaaaaggccatggtggatagtgcagtaaactccttttcagaagat
cctgaatttcctaccaccacaacacccttgatgatggcagcaagtgaaaacgagcacgag
atatgcgagctcctcatcggcattggtgccgagcttcctacgttagaggacaccctcgcc
agagttggcagctcacgggacatttacgagcgcgccctcactcgtcttcactggcataag
gccatgtctagcgaggcatacctactattttcatcgcccgaccccatccaggcggcattt
gaagccggtctcaaaatagaagaaaccagaaaagaccaactaacacacattaagccagaa
tataaagaactgaaacaaactttggataagtttctcaccaattatttagaaatgattcaa
aacactacagagattgctacgatgttgagcggagaagaagcaagcaacaataacaacagc
aacaacaacaacaaggacaacaataagtcgacaaaatctcttcccgtgagactgctctac
gctattgatctcaaatttaaatcgtttatagctcacaataactgccaacagtacatatta
gaccgttggtacctgtatcatcaggaatgggaggaactaccgatgtcacacttcgtcctc
cgtacagctctcatatttatacttatgccgcttctctgtgttatttacatcatctttcct
cttatgtgggttaaacgttttatgaaaatgccatttgtacgcttcgttttatcaatggct
tctcgcttattttttttggcgttgctaatgtacaataccatacattcagcagggccggat
ctcccgccgattgcggcttctggaggtgaggatgcgcctactagaagtccggaagagtat
aacaaagcgaggattgaacattatctcgagtaccggggatgtcctgcgcacatgggcgta
tggctcatctatgtttggatcgttggtatgacttggcgtgaattgaaggagctttggcga
cagggatttaaggagtacctagctgaggctttcaactgggtggacattatccaactaata
ttctattggatatctctcattctcaactttatctcttacttggcggcattaaagaaaata
agatcgccaggatgggaatcttgggatagttgttccgtagatatagatgaggaggatgga
gacgagcttggaagcgaaactcacttgtttgtagtggaggaaaaaggaccggaagatcct
cgagccgtccatgccaaatttgaatgtgaagatcgtactgattggaacccatatgatcca
ctcctggtcgccgagggctgcttcgccctcgccactgtgttaactttcttgggggctcta
cgggacacagttattctgagcttcgtgggtccgcttcgaatcagtcttggtggtatgatt
gttgatatcatcaggttctttgtgatcttctttttcctgtgggtatcatttagcattggg
ttgacgcagttgtacgaaacattctgcgtcctggaggttttgaaatgtgaggcaggagaa
gactgccatccagcttttctttcgttttacagcacaatgggtacattgttttggtcactc
tttgacttggccgatacagaggagctggaagtcgacccatcggccggaatggttttcaca
gaaggcgtagggctgttcttatatgctgcgtacctagtcatagctgttgttgttatgctg
aatgctctcattgctatgatgagcaatacgtacacacgtgtggaggaaaacgctgaatta
gaatggaaagttgaacgtaccaaacttatggtggactacatggtcaactgcccaacaatg
ccgccgccatttaatctcgttccgacgccaaagtcctttgtgagactcttcacgcggtgt
tacaaatgttgctttttgaggtcgtcaacgaagaggaaaaagttggacagagaaagagat
cgatctgtccgagaaaaacagtataagcttttcattcaaaacctgactgaccgttacatc
aatgacttgaaatcgcgtcagctggatgacgacagtgaacgcctttatatggatttgtct
actttgaaagaaacactaagaatgatgaggaatcaaatgcgagatatccaatccgcaaac
accagaacgcacaaaaatgttgaagcttgtgtacatggtctgagcgatatgatggagcgg
caaaagcgtctagaagaggagcagaagagacagggggaactacttacgaatgctccacta
ccgcccagtggtttgccgtcaccaccgcctgtttcgccacaacctccacgtcgcgaaccc
ggcgagagcatccgcccgaagaagcgcagcaggtag
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