Agrilactobacillus fermenti: ACNAN0_03510
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Entry
ACNAN0_03510 CDS
T10827
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
afk Agrilactobacillus fermenti
Pathway
afk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACNAN0_03510 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afk03019
]
ACNAN0_03510 (rny)
Messenger RNA biogenesis [BR:
afk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACNAN0_03510 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
KH_2
UstYa
DUF350
EpuA
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
XOU37981
LinkDB
All DBs
Position
727921..729483
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AA seq
520 aa
AA seq
DB search
MNLWILIILAIIMLVVGVFTGYAVRKHGHEKELNEATQTAAGIITAAKKEAETAKKEAIL
EAKEASHQYRQSQEDELKQRRAEVQKQENRMIQREELLDRKDDSLDKKEQALDDREAKLN
QRRQQLDGEQKEISKTLEKQQTELERIANLSEDEARDIILDKTKDDLEHDRAQMIKNSVQ
NAKEVADRKAKDLIAEAIQRSAADVVSETTVTVVNLPNDDMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVVLSGFDPIRREIARMALEKLIQDGRIHPARIEEMVDKSRKEMDSRIR
EIGEQAVFDLGIHTIHPDLIKIIGRLNFRTSYGQNVLNHSMEVAKLAGVLAAELGEDVSL
AKRAGLLHDIGKALDHEVDGSHVEIGVEIAKKYKEPATVINTIASHHGDVEPSSVIAVLV
AAADAISAARPGARSESLENYLHRLNKLEEITNSFKGVDHSFAIQAGREVRVIVQPKDVS
DDQTVILAKDIRDRIENELQYPGHVKITVIRETRTIEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttggattctaataatcctcgcaatcatcatgctggttgttggtgtttttacg
ggctatgctgttcgtaaacatggccatgaaaaagagctgaatgaagcaactcaaacagct
gcggggattatcacagctgccaagaaggaagctgaaacagcaaaaaaggaagccattctt
gaagctaaagaggcttcgcatcaatatcgtcaatcacaagaagacgaattgaagcaacgc
cgtgctgaagttcaaaaacaagaaaatcggatgatccaacgtgaagagttgttggatcgt
aaagacgattcattggataaaaaagaacaggctttagacgatagggaagcaaagctcaat
caaaggcgacaacagctcgatggtgagcaaaaagaaatttctaaaactcttgaaaagcag
caaactgaattggaacgtattgctaatttgtcagaagatgaagcgcgtgacatcatcttg
gataaaaccaaggatgacttggaacatgatcgtgctcagatgattaaaaatagtgtacaa
aacgccaaagaagtggctgatcgcaaagccaaagatttgattgcagaggcaattcagcgc
agtgctgctgacgttgtttctgagacaactgtaacggtggtaaatcttcctaatgatgac
atgaaggggagaattatcggtagagagggtcgaaatatcagaactttagagacgttaact
ggtattgatttgattatcgatgatacgcccgaggcagtcgttttgagtggatttgatcca
atcagacgtgaaattgctcggatggctttggaaaaattgattcaagacggtcggattcat
ccggcacgtattgaagagatggtcgataagtctcgtaaagagatggatagtcgaatccgt
gaaattggtgaacaagctgtttttgacttaggcattcatacaattcacccagacctgatc
aaaattattggtcgcttgaatttccgaacaagttacggacaaaatgtattaaatcactct
atggaagttgcgaaactagcaggtgtgttagctgctgaacttggagaggatgtttcttta
gctaaacgcgctggattattacacgatattggtaaagcgttagatcacgaagtagatggc
tcacatgttgagatcggtgttgaaattgcaaagaaatataaagaaccggcaacagtaatc
aatacgattgcttcacatcacggcgatgtggaaccatcaagtgttattgccgtattggtc
gctgctgctgatgcaatatccgctgcacgacctggtgcaagatcggaatcattggagaat
tatttacatcgtttgaataaactagaagaaatcacgaatagtttcaagggtgtggatcat
agttttgcaattcaagctggacgtgaagtacgtgttatcgttcaacctaaagatgtttct
gatgatcagactgttattttggctaaagatattcgtgaccgtattgaaaatgaattacaa
tatccaggacatgtgaaaattacagtcattcgtgaaacacggacgattgaatatgcaaag
tag
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