Anoxybacillus flavithermus: Aflv_0097
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Entry
Aflv_0097 CDS
T00790
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
afl
Anoxybacillus flavithermus
Pathway
afl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Aflv_0097 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afl03021
]
Aflv_0097 (rpoB)
03400 DNA repair and recombination proteins [BR:
afl03400
]
Aflv_0097 (rpoB)
Enzymes [BR:
afl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Aflv_0097 (rpoB)
Transcription machinery [BR:
afl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Aflv_0097 (rpoB)
DNA repair and recombination proteins [BR:
afl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Aflv_0097 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ACJ32481
UniProt:
B7GJ59
LinkDB
All DBs
Position
108077..111646
Genome browser
AA seq
1189 aa
AA seq
DB search
MNQLTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIED
FTGNLSLEFIDYSLGEPKYSVEESKERDVTYAAPLRVKVRLINKETGEVKEQDVFMGDFP
LMTETGTFIINGAERVIVSQLVRSPSVYYSGKVDKNGKRGFTATVIPNRGAWLEYETDAK
DVVYVRIDRTRKLPVTVLLRALGFGSDQEIVDLLGDNEYIRNTLEKDNTESTEKALLEIY
ERLRPGEPPTVENAKSLLISRFFDPKRYDLASVGRYKINKKLHIKNRLFGQRLAETLVHP
ETGEVIAEKGTVLDRRTLDRILPELEKGIGIRKYQPLGGVVEDEFALQAIKIYAPNDPDG
EKVITVISNGYIPETVKHITPADIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQ
NQFRIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIAAIKEFFGSSQLSQFMDQTNPL
AELTHKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSTYAKV
NKFGFIETPYRRVDPETGKVTNQIDYLTADEEDNYVVAQANVPIAEDGTFLEENVVARFR
GENIVVKRDRVDYVDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPI
VGTGMEYVAAKDSGAAVICKHRGIVERVEAKEIWVRRLIEVDGKEVKGDLDKYRLLKFVR
SNQGTCYNQRPIVKAGDIVEKGEILADGPSMEKGELALGRNVLVAFMTWDGYNYEDAIIM
SERLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIVRIGAEVK
DGDLLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFTRED
GDELPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPFLPDGTPVDIML
NPLGVPSRMNIGQVLELHLGMAARKLGLHVASPVFDGAREEDVWATLEEAGMARDAKTVL
YDGRTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGE
MEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQS
LGMDVTVLSSDEKEISMENFGEDDDVQPVDIIPPTDESAKEDEGVVVKE
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcagttgacaggtcaactagttcaatacggacgacaccgccaacgaagaagttat
gcgcgcattagtgaagtgttagaactaccaaacttaatcgaaattcaaacttcttcttac
cagtggtttctcgacgaaggattgcgtgaaatgtttcaagatatttcaccgatcgaagat
tttacagggaatttgtcactagaatttattgattacagcttaggagaaccgaagtactct
gtcgaagagtcaaaagaacgcgacgttacatacgcagcaccgcttcgggtgaaagtacgc
ctaatcaataaagaaacaggtgaagtaaaagaacaagatgtatttatgggggatttcccg
ttaatgacagaaacaggcacgttcattattaatggtgctgaacgcgttatcgtttctcag
cttgttcgttcaccgagcgtatattacagcggaaaagtagataaaaacggaaaacgtggc
tttacagctaccgttattccaaaccgcggtgcatggcttgaatatgaaacagacgcaaaa
gacgttgtgtacgttcgcattgatcgtacgcgtaaattgcctgtgaccgtgttattgcga
gcgttaggttttggttcagaccaagagattgtcgatttacttggtgataacgagtatatt
cgtaatacgctagaaaaagacaacacagaaagtacagaaaaagcgttgcttgaaatttac
gaacggttacgtccaggggagccgcctaccgttgaaaacgcaaaaagcttgctcatctct
cgtttctttgatccaaaacgatatgatttagcaagcgttggtcgttataaaattaacaaa
aagctccatattaaaaaccgtttattcggtcaacgtttagcagaaacgctcgttcatcca
gaaacgggtgaagtgattgctgaaaaaggaacggttcttgatcggagaacgctcgaccgc
attttacctgagcttgaaaaagggatcggtatacgtaaataccaaccgcttgggggcgtt
gtcgaagatgagtttgctttgcaagcaatcaaaatttatgctccaaacgatccagatggc
gaaaaagtcatcacagtcattagtaatggatatattccagaaacagtaaaacacattaca
cctgcagatattattgcatctattagctacttctttaacttattgcatggcgtcggtgat
acagacgatatcgaccacttaggaaatcgtcgacttcgttctgttggggagttgctgcaa
aatcagttccgaatcggtctttcgcgcatggagcgcgtcgttcgtgaacggatgtccatt
caagatacaaacacaattacaccacagcagctcattaatattcgtccggtcattgcggct
attaaagaatttttcggaagctcgcagttgtcgcaattcatggatcaaacgaacccacta
gccgaattgacacataaacgtcgtctttctgcgcttggtccgggcggtttaacgcgtgag
cgtgctggttttgaagtgcgtgacgttcactattcacactatggtcgcatgtgtccgatc
gaaacgccagaaggtccgaacatcggattaattaactcgctttcgacatatgcaaaagtg
aataaatttggctttattgaaacaccttatcgtcgtgttgatcctgagacaggaaaagta
acgaatcaaattgattatttaacagcggatgaagaagacaattacgttgtggctcaagca
aacgttccgattgcggaagatgggacgtttttagaagagaacgttgttgctcgtttccgc
ggtgaaaacattgtcgttaaacgtgatcgtgtcgattatgtagacgtttcaccaaagcaa
gttgtatcggtagccacagcgtgtatcccattcttagaaaacgatgactcaaaccgtgcg
cttatgggtgcgaacatgcaacgtcaagctgttccacttatgcaaccggaagcgccaatc
gttggtacaggaatggagtatgtggcagcgaaagactctggtgctgcagtcatttgtaag
catcgcggaattgttgagcgagtcgaagcgaaagaaatttgggtacgccgtttaatcgaa
gtcgatggaaaagaagtcaaaggtgacttagataaatatcgtctgttgaagtttgttcgt
tcaaaccaaggaacgtgctacaatcaacgcccgattgttaaagcgggtgacattgtagag
aaaggtgaaattttagctgacggtccatcgatggaaaaaggcgagttagcactcggtcgc
aacgtgcttgttgcgttcatgacatgggatggatacaactacgaggacgcgattattatg
agcgagcgtctcgtgaaagacgatgtgtatacatcgattcatatcgaggaatacgaatct
gaagcgcgcgatacaaagctcggcccggaagaaattacgcgcgatattccaaacgtcggt
gaagatgcgcttcgtaacttagatgaacgcggtattgtccgcatcggtgcagaagtaaaa
gatggagacttgcttgtcggtaaagttactccaaaaggtgttacggagttaactgcagaa
gagcgcctattgcatgctatctttggcgagaaagcacgtgaagttcgagacacatcttta
cgcgtaccacatggtgggggcggaatcgttcttgatgtcaaagtgtttactcgcgaagac
ggcgatgagttgccgccaggtgtaaaccaacttgttcgtgtgtacattgtacaaaaacgg
aaaatttccgaaggtgacaaaatggcaggacgccatggaaataaaggggttatttctcgc
attttacctgaagaagatatgccgtttttaccagatggcacaccagttgacatcatgtta
aacccattaggtgtaccttcgcgtatgaacattgggcaagtgcttgagttgcatctcgga
atggcggcgagaaagttaggtcttcatgtcgcttcccctgtatttgacggcgctcgtgaa
gaagatgtatgggcgacgttagaagaagcaggaatggcgcgcgatgcgaaaactgttcta
tacgacggacggactggagagccgtttgacaaccgtgtttctgtcggtattatgtacatg
attaagcttgcgcacatggttgatgataaattgcatgctcgttcgacaggtccgtactcg
cttgtcacgcaacaaccacttggcggaaaagcgcaatttggtggtcagcgttttggtgag
atggaagtatgggcgcttgaagcatatggtgcagcttatacgttgcaagaaattttaact
gtcaaatcagatgatgtcgttggtcgcgtgaaaacatacgaggcgatcgtgaaaggcgag
aacgttccagaaccaggcgttcctgaatcgttcaaagtattaattaaagagctacaaagc
ttaggtatggacgtcacggttttatcaagtgatgaaaaagaaattagcatggaaaatttc
ggggaagatgatgacgttcaaccagttgacatcatcccacctacagatgagtcagccaaa
gaagatgaaggcgttgttgtaaaagaatag
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integrated database retrieval system
