Anoxybacillus flavithermus: Aflv_1059
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Entry
Aflv_1059 CDS
T00790
Symbol
recQ
Name
(GenBank) Superfamily II DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
afl
Anoxybacillus flavithermus
Pathway
afl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Aflv_1059 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afl03019
]
Aflv_1059 (recQ)
03400 DNA repair and recombination proteins [BR:
afl03400
]
Aflv_1059 (recQ)
Enzymes [BR:
afl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aflv_1059 (recQ)
Messenger RNA biogenesis [BR:
afl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Aflv_1059 (recQ)
DNA repair and recombination proteins [BR:
afl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Aflv_1059 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
zf_C2H2_13
Motif
Other DBs
NCBI-ProteinID:
ACJ33435
UniProt:
B7GHL3
LinkDB
All DBs
Position
1057107..1058591
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AA seq
494 aa
AA seq
DB search
MKFGLRWQGGRGKMLNILKERFGYDSFRMGQREIIEDVLKGRNCVAMLPTGGGKSLCYQL
PGYILNGSVLIISPLVSLMEDQVQQLKNRGEKRVVALNRFLSYREKQDVLRELASYRFIY
ASPEILQSPLLIEALTRINISLFVVDEAHCISQWGHDFRPDFLKLGLLRQTLGNPPCLAL
TATATRQVIADIVTTLKLDDVKQHIYPLDRPNICLYVQYVQTVEEKIKALKQLVATLPKP
GIVYVASRQWAETLAEVLRDDHRVSYYHGGMDGEQRLLIQQQFVYDQLDVICCTNAFGMG
VDKPNVRFVIHFHLPTQPEAYWQEVGRAGRDGNESIAILLYASGDEQMGQLMIDMEFPTK
EQIVYALDALRHGRKEMGLTDVQQRLLLYWLEQMNMQEDIHTLANQLYAHIEQRKQEKIK
KWVFMQRWLNEQTCRRRTMLSYFEQQTLPNERCCDRCGADIYVNAPVKHIQQIHLRPWQE
ELCSMFAIKVRTND
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattcggcttgcgttggcaaggtgggagagggaagatgcttaacatattaaaggaa
cgatttggttacgattcgtttcgcatggggcaaagagaaattattgaagatgtgctgaag
ggacgaaattgtgttgctatgcttccgactggagggggaaagtcgctttgttatcagctc
ccgggttatatattaaacggcagtgtgttaattatttccccactcgtttcgcttatggag
gatcaagtacagcagcttaaaaatcgcggtgaaaaacgtgttgtagcgctcaatcgtttt
ctgtcttatcgcgaaaaacaagatgtgttgcgtgagttagcatcgtatcgttttatttat
gcttcgcctgaaattttacaatcccctttacttatcgaagcgttaacacggataaacatt
tcgttgtttgtcgtagatgaagcacattgtatttcacaatgggggcatgattttcgccct
gactttttaaagctcggtcttcttcgccaaacgctcggcaatccgccatgtttagcgcta
acggctacagctacacgtcaagttatcgctgatattgtaacgacgcttaaactcgacgac
gttaaacaacatatatatccgctcgatcgcccaaatatttgtttatacgtgcaatatgtt
caaacggtagaagaaaaaatcaaggcgttaaaacagcttgtcgccacgttacctaaaccg
ggaattgtgtatgtagctagtcgacaatgggcagaaacattagcagaagtgcttcgtgac
gatcatcgcgtaagctattatcatggcggtatggatggtgaacagcgacttcttattcaa
caacagttcgtttatgatcagttagacgtcatttgttgtacaaatgcgtttggaatgggt
gttgataaaccgaacgttcgctttgttatccattttcacttgccgacacaaccagaagca
tattggcaagaagttgggcgcgctgggcgcgatggaaacgaaagtattgccatattattg
tatgcctcgggcgatgaacaaatgggacaattgatgatcgatatggaatttccgacaaaa
gaacaaattgtctatgcattggatgctctacgccatgggcggaaggaaatggggttaaca
gacgtgcaacaacgtcttttattgtattggctagaacaaatgaatatgcaagaagatata
cacacgttagccaatcaactatacgcccatatagaacaaagaaaacaagaaaaaataaaa
aaatgggtatttatgcaacgatggctaaacgaacaaacttgtcgtcggcgtacgatgctt
tcatattttgaacaacaaacacttccaaatgagcgttgctgtgatcggtgtggcgctgat
atatacgtaaacgctcctgtaaaacatattcaacaaatacatttgcgcccgtggcaggaa
gagctctgttccatgtttgcaataaaggtgaggacaaatgattaa
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