Apis florea (little honeybee): 100863327
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Entry
100863327 CDS
T09140
Name
(RefSeq) collagen alpha-3(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr04512
ECM-receptor interaction
aflr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100863327
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100863327
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aflr00535
]
100863327
Proteoglycans [BR:
aflr00535
]
Extracellular matrix (ECM) proteoglycans
Others
100863327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
100863327
NCBI-ProteinID:
XP_003692315
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MYFSVWIFLFVQFTYTQYIFGEESIPDFVHGPCEGYKQGEDDLQTIDFISKLKLDLLETH
YTGVTRVRGSNRMQTAYRLEKDTDISLPTKNIFPNGLPEEFSVVCTFRARKLSKYTWHII
KIVDMENEPQFLIAMNPKGQTLDLFVKSQTGETQIVSFSADHIFDKNWHKIDIGVFKDRL
VVYIDCEYIDTQDVKPWGPIKVDGEISISKMLHSKLTIPIDIQWMVLNCDPTRPERETCE
ELLKGLNSPLLPQRRLGCEIICPQGSPGINGTNGLPGLPGLPGPPGPIGEPGIPGHPGLQ
GPPGEQGKIGPQGFIGARGFTGGPGPKGSSGPIGPPGPKGERGERGDMGFPGLKGDQGLP
GPRGYPGPPGNISDYRDSLSRFTGLPDPQGYPGQNGSKGEKGNRGDKGEQGQKGEAGEKG
YPGQNGSPGIEGKSGLPGFPGLKGEMGFPGIPGPQGLPGPPGEIGAPGIQGAKGEAGEPG
RDGLPGSIVGSIVPGLPGPQGSPGIPGEDGLPGIKGEPGLIGPPGLPGLQGKNGPPGSPG
PPGLQGLSGEPGSPGPQGIDGPIGKPGLPGRDGQPGNKGDKGQQGEQGSVGPRGLPGSIG
APGLPGIAGIPGLDGRSGLPGPPGPPGPPGSPGTTTDMLSTNNVLETIGNPGVSGPRGLP
GAPGLPGERGPSGERGPEGKIGLPGMPGKDGSPGLQGPPGIRGQTGIPGVQGPPGRSITD
SEIRDICASVLREQMTEMAAQIQGPPGPPGRGRPGRPGSPGPQGRPEKLKELTEGLRGPP
GLPGLARQGRPGRAGTQGIPGDPGLPGLPGERGFVGLPGPQGHIGPQGPPGERGEKGDRG
PEGVGVEGSMGPRGPPGPPGNDGIGLPGRQGERGESGRPGIPGMRGPPGPQGLPGFCELC
NYSSANYLQYTRGNEKGP
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtacttctcagtatggatattcctatttgtgcaattcacatatacacaatatattttc
ggcgaagaatctattccagatttcgtacatggaccatgcgaaggttacaaacaaggtgaa
gatgatcttcaaacaatcgactttatcagtaaattgaaattggatcttttggagacacat
tacactggtgtgacacgagtgagaggtagtaatcgtatgcaaacagcatacagattggaa
aaagacactgatattagcctgccaaccaaaaatatatttccaaacggattgccagaggaa
ttcagtgtagtttgcacattcagagccagaaaactatcgaaatatacttggcatattatc
aaaatcgtcgacatggaaaacgagccccagtttttaatcgcaatgaacccaaaaggtcaa
actttggatttgttcgtgaaaagccaaaccggtgaaacgcaaatagtgtcattctcagcc
gatcatatattcgataagaattggcacaaaattgatattggagtcttcaaagataggctg
gtagtatatatcgattgcgaatacattgacacacaagacgtgaagccatggggtccgatc
aaagtggatggtgagatctcgatatcaaagatgttgcacagtaaactcactataccgatc
gatatacaatggatggttttaaattgcgatcctacgagacctgagagagagacctgcgag
gaattactgaagggccttaacagccctttattacctcagagaagacttggctgtgaaatt
atctgtccacagggatctcctggaattaatggcactaatggtttacctggtctacccgga
ttacctggcccacctggaccaattggagaacccggtatacctggacatccgggtttacaa
ggaccacctggcgagcaaggcaaaatagggccgcaggggtttattggtgcacgaggattt
actggcggtccaggtcctaaggggtcttctggacctattggaccacctggtccaaaagga
gaacgtggggaaagaggtgacatgggatttccaggattgaaaggagatcaaggtcttcca
gggccacgaggttatccaggacctccaggaaatattagcgattatcgcgattctttatca
cgatttacaggattaccagatcctcaaggatatccaggccaaaatggttcaaaaggagag
aaagggaatcgcggcgataaaggggaacaaggccaaaaaggtgaagcaggagaaaaaggt
tatccaggtcaaaatggatctcctggaatagagggaaaatcaggacttcctggttttcca
ggtcttaaaggagaaatgggatttcctggaataccaggtccgcagggattgccaggtcct
ccaggtgaaattggcgctcctggaattcaaggagcaaaaggagaagctggagaacccggt
cgtgatggtttaccaggttcaatagttggttcaatagtaccaggactgcctggtcctcaa
ggttctcctggaatacctggagaagacggtcttccaggaataaaaggagaacctggtctt
attggtccaccgggtcttccaggattacaaggaaaaaacggtcctcctggttctccagga
ccaccaggattacaaggtttatctggagaaccaggttctccgggtcctcaaggaatagat
ggccctattggaaaaccaggattaccaggacgcgatggacaacctggaaataaaggtgat
aaaggtcagcaaggagaacaaggatctgtcgggccacgtggtttacctggaagtattggt
gcgccaggtttacctggaattgctggtattccaggattagacggacgatcaggtttacca
ggtcctccaggacctcctggaccaccgggttcacctggaactactacagacatgttaagt
acaaataatgtattagaaactattggtaatccaggagttagtggacctagaggtctacca
ggtgcaccaggattaccaggtgagagaggaccttctggagaaagaggtccagaaggtaaa
ataggattacctggaatgccaggaaaagatggaagtccaggacttcaaggaccaccagga
attagagggcaaactggaataccaggagttcaaggaccaccaggccgtagtattactgat
tcagaaattcgagatatatgtgccagtgtgttacgagagcagatgactgagatggcagca
caaatacaaggtccacctggtccacctggccgaggccgtccaggtcgtcctggatcacct
ggtccacaaggtcgtccagagaagctgaaagaattaacagaaggtctacgaggaccaccc
gggttgccggggttggcccgacagggccgtcctggtcgagccggaacccaaggcatccca
ggtgatccaggtcttccaggtttgcctggggaacgtggttttgttggtttaccaggacca
caaggtcatataggacctcaaggtccacctggtgaacggggagaaaagggtgatagaggt
ccggaaggtgttggtgtagaaggttctatgggtccaagaggaccgcctggaccacctggc
aatgatggcattggattacctggaaggcaaggagaacgtggagaatcaggcagaccaggt
attcctgggatgagaggaccacctggaccccaaggattacctggtttttgtgagttatgc
aattattcaagtgctaattatttacaatatactcgtggcaatgagaaaggaccctaa
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