Aspergillus fumigatus: AFUA_3G10240
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Entry
AFUA_3G10240 CDS
T01017
Name
(RefSeq) Ccr4-Not transcription complex subunit (NOT1)
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
afm
Aspergillus fumigatus
Pathway
afm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFUA_3G10240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afm03019
]
AFUA_3G10240
Messenger RNA biogenesis [BR:
afm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AFUA_3G10240
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AFUA_3G10240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
Motif
Other DBs
NCBI-GeneID:
3511888
NCBI-ProteinID:
XP_754595
UniProt:
Q4WXP6
LinkDB
All DBs
Position
3:complement(2642482..2649693)
Genome browser
AA seq
2327 aa
AA seq
DB search
MTFPPPPPSSQSSIASGTDKLSSNRAARSQQSAWGLSASQSSIRRGLTPLATNNLSSSSI
PSANSRGPVQSTSPAPGGSTSSPLTSSFSAVLSSARGLPGGRSVPSPASTPSPFTTFQSG
SQQHQQSGQSLSSPKFRAHTPSSHLASAAGSIAGGGGSGGGGGGTGSSRGATFSPLLSGN
TVNSPTGFPSDKPGSAASGAAAHAGQSSLTKISIAQVFLLLDSITEKEGREKWETKAAQI
HKLVESNGMEVFSKYFRRLLTGNAPQIFPGVNKSVENAGNYPLLVQEMQKVTQDIEQAQK
IAETVDTSEGDIFRDFDLSTFLDHFKLDPVAKVALALAFKTANKSDLRAKADAILSNSVT
PFLQSLATPSEASKDFKNSFIGMTIERQISVRSESALPEIRRGDAIRGCFCATNVQFLNP
RYTLVRQLHSRGPRATSNVDAVNEAVNSAGPDAWNEEHIASALLFLVLSQYWQDFSLETF
LRAVKSHYVDRQINWSFIFRNFDREGLRLDPKQFAKLYSVLLSAAADDSTLDIQKLWGGD
WEHRDTQMSFLTALIVSRTDVSQIPNLRATFPADFFADGPELVRLQGERATKSPLRSLDA
MKAIFDIALFSQAAWAAAESQLLIKAVVQYDLPVFLCSALALPQPWTSVQQSFVLRTLVV
FILKQEEGYQLALHGAWRQDRQWVAEQLFTTFTQDPTSTAAIYEHAVEFDWLDYLLGYTN
GLAMDLACYAHRKGPFDLEQWVRNAAQKGPMDMGNLLSKYLRIKAEDELHVQRKEQPAPQ
MVSLSVKTVYTLLSVLEEYVGDRENLTPVQRICIQTYPRLINYGEGFDDIIDANGENGNA
LPETIDKQMQELFGKMYHEELSLREILELMRRYKTSRDPAEQDLFACMVHGLIDEYHCYH
EYPLEALTKTAVMFGGIINFRLVDGITLKVGLGMILEAVREHDIHDPMYKFGVEAIEQLI
SRLPEWAGFCHLLLQIPTLQGTPIFQKAEEVLREQGSQVRDSDPGRLENATGASITNGTL
DESAPDGPTRKFLSIHVDPPLRPEIYHDPDEEVQDKILFVLNNVSEQNIEEKLHDLTDVL
RDQHHQWFASYLVEERAKLQPNFQQLYLDLLDRINDKILWAEVLRETYSSVCKLLNAEGT
INSSTDRGHLKNLGSWLGSLTIAKDKPIKHKDIYFKGLLLEGYDSQRLTIVIPFTCKVLV
QATKSTVFKPPNPWLMDILALLLELYHFAELKLNLKFEIEVLCKDLELDHKTIEPSVVIR
DRSAHIEDALSTANIPEGLEAFEDMALTTINQGMRTERLSPAAIMSTLPSLDKILVLPSS
ASSMIDPNVLRQIVHTAVERAIAEIITPVVERSVTIASISTVQLVSKDFAMEPDEEKVRH
AAANMVRQLAGSLALVTCKEPLKVSMTNYIRMIQQEYSEQPMPEGLILMCVNDNLDAACG
IVEKAAEEKSLPEIEKVIEPQLEARRRHRAARPNEPFIDPSMNRWGLFIPEPYRQAPGGL
NKEQLAIYEEFARQARGPAATHVQNVSTDSGRQLADVLQDSYAQIPNLSTPAEQPAVPHR
TPQAQQDTRLQQTGLVGAQPQLNGFLEAPTPRDKVDSIVSDLQQAARNAPEERVKDLGRD
SAVLQEYNQALRTILTSPSGEELARLTSLKICTTLYSQTPSNLEIEVLVHLLAKLCDMSS
LVARYTWVVLSEVDDEHIFNVPVTVALIDAGLLDIRRVDMSLTRLICQKNTGALEILANL
MDRVLFNEEPSALRSDFSGSLEAMSQWLAEDANLAPANEIIRKLRESGIPEVVNPLLSDK
ARAKRDQMEYIFSEWIGIYKAPGATDRTYYSFLKDLHQRQVMDNQEDSALFFRLSIDISV
AMFEHESQNPNGSLDEAFLYIDALAKLVILLVKFQGESTGSSKASKSVYFNSILSMLVLV
LNHHHVIRGEAFNQRVFFRLFSSILCEYSLSGLQQSDQHQEMMFALANKFLSLQPQYCPG
FVYGWLSLVSHRFFMSGMLNMPERAGWGPYCEIMQALLSYIGEQLKPANISYVAKDLYKG
VLRILLILHHDFPEFVAENHFQFCNVIPAHCAQLRNLVLSAYPSSFHKLPDPFREGLKVE
RLEEMREAPKIAGDIAAPLQRANIKGIVDSLLQSNNQAEASIQKICDAIYNPVNKDTGLF
YTPINVNVILMNALVLYIGQDAVSTGGSKGNTRAVFDSSPHSALLESLAKVLRPEARYYL
LSAMANQLRYPNSHTYFFSFAILRLFGVDNSEQDGSDIRQQIIRVLLERLIVHRPHPWGL
IITLQELLQNRSYTFFHLPFIQAAPEIGRLFDALLQHIQQQSPRAMP
NT seq
6984 nt
NT seq
+upstream
nt +downstream
nt
atgaccttccctccccctcccccttcctcccaatcgtcgattgcttctggcaccgataaa
ttgtcttcgaacagggcggcgaggtcacagcaatctgcttggggtctctccgcatcccag
tctagcattcgccgtgggttgactccgcttgcgactaacaacctttcatcgtcatcgatt
ccgtctgcgaattcccgaggaccagttcagtcaactagtcccgctccaggtggttcaacc
tcttcccctttgacttcttccttctccgccgttctgagctccgcaaggggtcttcctggt
ggacggagcgtaccctcgcctgcctcaacaccgtcaccttttaccaccttccaatctggc
tcgcaacagcatcagcaatccggacagtctctctcgtctcctaaatttagggctcacacc
ccttcgtcacatctggcttccgcagcaggctctatcgcgggtggtggaggctccggggga
ggcggtggtgggacgggatcttccagaggcgccaccttctctccgttattgtccggcaac
accgtgaattcacccacagggtttccctccgacaaaccgggctcagcagcttctggagct
gcagctcacgcaggccagtcctcgttaactaaaatatccattgctcaagtcttccttctt
ctagactctatcacggagaaagaaggtcgagagaagtgggagaccaaagccgctcagata
cacaagcttgttgagtcgaacggaatggaggtcttctcgaagtatttccggcgtcttctg
acgggcaatgcccctcaaatctttccaggggtcaacaagtctgtggaaaatgctggcaat
taccccttgttggtccaagaaatgcagaaagtcactcaggacatagagcaagcccagaaa
atcgcagaaacggttgatacctcagaaggagacatattccgtgatttcgatctttctacc
ttcctcgatcattttaagctggatcctgtcgctaaggtagcccttgcactggccttcaaa
accgccaataagtcggatctgcgtgcgaaagccgatgcaattctttcgaactctgtcacc
ccttttcttcaaagtttggcgacaccgtctgaggcatccaaggacttcaaaaactcgttc
attgggatgaccattgagcgccaaattagtgtacgcagcgaatctgcgctaccagaaatt
aggcgtggagatgccattcgaggttgcttctgcgctacaaatgttcaatttctgaatcca
agatacacattggtccgtcagctccattctagaggaccccgagccacatcgaacgtcgac
gccgtgaatgaagcagtcaattcagccgggcctgatgcctggaacgaagagcatattgcc
agcgcccttctgtttctggttctttctcagtattggcaggacttctccttggagactttc
ctccgagcggtcaagtcacattacgttgacaggcagattaattggtctttcattttccga
aactttgatcgagagggcctgcgacttgatccgaagcagtttgccaaactgtattcagtc
ctcttgtcggcggctgcggatgattccaccttggacatccagaagctttggggtggcgat
tgggaacatcgggacacacaaatgtctttcttgacggctctcattgtttcccgaacggat
gtctctcagattcccaatcttcgagctaccttcccagcggatttcttcgctgacggtccc
gagctcgttcgcttgcaaggggagcgggcaacgaagtctccgcttcgttctttggacgct
atgaaagccatctttgacattgcgttgttctctcaggctgcatgggcagctgcggaaagt
caactactcatcaaggctgttgtccagtatgatcttcctgtctttttgtgctcagctctg
gctcttcctcagccgtggaccagcgttcaacaaagcttcgttcttcggacgctcgttgtc
tttatcttaaaacaagaagagggataccagcttgcgcttcatggagcttggcgtcaggat
cgccaatgggtagctgagcagcttttcaccacgttcacccaagacccaacctcaacagcc
gcaatctacgagcatgctgtcgagtttgactggctggactacctgcttgggtacacaaac
ggtcttgctatggatctggcttgctatgctcatcgaaagggaccctttgacctcgagcaa
tgggttcgcaatgcagctcagaaaggtccaatggatatgggtaatctgttgtctaaatac
ctcaggatcaaggcagaagatgaattgcacgtccagaggaaggaacaacctgctccgcaa
atggtcagtctttcagtgaagactgtctatactctgctgtctgttttggaggaatatgtt
ggcgaccgtgaaaatctcacgccggtgcagcgaatatgcattcagacctaccctcggctt
atcaattacggggaaggttttgatgatattatcgacgcgaatggcgaaaacggcaatgcg
ttacctgaaactattgacaaacagatgcaggagcttttcggcaagatgtatcacgaagaa
ctttcgttgcgggaaattttggagttaatgcgacggtacaaaacatctcgtgatccggct
gaacaagatcttttcgcgtgcatggttcatggactcatcgatgagtaccattgctaccat
gaatatcccttggaagcgctcacaaagacagctgtgatgttcggtggtatcatcaacttc
cggctcgtcgacggaatcacgctgaaagtggggctgggcatgattctcgaggctgtgcga
gaacatgacattcacgatcccatgtacaagttcggcgtcgaggccattgagcagctgatc
agtcggctccccgaatgggctggcttttgtcacctcctgcttcaaattccgaccttgcag
ggcacgcccattttccagaaggctgaagaagtcctacgcgagcagggaagtcaggtgcga
gactctgatcctggtagactagagaatgccactggcgcgtccataacgaacggtaccctc
gatgagagcgcaccagacggacccacacgcaagttcctgtctatccatgtcgacccacct
ttacgacctgagatttaccatgatccagacgaggaggtgcaggacaagatcctattcgtc
ctaaacaacgtgtcggagcaaaatattgaggagaagctgcacgatctcactgacgttctg
cgagaccagcatcatcagtggttcgcatcatacttggtggaagaacgagcgaaattacag
ccaaattttcagcaactctatctcgatcttcttgaccgcattaacgacaagattctatgg
gctgaagttctgagagaaacatactcgagcgtgtgcaagctgttgaatgcagaggggacg
attaactcgtccacagatcgcggccatctcaaaaatctcggttcatggctcggttcactg
actatagcaaaagacaagcctataaagcacaaggatatatacttcaagggtcttctcttg
gaaggctatgacagtcagcgtctgaccatcgtgatcccattcacttgcaaagtgctggtc
caggcgacaaaatccactgtcttcaagccgccaaacccatggttgatggatattctcgct
cttctgctggaactgtaccactttgccgaactgaagttgaatctcaaatttgagattgaa
gtactgtgcaaagatctcgaactggatcataagacaatcgaaccctccgtcgttattcga
gatcgctcggctcatatcgaggatgcgctgtcgacagcaaatatacccgaaggcctcgaa
gccttcgaagacatggctctcaccaccatcaatcagggaatgcggacagagaggttgtct
cccgccgcgatcatgtccactcttccaagcttagacaagatccttgttttaccatcttcc
gcgagcagcatgattgacccgaacgtcctccggcaaattgtccacacagctgtcgaacgc
gccatcgcggagataatcaccccagttgtagaacgctccgtcacgattgcatcaatttca
actgtgcaacttgtatccaaggactttgccatggagcctgacgaggaaaaggtgcgacat
gccgctgccaatatggtgcgacagcttgccggcagcctggccctggtgacttgcaaggag
cccttgaaggttagcatgacaaactatatcagaatgattcagcaagagtactccgagcag
cccatgcccgaaggtttgattttaatgtgtgtcaatgacaaccttgatgccgcctgcgga
atagtcgagaaggcggcggaggagaagtctctccctgagattgaaaaggttattgaacca
caattggaagcgcgccggcgtcatcgggctgcccgacctaatgaacctttcatcgacccg
tcgatgaatcgttggggcttgttcattcctgaaccctaccgacaagccccaggtggtctg
aataaagagcagttggccatttatgaggagtttgctcgtcaagctcgtggtccagcagca
actcacgttcagaacgtatcgactgattctggtcgacaactggcagatgttctccaggat
tcgtatgcgcagattcctaacctctctacgcctgcggaacagccagctgtacctcataga
actccacaggctcagcaagacacgcgtttgcagcaaaccggtctcgttggcgcacaaccg
caactaaatggctttctggaggcgccaacgcctcgtgacaaagtcgacagcatcgtttct
gatctacagcaagcggctcgcaatgcacccgaggagcgcgtgaaggatcttggcagagat
agtgctgtattacaggagtacaaccaggctttgcgcactatccttacgtctccaagcggt
gaagagctggcaagattgacatctctgaagatctgcacgaccttgtattcccagacaccg
agtaatcttgagatcgaggtacttgtgcatttgcttgcgaagttgtgcgatatgtcctca
ctcgtcgcaagatatacctgggttgtcttgtcagaagtagatgacgagcatatattcaat
gtcccagtcacagtggcactcatagacgctggactgctggacattcgccgcgttgatatg
agtctcactagacttatctgccagaagaacacgggtgctctcgaaatactggccaatctg
atggaccgagtgctgttcaacgaagagccttccgcattacggtctgacttctctggcagt
ctcgaagcaatgagccaatggcttgcagaagacgcaaatcttgctcctgcaaatgaaatt
atccgcaaacttcgcgagtccggtattcctgaagtcgtcaaccctctactcagcgacaaa
gcgcgagcaaagcgggatcagatggagtacattttcagcgagtggattggtatttacaag
gctcccggcgccaccgaccgtacctattattccttccttaaggacctgcaccagaggcaa
gtcatggataatcaagaggactctgctttattcttccggctcagcattgacatctccgtc
gcgatgttcgagcatgaatcacagaatcctaacggtagcctcgatgaggctttcctctat
atcgatgcgcttgcgaaattggtcattctgctagttaaattccaaggagagagtaccggc
tcgtccaaggccagcaaatctgtctacttcaactcgattctgtcgatgctcgtgctggtg
ttgaatcatcaccacgttatccgcggagaggctttcaaccagcgcgtatttttcagactc
ttctcaagtatcctctgcgagtattccctgagcggacttcagcagagtgatcagcatcag
gaaatgatgtttgctcttgccaacaagttcctatcgctccagcctcagtactgtcccggt
ttcgtctacggctggctctcactggtgtctcacagatttttcatgtcaggaatgctgaat
atgcctgagcgtgctggttggggtccctactgcgaaataatgcaggctctcctctcttac
atcggagagcagctcaagccagcaaacatctcttatgttgccaaagacctctacaaagga
gtgcttcgtattctgctgatcttgcaccatgacttcccagagtttgttgcagaaaatcat
tttcagttctgcaatgtcattcccgcccattgcgctcagcttcgtaatcttgttctgagc
gcatacccgtcatctttccacaagcttccagatccttttagagaaggtctgaaagtcgag
cgcctggaagagatgcgcgaagctcccaagattgccggcgacatcgctgcacctctacag
cgcgccaacatcaaaggtattgtcgatagcttgctgcagagcaataaccaggcagaggcg
tccatccagaagatttgcgatgctatctacaaccctgtgaacaaggatactggactcttc
tacactcccatcaatgtcaacgtcatcctgatgaacgcgttggttttatacattggtcag
gatgcggtttctaccggtggttccaaaggcaacactcgcgccgtgttcgacagctcgccc
cattcggcacttctggagagcctcgccaaggtgctacgacctgaggcgcgctactacctg
ctcagtgcgatggcgaaccaattacgctatcctaatagccatacctacttcttcagcttt
gccattcttcgtctctttggcgtggacaactccgagcaggatggatccgatatccgtcag
cagattatccgagtcttgttggagcggctgatcgtccatcgcccccacccctggggtttg
atcatcaccctccaggagttgctccagaaccgaagctacactttcttccaccttcctttc
atccaggctgcgcctgagattggtcgtctcttcgatgctcttctccaacacatccagcaa
caaagccctagggcaatgccttag
DBGET
integrated database retrieval system
