Artemia franciscana: 136028832
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Entry
136028832 CDS
T10524
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
afra Artemia franciscana
Pathway
afra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136028832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afra03019
]
136028832
Messenger RNA biogenesis [BR:
afra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
136028832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
136028832
NCBI-ProteinID:
XP_065562834
LinkDB
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Position
7:complement(9994091..10024177)
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AA seq
213 aa
AA seq
DB search
MEEISFLRPLSCDLACLKNSHGSAILAQGKTVIGASINGPVEARQQREEIENAYIEMAYR
PASGLPELIDRRRENLIVRICEKALILGHHPRTAIIITVQELQNDGGLTAAAVNATCLAL
LNSGLDMNYLFAAVCCGIDSRTEQLIVDPNRSQLQFCRAAFTFVFESQNSRNISVETEGS
FSDDELQKALNACQEASSEVIEFYRDLLKKISV
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaataagttttctgaggccactatcatgtgatcttgcatgtctgaaaaactct
catggttctgcaattttggcacaaggaaaaactgtaattggtgcatctatcaatggacca
gttgaagcccgccaacaaagagaagaaatagaaaacgcttatattgagatggcgtacaga
cctgcttctggtctacctgagctgatagatagacgaagagagaacttgatagtgcgaatt
tgtgagaaagcactaatattaggccatcatccaaggacagctataataatcacagttcaa
gaattgcagaatgacggtgggcttacagctgccgctgtaaatgccacatgccttgcactt
ttaaattctggcctggacatgaattatctctttgctgcagtttgttgtggaatagattca
cgaaccgaacaactaattgttgatccaaatagatcccagctacagttttgtcgtgcagct
tttacatttgtttttgaaagccaaaattctcgtaatatttcagttgagactgagggcagt
ttctcagatgatgaattacaaaaggccctgaatgcctgccaagaagctagcagtgaagtg
atcgagttttatagagatttgttaaaaaaaattagtgtctag
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