Artemia franciscana: 136034616
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Entry
136034616 CDS
T10524
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
afra Artemia franciscana
Pathway
afra03040
Spliceosome
afra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136034616
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136034616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afra03041
]
136034616
04121 Ubiquitin system [BR:
afra04121
]
136034616
03400 DNA repair and recombination proteins [BR:
afra03400
]
136034616
Enzymes [BR:
afra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136034616
Spliceosome [BR:
afra03041
]
Complex B
Other components
Prp19 complex
136034616
Complex C
Prp19-CDC5 complex
136034616
Ubiquitin system [BR:
afra04121
]
Ubiquitin ligases (E3)
U-box type E3
136034616
DNA repair and recombination proteins [BR:
afra03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
136034616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WDR55
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR19_1st
eIF2A
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_Nup120_160
U-box
Beta-prop_DCAF12
Ge1_WD40
Tricorn_2nd
ATG16
Cytochrom_D1
WD40_like
RMC1_N
Beta-prop_ACSF4
B-prop_COPA_B_2nd
Beta-prop_VPS8
PROPPIN
Motif
Other DBs
NCBI-GeneID:
136034616
NCBI-ProteinID:
XP_065571972
LinkDB
All DBs
Position
13:19199671..19248872
Genome browser
AA seq
502 aa
AA seq
DB search
MALICGICNEVPEHPVVSPVSGIVFERRLIEKYINENGKDPINGKDLDVEQLVDIKAPPT
AKPKAPSATSVPALLKSLQDEWDAVMLNSFTLRQQLQTARQELSHALYQHDAGCRVIARL
TKEVGSLREAVATLKPHAQVPAVPQPTVADVAEVGVPAVAPTETAGMTPEIIAKLQDRAT
VLTQERKKRGKTVPEGLISAETIRDFRTIASHPSLHSASIPGILAIDLHAADTSKVVTGG
ADKNATVFNKDTEQVVAILKGHSKKVNHVIYHPSEDIVVTSSPDTTVRVWNVSNSQCSQI
IRAHADAVTGLSLHATGDYVLSTGTDEHWAFSDIRTGRVLSKVSDGGGVALTVAQFHPDG
LIFATGTADAQIKIWDLKEQTNVANFTGHMGQVSAISFSENGYYLATAADDASVKIWDLR
KLKNFKTIQLEGSYEVKDLCFDQSGTYLAVAGSDVRVYVCKLWNDVFVSNDHTATVTGVR
FGHNAKFLASVSMDRTLKLYGP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggctttaatttgtggaatttgtaatgaagtccctgagcatccagttgtgtctccagta
tctggaattgtttttgaaagacgactcattgaaaaatatattaatgaaaatggaaaggat
ccaataaatgggaaggaccttgatgttgaacagttggtagatataaaagcgccacctacc
gctaagccaaaagcgccatctgccacaagtgtcccggctcttttgaaatcattgcaagat
gaatgggatgctgtaatgctcaactccttcactcttcgtcagcaactgcaaactgcacgc
caagaattaagccatgctttgtatcagcatgatgctggctgtagagtgattgctcgacta
acaaaagaagttggctcccttcgtgaggctgtggctacactcaaaccacatgctcaagtt
ccagctgtccctcaacctaccgtcgctgatgttgctgaagttggagtaccggcagtagcc
cccaccgagacggctggaatgactccagaaattattgccaaacttcaagacagggcaacg
gtgcttactcaagaacgaaaaaaaagaggaaagactgtaccggaaggtctaatctcagct
gagactattagagattttaggaccattgcatcgcacccgagtctacacagtgctagtatt
ccgggtattttggcaatagatttgcatgctgctgatacatccaaagttgtaactggtggc
gctgacaagaatgccaccgtttttaacaaagatactgagcaagttgtggcaattctaaag
ggacactccaagaaggtcaaccatgtcatctatcatccaagtgaggatatcgttgtgacc
tcaagtccagatacaactgtccgtgtttggaatgtaagtaattcacaatgctctcaaatc
attcgtgctcatgcagacgctgttacaggactgtctctccacgccacaggagactatgtg
ctttcaactggaactgatgaacattgggccttctctgacatccgaactgggcgtgttttg
tcaaaagtatctgatggtggtggtgtggcccttactgtggcacagtttcatcctgatggc
ctgatttttgcaactggtactgctgacgcacaaataaagatttgggatttgaaagaacag
accaacgttgctaacttcactggtcatatgggacaagtatcggccatttccttctctgag
aacggttattaccttgcaactgctgctgatgacgccagtgtcaaaatatgggatttgaga
aagttgaagaatttcaaaaccattcaattggaaggcagctatgaagtcaaagatctgtgc
ttcgaccaaagtggtacctatttagctgttgctggaagtgatgtcagggtttatgtttgt
aagctgtggaatgatgtttttgtgtcaaatgaccatacagccacagtgactggtgttcgc
tttgggcataatgccaagtttttggcatccgtctccatggatagaaccctgaagctatat
ggaccataa
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integrated database retrieval system
