Allofrancisella frigidaquae: E3E15_00055
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Entry
E3E15_00055 CDS
T06608
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
afri
Allofrancisella frigidaquae
Brite
KEGG Orthology (KO) [BR:
afri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afri03016
]
E3E15_00055
Enzymes [BR:
afri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
E3E15_00055
Transfer RNA biogenesis [BR:
afri03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E3E15_00055
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QIV93838
UniProt:
A0A6M3HRJ4
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Position
16336..18192
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AA seq
618 aa
AA seq
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MQKNSLVIFKSKPAKIIDVLDKKIEIETIDGKKIKLPPKNVQFLIDTQSDFELAELKQLQ
IDDLELTWELLQEQTETSIEELSELLFETTGVKQAYTIWLLVSEGEFFSFNEDFSVNIHS
PTQKETIIREKQEKHKKEQELNNFIARLNNKTYLQEDEKFLKEIEALALLKSPNCRFFKY
LNIEESESSAYKLLLDIGYWDEHINPYLYRYKAELENNPAKFEYNSSSDIGRVDLTYLKA
YAIDDEDSNDPDDAISWDTKNSKIWVHVADPSSSIAFGEQIDLEARARGSNLYTPEKIIS
MLPTEATEVLGLGLQEISPALSIGFSITTNGDIGDIQICFSKVKVIRLSYEFAEENISYL
ELGDITKFARRFTEKRLQAGGVELNFPEAKIKIEADKRVSIYDLHTLESRILVRDTMLMA
GVAVGKFCLEHNIAVPFSTQPQHELTKEELESLITPAHMFAARKKLQRGKYATQADKHAG
MGLENYVQVTSPLRRYLDLLVHYQIRRFLGHQELLSIDTVNEIIAQVDTPIRINRQTERD
SNLHWKLVYLIQNPNMKFKATVVELLERNKVLVSIEKLAMTKKISVNSKLDLNSTLVLEN
SSVNLVNQEAYFKVLENS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaatagcttagttatctttaagtctaaaccagctaagattatagacgtttta
gataaaaagatagaaatagaaaccatagatggcaaaaaaataaaattaccacctaaaaat
gtccaattcttaatagatacacagagcgactttgagttagcagagttaaaacaactacaa
attgatgatcttgagttaacttgggagcttttgcaagagcaaacagaaacttcaatagag
gagttaagcgagctgctgtttgaaactacaggagttaagcaagcatatacgatttggctt
ttagtgtcagaaggagagtttttcagttttaacgaagattttagtgtaaacatacattcg
cctacgcaaaaagaaacaataattcgagaaaagcaagaaaaacacaaaaaagaacaagag
cttaataactttatagcacgcctaaacaataaaacatatttacaagaagatgaaaaattc
ctaaaagagatagaagctttagcgttattaaaaagcccaaactgtagattttttaagtac
cttaatatagaagaatcagaaagtagtgcttataaactacttttagatataggttattgg
gatgagcatattaatccatatttatacaggtataaagcagagctagagaataacccagca
aagtttgagtataactctagttcggatattggtagagtagacttaacttacctaaaagct
tatgcaatagatgatgaagatagtaatgaccctgatgatgctataagctgggacactaaa
aatagtaaaatatgggtacatgttgctgatccatcttcaagtattgcttttggtgagcaa
atagatctagaagctagagctagaggttcaaatttgtatactcctgagaaaattatttcg
atgcttccaactgaagctacggaagttttaggattaggactacaagaaatatctccagct
ttatctattggctttagtatcactactaatggtgatataggtgatatacaaatatgcttt
agtaaagttaaagtaattaggttaagttatgagtttgcagaagaaaacataagttacctt
gagcttggtgatattacaaagtttgcaagaagatttacagaaaaacgtttacaagcagga
ggagttgagcttaatttccccgaggctaaaattaagatagaagctgataaaagagttagt
atatatgacttacacacgctagaatcgcgaattttagtaagagatacaatgcttatggca
ggtgtcgctgtaggtaaattttgtctagagcataatatagcagttcctttttctacacag
ccacagcatgaacttactaaagaagagttagaatctctcataacgccagcgcatatgttc
gctgcgaggaaaaagttacaaagagggaaatacgctacacaagctgataagcatgctggt
atgggtttagaaaactatgtacaagtaactagtcctttaagaagatatcttgatttgcta
gttcactatcagattagacgttttttaggtcatcaagaattattaagtattgatactgta
aatgaaattattgcacaagtagatactccaataagaataaacaggcaaactgaaagagat
tcaaatttacattggaagctagtatatctaatacaaaaccctaatatgaaattcaaagct
acagttgtagagttactagaaagaaacaaagtattagtatctatagagaaattagctatg
acaaagaagatatctgtcaatagtaaactagatctaaatagcactttagttttagaaaat
agctcagtaaaccttgtaaatcaggaagcttattttaaggttctagaaaatagttaa
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