Aythya fuligula (tufted duck): 116490806
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Entry
116490806 CDS
T07966
Symbol
SCN2A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aful04040
]
116490806 (SCN2A)
Ion channels [BR:
aful04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116490806 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
116490806
NCBI-ProteinID:
XP_032046211
UniProt:
A0A6J3D495
LinkDB
All DBs
Position
6:complement(20602787..20680571)
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AA seq
2018 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRINEEKAKKSKQERKDDDEEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISYFNSSI
GENGTFINTTMTTFNWDEYIEDRNHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDEEEFRKSESEDSIKRKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPPLPVNGKMHSTVDCNGVVSXVGG
PPALTSPTGQLLPEVMIDKAATASNGTTTETDLRKRRSSSYHVPMDYLTDPSARQRAMSI
ASMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITI
CIVLNTLFMAMEHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFD
GFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAV
ARIQKGIDYVKRKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSCISNHTIVEIGKNLAY
LKEGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESD
LEESKEKLNASSSSEGSTVDIGLPPEGEQPEVEPEEALEPEACFTEGCVRRFKCCQVSVE
DGKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYHNSVKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCV
NTTTDERFDISQINNYSQCEELIKNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVT
MMVETDDQSEDMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIV
GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSG
EPDCDPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESA
EPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMV
SGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEV
SAVVIQRAFRRHLLRQKVKKVSCIFNQDKGKDEDDLPTKEDMIMDKLNENSTPEKTDMTP
STTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagcttccgctatttcacaagagaa
tcacttgcagcgattgaacagcgtatcaatgaagaaaaagctaagaaatccaaacaagaa
cgcaaagatgatgatgaagaagatggcccaaagccaaacagtgacttggaagcaggaaaa
acactgccatttatttatggtgacatacctccaggaatggtgtccgagcccttggaagac
ctggacccatattatatcaataaaaaaacctttatagtattgaataaagggaaggcaata
ttccgattcagtgccacctctgccctatacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcgttattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgc
ttagaagattttacatttcttcgagacccgtggaattggctagatttcactgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcttgaagactatcgtgggagcc
ctaattcagtctgtgaagaagctctcagatgttatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattctacttttgaaacaactgttatttcctactttaatagctctata
ggtgaaaatggcacatttattaatacaacaatgacaacatttaactgggatgagtacatc
gaagatagaaatcatttctatttcttggaaggacaaaatgatgctctgctgtgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactgcgtgctgctgggaaaaca
tatatgatcttttttgttttggtcatttttctgggctctttctacctgattaacttgatc
ctggctgtggttgccatggcctatgaagaacagaatcaagcaaccatggaagaagcagaa
cagaaagaagcagaatttcagcaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcagcagcagcagctgcagcagctgactcaagagattatagtggagtaggtggaata
ggtggattctctgaaagttcttctgaggcatcaaaactgagctcaaagagtgctaaagag
aggaggaatagaagaaagaaaaaaaagcaaaaagaacagtctgaaggcgaggaaaaggat
gaggaagaatttcgcaaatccgaatcagaggacagcatcaaaaggaaaggcttccgattt
tccattgaggggaatagactgacatatgaaaaaagattctcttccccacaccagtctttg
ctgagcattcgcggctccctgttttccccaaggcgcaatagcagaacaagtcttttcagc
ttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgctgatgatgagcacagc
acttttgaagacaatgagagcagaagagattctctctttgttcctcatagacatggtgaa
cggcgcaacagtaacattagtcaggccagtaggtcatccaggacagtacctccgcttcca
gtgaacgggaagatgcacagcactgtggattgcaatggagtagtttcttaggtcggtggg
cctccagctctgacatcacctactggacagcttctgccagaggtgatgattgataaagca
gccactgctagcaatggcactactacagaaactgacttaagaaagagacggtctagttct
taccatgttcctatggactacctaacagatcctagtgcaaggcaaagagcaatgagtata
gccagcatgcttacaaatacaatggaagaacttgaagaatcaagacagaaatgcccacca
tgctggtacaaatttgctaacacttgcttgatttgggactgttgcactccctggctgaaa
gtcaaacatattgtaaatttgattgtgatggacccatttgttgatctggccattactatc
tgcattgttcttaataccctgttcatggccatggaacactatccaatgacagaacagttc
agtggtgtgctttcagtaggaaaccttgtgtttactggaattttcacagcagaaatgttt
ctcaagataattgccatggatccttactattatttccaagagggctggaatatttttgat
ggttttattgtgagtcttagtttaatggagcttggccttgcaaatgtagaaggattatct
gtccttcgatcattccgattgcttcgagttttcaagttggcaaaatcttggccaactcta
aatatgctcattaagattattggcaactcagtgggggctttggggaacttgacccttgtg
ctggccatcattgtgttcattttcgctgtggttggaatgcagctgtttgggaaaagctac
aaggaatgtgtctgcaagatctccagtgattgtgaacttccacgctggcacatgcatgac
tttttccactctttcttgattgtgttccgagtgctgtgtggagaatggatagaaacaatg
tgggactgcatggaggttgcaggccaaactatgtgccttactgtctttatgatggtcatg
gtgattggaaacctagtggtactcaacctctttctggccttgctgctgagctcctttagt
tcagacaaccttgctgctacagatgatgataatgaaatgaacaatctacagattgctgtg
gcaaggattcagaagggcatagactatgtgaagagaaaagtgcgtgaattcatccaaaaa
gcctttgttagaaagcaaaaagttttagatgaaatcaaacctcttgaagacctaaacaac
aaaaaagacagctgtatttccaatcacacgatagtagaaataggtaaaaaccttgcctat
cttaaagaagggaatggaactacgagtggcataggcagcagcgtggaaaaatatgttgtt
gatgaaagcgattacatgtcattcataaacaacccaagtctcactgtgacagtgccaatt
gctgtcggcgaatctgattttgaaaacttaaatacagaagagtttagcagcgagtcagac
ctggaagaaagcaaagagaaattaaatgcgtctagttcatcagaaggcagcacagttgat
attggactacctccagaaggagagcagccagaagtagaacctgaagaagctctggagcca
gaggcttgtttcacagaaggctgtgtgcggagattcaagtgctgtcaagtcagtgtagaa
gatgggaaagggaaaatctggtggaatctgaggaaaacctgctataagatagttgaacac
aactggtttgagaccttcattgtcttcatgattcttctcagcagtggtgctctggcattt
gaagatatataccataacagcgtaaaaactatcaagaccatgctggaatatgctgacaaa
gtttttacttacatcttcattctggaaatgcttttaaaatgggtggcttatggctttcaa
acctatttcactaatgcatggtgctggttggacttcctgattgttgatgtctctttggtt
agcttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggaca
ctaagagctttgagacctctaagagccttgtcgcgatttgaagggatgagggtggttgtg
aatgccctcttaggagccattccatccattatgaatgtgcttcttgtttgccttatattc
tggctgatattcagtatcatgggagtaaatctatttgctggaaaattttattactgtgtt
aacactacaactgatgagagatttgatatcagccaaatcaacaattacagccaatgtgaa
gaactcataaaaaacaatgaaactgccagatggaaaaatgtgaaggttaactttgataat
gtaggccttggttatctttctctgcttcaagtggctacatttaaaggatggatggatatc
atgtatgcagctgtggattctcgcaatgttttggatcagcctaaatatgaagataacctg
tacatgtatctttactttgtcatctttatcatctttggatcattctttaccttgaacctt
ttcattggtgtcatcatagacaatttcaaccagcagaaaaagaagtttggaggtcaagat
atttttatgacagaagaacagaagaaatactacaatgcaatgaaaaagttgggttcaaag
aaaccacaaaagcctataccacgaccagcaaacaaattccaaggcatggtatttgatttt
gtaacaaaacaagcatttgatatcagtatcatgatacttatctgccttaacatggtcaca
atgatggtagaaacagatgatcaaagtgaagacatggaaaacattttatattggattaac
ctggtgtttattgtactgttcactggagaatgtgtactgaaattgatttcacttcgccat
tactactttactataggctggaatatttttgatttcgtggttgtcattctctccatagta
ggtatgttcttagctgagatgattgagaaatattttgtgtcccccactttgttccgagtc
atccgacttgccagaataggtcgaatcctgcgtctcattaaaggtgctaagggaatccgc
actctgctctttgctttgatgatgtctcttcctgctttgttcaacattggcctgctgctg
ttcctggtcatgtttatctatgcgatatttggcatgtccaactttgcctatgttaagagg
gaagttgggattgatgacatgttcaactttgaaacatttggcaacagcatgatctgccta
tttcaaatcaccacatctgctggctgggatggtttgttagccccaattctgaacagtggg
gagccggactgtgaccctcacaaagatcatccggggagctctgttaaaggagactgcggc
aacccttccgttgggattttcttctttgtcagctacatcatcatatcctttctggtagtg
gtgaacatgtacattgctgtgattctggagaacttcagtgttgctactgaggaaagtgct
gagcctctgagtgaggatgactttgagatgttctatgaagtctgggagaagtttgatcca
gatgcaacacaattcatagagttcagtaaactatcagattttgcagcttcattagatcct
cctcttctcatagcaaaaccaaacaaagtccagcttattgcaatggatctgcccatggta
agcggtgacagaattcactgccttgacatcttgtttgctttcacaaagcgtgtcctgggg
gaaagtggggagatggatgccctcagaattcagatggaagatcgttttatggcagccaat
ccttctaaagtctcctatgaaccaatcacaaccacattaaagcggaaacaggaggaggta
tctgctgtcgttattcaacgtgcttttaggcgtcaccttttaaggcaaaaagtcaaaaaa
gtttcatgtatatttaatcaggataaaggtaaagatgaggatgatctgcccacaaaagaa
gatatgattatggataaactaaatgagaactccactccagagaaaacagatatgacccca
tccacaacctccccaccatcctatgacagtgtaacaaagccagacaaggataaatatgaa
aaagacaaatcagaaaaagaagataaaggtaaagacagcagggaaagtaaaaagtaa
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