Aythya fuligula (tufted duck): 116493209
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Entry
116493209 CDS
T07966
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116493209 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aful03400
]
116493209 (XPC)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
116493209 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
116493209
NCBI-ProteinID:
XP_032050288
UniProt:
A0A6J3DLP5
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Position
10:complement(11904906..11916386)
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AA seq
964 aa
AA seq
DB search
MARKRKASIPAATASKKRPGGPRDEVKKEKEEEEEEADDFEEKKPSIKKSKPKVPATKKK
EDSDPGVSKSANKPSKQKGVKLLAKENKKITENKGNHSKEQTCSDSLKPPQKETKLKRES
SVKKEMDEDNTDDDDESEDEWEDVEELQEPVTDKLEEAAVHSSVALPSNPVEIEIETPEQ
RKKRERREKRKSEFETYLRRMMKRFSKEVREDTHKVHLLCLLANGFYRNRICSQPDLHAI
GLSIIPTHFTKVSAGQVDILYLSNFVKWFIGTFTVNDELSIEKGEPLQSTLERRFAIYAA
RDDEELVHIFLIILRALQLLCRLVLSLQPVPLKETTAKGKGSSKRQSLSSTSEGRESSGT
TPKAVAKKCPCKKAKKDEKSSGSEEDNKEPEKPRTARTKRTHKSKLTSGSQEQKEIGNEE
SGLGEKDVPVKPKNDRRRRVASKVCYKEESGSDEGSVSDFEVSEEESDLSDEDFVTVSKK
QRRSLGSQKSKLTSIKSPKTETSESKQSKNCSGVEPRPAKSMAPALPHASRKRNKIISSD
EDDGQQLVRKVVGTDQWLEVYLERENKWVCVDCVHGSVGQPQQCFRYSTKPLYYVVGFDN
DGSVKDVTQRYDPVWMTTTRKNRVDPEWWEDTLQPYRSPFVERDEKEEKEFQVKLQDQPL
PTAIGEYKNHPLYALKRHLLKYQAIYPESAAILGYCRGEAVYSRDCVHTLHSKDTWLKQA
RVVRIGEVPYKMVKGYSNQARKARLAEPANRDKEDLALFGRWQTEEYQPPIAVDGKVPRN
EYGNVYLFLPSMLPVGCVQLRLPNLNRLARKLDIDCAQAITGFDFHGGYSHPVTDGYVVC
EEYKEVLIAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYSIKTESSAP
ETEKGAGFSSDEEGGPSSGTAGRDVAISWPQNRQVEKQKEEQTTKKSKREKKGEAAQLFP
FEKL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaaacgcaaagcctccatcccagcggcgaccgccagcaagaaacgccccggg
gggccgcgggatgaggtgaagaaggagaaggaagaggaggaggaggaggcagatgatttt
gaagagaagaagcccagtataaagaagagcaaacccaaagttccagctacgaagaagaaa
gaagactctgatcctggagtttccaagtcagcaaataaaccttcaaaacaaaaaggggta
aaattgctagcaaaagaaaataaaaaaatcacagaaaataaaggaaatcacagtaaagag
caaacctgcagtgattcactgaagccccctcagaaggagacaaagttgaagagagaatct
tctgttaaaaaggagatggatgaagacaatactgatgacgatgatgaaagtgaagatgaa
tgggaggatgtggaagaactccaggaacctgtcacagataagttagaagaagctgctgtt
cattcctcagtggcgctgccaagcaatccggttgagatagagattgaaacgccagaacaa
cgtaagaaaagagagagaagagaaaaaaggaaatctgagtttgagacctatcttcggaga
atgatgaaacgtttcagcaaggaggttcgtgaggacacgcataaggttcacctcttgtgt
ttattagcgaatggtttctataggaacaggatctgcagccagccagatcttcatgccatt
ggtctgtccatcatccccacacacttcacaaaagtgtctgcaggccaagtggacattctc
tacctttccaacttcgtgaaatggtttattggaaccttcactgtcaatgatgagctctcc
attgaaaaaggagagccccttcagtcaaccttggagaggcgctttgccatctatgctgca
cgagacgatgaagagttggttcatatatttttaattattctccgagcattacaactactg
tgtcgccttgtgctgtctcttcagcctgttcctctcaaggagacaacagcaaagggaaaa
ggctcatccaagaggcagtcactcagcagtacctctgaagggcgggaaagctctggcaca
acacccaaagctgtggcaaaaaaatgtccctgcaaaaaagccaagaaggatgagaaatcc
tcagggagtgaagaagacaacaaggagccagagaaacccagaactgctcggaccaaaagg
acacacaagtcgaagctgacttcaggcagccaggagcagaaggaaattggtaatgaggag
agtggtttaggggaaaaagatgtgcccgtcaagcccaagaacgatcgcaggagacgagtg
gcctccaaagtgtgttacaaagaagagagtggaagtgatgagggcagtgtttcagacttt
gaggtttcagaggaggagagtgatctctctgatgaggatttcgtaactgtatctaaaaaa
cagagaaggtcattgggctcccagaaatcaaagctaacgtctatcaaaagccccaaaact
gagacttcagaatcaaagcaatccaaaaattgttctggagttgagcccagaccagccaaa
agcatggctccagcattgcctcatgcatcgagaaagaggaacaaaatcatttctagtgat
gaggatgatgggcagcagctggtaaggaaagtcgttggcacagaccagtggctagaggtt
taccttgagcgtgagaacaagtgggtgtgtgtggactgcgttcatggcagtgttggtcag
ccccagcagtgcttcagatattccacaaagccactttactacgttgtgggatttgacaac
gatgggagcgtcaaggacgtgacacaaagatatgacccagtgtggatgaccacaacgagg
aagaaccgtgtggaccctgagtggtgggaggacacgctgcagccatatagaagtcccttt
gtggaaagagacgagaaggaggaaaaggagtttcaagttaagcttcaagatcaacctcta
ccaacagcaattggagagtacaagaaccaccctctttatgcactaaagaggcatctcttg
aagtatcaggcaatctatcctgagtcagctgctatcctagggtactgcaggggagaggct
gtctactccagagattgtgtacacacgctccactccaaggacacttggctaaagcaggct
cgagtagtgaggattggagaagtaccttacaagatggtgaagggatattccaaccaggca
aggaaggcacgccttgcagagcctgcaaaccgggacaaagaggacctggcactgtttggt
cgctggcaaacagaggagtaccagccacctatagcagtggatggaaaggttcctcggaat
gagtatggaaacgtctatctcttcttgccatccatgttacccgttggctgtgtgcagctc
agactccccaacctgaacagattggcacggaagctggacattgactgtgctcaagcaatc
acaggatttgattttcatggtggctactcgcacccagttactgatggctacgttgtttgt
gaagaatataaagaggtgctcattgctgcctgggagaatgaacaagcagaaatagaaaag
aaggagaaggagaagcgtgagaagagagctctggggaattggaagttgctgacaaaagga
cttcttatcagagagagactgaagcaacgctattccatcaagactgagtcatctgcacct
gagacagagaaaggagctggattctcctctgatgaagaaggaggtccaagttcaggaact
gcaggacgggatgtggcaatttcttggccccaaaatcgccaggtagagaagcagaaggaa
gagcagacaaccaaaaagagcaagcgagaaaaaaagggagaggcagcacagttgtttcct
tttgagaaactgtga
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