Aequoribacter fuscus: EYZ66_05175
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Entry
EYZ66_05175 CDS
T07243
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
afus
Aequoribacter fuscus
Pathway
afus03030
DNA replication
afus03430
Mismatch repair
afus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EYZ66_05175
03430 Mismatch repair
EYZ66_05175
03440 Homologous recombination
EYZ66_05175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afus03032
]
EYZ66_05175
03400 DNA repair and recombination proteins [BR:
afus03400
]
EYZ66_05175
Enzymes [BR:
afus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EYZ66_05175
DNA replication proteins [BR:
afus03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EYZ66_05175
DNA repair and recombination proteins [BR:
afus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EYZ66_05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QHJ87726
UniProt:
F3KYQ8
LinkDB
All DBs
Position
1156842..1160324
Genome browser
AA seq
1160 aa
AA seq
DB search
MTDFVHLRLHTEYSLIDGIVRIKPLMSKVAELGMPAVAVTDFCNFFGLVKAYKAALGAGV
KPIFGADFLISGLAETDRALPLTLLVTSLEGYANLTRLISKAYQEGQRLGVPYIEYEWLT
EFQGGLIALSGGREGQLGQLLLANKQDLALEHASQWMALFPGRFYIEIQRTGRDNEEPYI
HEAVKLASALQCPIVATNDVRFLQADEFEAHEARVCIGEGRTLDDPRRPRNYTDQQYLRS
PQEMAELFQDLPEALANTVEIAKRCNLILNLGTPYLPEYPVPEGMTMDQYFRQLSHEGLA
QRIGGQGERIPDPRFSHQDYIDRLNIELDIIIQMGFPGYFLIVMDFIRWAKEHDIPVGPG
RGSGAGSLVAYVLLITDLDPLQYDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDYVATH
YGRDAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKLIPFEVGMTLAKAVEQEEAL
RDFLRDDSQAQEIWDMACQLEGITRNVGKHAGGVVIAPSKLVDFSPLYCDETGGGLVTQY
DKNDVEDAGLVKFDFLGLRTLTIIAWAIKMINPRRVAHGEQALDINQIPLDDNAVFQLLQ
QADTTAVFQLESRGMKDLIKRLRPDNFEDIIALVALFRPGPLQSGMVDNFINRKHGREAI
AYPDAHYQHESLKPILDPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEMA
KQREVFQSGAAERGIDPELAIRIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKVHYPAE
FMAAVMSSELQNTDKIVIFIEECRAMGLPLKLPDVNEGRYAFTVNDLGEIVYGLGAIKGL
GEGPVEAILRERDANGPFRDLFDFCARTDRRLLNKRAIEALVRAGAFDSLSEPRWVLMAA
VDDAVKAAEQKASNTASGIDDLFGEVMPSAPSADGNVYAAFRSARPWSGRERLSGEKDTL
GLYVTGHPIDDYEREIRQFVPTKIADLRADGKSSQRIVGLIVAVRTMKTKRGDTMAIVTL
DDRSARIEATVYAEAFQASREALTKDTLIVMEGGVAHDDYSGGLSMRANRILSLDEARGA
YASELRITLNGKSDLVLVAQLAQVLNPSVGGACPVVIDYQRHDASSVIVLGEAYRIHPSD
ELLAALGQLPGTVSVKLLYQ
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgactgattttgttcatttacgtttgcacactgagtactccctgattgatgggattgtg
cgaatcaagcctctgatgagcaaggtcgctgagctggggatgccggccgtcgccgtgacg
gatttttgcaatttttttggtctggtcaaggcgtacaaagcggctctgggtgccggagtt
aagccaatttttggtgcagactttttgatatcgggtttagctgaaactgaccgtgccctg
ccgttaaccctgttggtgacgagcctagaaggctacgctaatttgacgcggttaatttct
aaagcgtaccaagaaggtcagcggttgggcgtgccctatatagaatacgagtggctgacc
gaattccaaggagggttaattgcactgtcgggtggtcgagagggccagctgggccagcta
ctgttggcgaacaaacaagatcttgcattagagcacgcgtctcaatggatggctttattc
cccggacggttctacatcgaaatacagcgcaccggacgagataatgaagagccctacatt
catgaagccgtgaagttggcgtcggctcttcagtgtccaattgttgcgacgaacgacgtt
cggtttttacaggctgatgagttcgaggcccacgaggcgcgcgtctgtattggtgaaggg
cgaacgctcgacgatcctcggcggccacgcaattataccgatcagcaatatcttcgaagc
ccacaagaaatggccgagctgtttcaagacttgcctgaggctctcgcaaatacagtagag
attgctaaacgctgcaacctgattctgaatctgggtacgccctatttgcccgaataccct
gtgcccgagggtatgaccatggatcagtattttcggcagctatcgcacgagggcttggct
cagcgtattggtggtcaaggcgagcgcataccggatccgcgttttagccatcaagactac
atcgatcgcctcaatatcgagttagacatcattattcaaatgggctttccgggctacttt
ttgattgtgatggattttattcggtgggctaaagagcatgatatacccgttgggccgggc
cgcggttctggtgcaggctcgctggtcgcctatgtgcttctgattactgatcttgatcct
ttgcagtacgatttgctgttcgagcggtttttgaaccctgagcgggtatccatgcctgac
tttgatgtcgacttttgtatggatcgtcgtgacgaggttatcgactatgtagcgactcat
tatggccgcgatgcggtgtcgcagattattacctttggtacgatggcagcaaaggcggtg
gtcagagatgtcgctcgagtccagggcaagtcttatggtttagccgacaagctatcaaag
ttgatcccttttgaagtgggtatgacgcttgctaaggcggtagagcaagaagaagctctg
cgcgattttttaagagatgactcgcaggcacaagaaatttgggatatggcctgtcagctt
gagggtattactcgtaacgttggcaaacatgcgggtggtgtcgtcattgcgccgtcaaaa
ttagtcgatttctcgcctttgtattgcgatgagactggcggtggcttggttacgcagtac
gataaaaacgatgtcgaagatgcaggactggttaagttcgacttcttgggcttgcgaacg
cttacgatcattgcgtgggcaattaaaatgatcaaccctcggcgtgtcgctcatggtgag
caagcgctcgatatcaatcagatacccttggacgacaacgcggtattccagttgttgcaa
caggccgacacaacggcagtgtttcagctggaatctcgaggtatgaaggacctgatcaag
cgtctgagacccgataatttcgaggacattatcgcattagtggcgttgtttcgaccgggt
ccactgcagtcgggcatggtggataactttattaaccgcaaacacggccgcgaggccatt
gcctaccccgatgcacattaccaacatgagtcgctgaagccaattttggatcctacgtat
ggcattatcctgtatcaggaacaggtcatgcagattgcccaggtgctggcgggttacaca
ctgggtggagccgatatgttgcgtcgcgccatggggaaaaagaagcccgaagaaatggcc
aaacagcgcgaagtgtttcagtcgggagccgctgagcgcggcatagacccagaacttgcc
atccgaatttttgatttggtagaaaagtttgcgggctatggcttcaacaaatcgcactct
gcggcctacgctttggtgtcgtatcaaaccgcatggctaaaagtgcattacccggccgag
ttcatggcggccgttatgagctcggaacttcaaaataccgataagatcgttatttttatt
gaagaatgtcgcgccatgggcttgcccttgaaattacccgatgtcaatgaaggtcgctac
gcatttaccgtgaatgatctcggtgaaattgtttacggtttgggtgcgataaaaggcttg
ggtgagggccccgtagaggcgattttgcgcgagcgagatgcgaatggtcccttcagggat
ttattcgatttctgtgcgcgtactgatcgccgtcttttgaacaaacgtgccattgaagct
ttggtgcgagctggcgcctttgactcactgtcagaacctcgttgggtgctcatggctgcc
gttgacgatgcggtcaaagcggcggaacaaaaagcgagtaatacagcgtcaggtatcgat
gatttatttggcgaggtcatgccctcagcacccagtgcggatggcaacgtctatgcagct
ttcagatcggcgcgtccttggagcgggcgtgagcgtcttagcggcgaaaaagatacgctg
ggtttgtatgtcacgggtcaccctattgacgactatgaacgcgagatccgccaatttgtg
ccaactaaaatcgctgatctgcgtgctgacggaaaaagtagtcagcgcatcgtaggtctg
atagtggcggttaggacaatgaaaacgaagcgtggcgataccatggcgattgtgacctta
gatgatcgctcggcgcgtattgaggcgacagtttatgccgaggcctttcaggcctctcga
gaagcactgaccaaagatactttgattgtgatggaaggtggtgtagcacatgatgactac
tctggtggtctgtctatgcgcgccaaccgaattttgtcgctggatgaagctaggggtgcc
tatgcgagcgagttgcggataaccttgaacggcaaatcagacttggtgttagttgcgcaa
ctggcgcaggtactcaacccgtcggttgggggggcatgtcctgttgttatagattaccag
cgtcacgatgcgtcaagcgtgattgtcctcggagaggcttaccggatacatccgagtgat
gaactgttggccgctctgggtcaactaccagggactgtatcggtaaaactgctgtaccag
tag
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integrated database retrieval system
