Aspergillus flavus: AFLA_004208
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Entry
AFLA_004208 CDS
T01090
Name
(GenBank) hypothetical protein
KO
K12600
superkiller protein 3
Organism
afv
Aspergillus flavus
Pathway
afv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFLA_004208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afv03019
]
AFLA_004208
Messenger RNA biogenesis [BR:
afv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
AFLA_004208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_22
TPR_19
TPR_CcmH_CycH
TPR_16
TPR_8
TPR_14
TPR_1
TPR_17
TPR_12
TPR_11
TPR_6
TPR_7
TPR_Slam
TPR_MalT
TPR_9
ANAPC3
TPR_10
TPPII_C
ARM_TT21
Coatomer_E
Inhibitor_I71
TFIIE-A_C
Motif
Other DBs
NCBI-ProteinID:
KAF7628864
LinkDB
All DBs
AA seq
1424 aa
AA seq
DB search
MSSKAALKAVRTALDSKDFELAAEKAKALVQQEPQNYHANVFLGLALDKLNKTKDAENAY
LAATRAKENDKIAWQGLISLYEKQGNSRLDSYREAVIKLCQILGEANDSRRCEEIVDKYI
KFTKKNGTRSQCRKALELHLPSSPIYDILEGFIPHPAHTYLRLIEMTEAEEKEFINREIG
ERRTRLGARIEQVTLEVKREAFRRSELEQLYRGIVDWSHDDEVRRTYEEKIIERGCDVLA
VLPTNEKKAKREEVWAAARDMVIIKHPFELAWRIYLEWQDIQNFSEWDRNFLEEFIEFFP
EAGLTKVLKGFLASNLSPFPKKPKDSKEKDKDTKAKEQEAEDENDETNELGVQDSVLLMV
EGLEMSGSSIVAHRILGEFYLTLEEYESVVDVSRKGLRNIQDLVKTTGMKLQKTTDCMNI
ALANALIYYQSPRNHPEAKIIFEEILKRNPKSTSCLLGIGLILKVDEDYTEAVNFLERAL
ERDPSNLKVRAELSWSKALTGDLTSGLHGLQDVLEELQNSDLENRDFKSETFYRIGYCQW
ELDPSPGARKDRNGAYANFLASIQTNINYAPAYTSLGLFYADYKRDKGRARRCFHKAFEL
SPSEIEAAERLAKAFADQKEWDLVEAVSQRVVDSGKAKPAPGSKRRGYSWPYAALGTVQI
NKQQYAKSIVSFQAALRLSPGDYHSWVGLGESYHHSGRYIAATKAFEHAQQLEDSLSNSD
KEQVWFARYMLANVKRELGEYDDAIARYEDVLSIHPNEIGVSIALLHTLTESSWKSLDLG
LFNDCIGLARKAILVATSLALERVDIFNLWKGVGDACSVFSYVKSKTARAPLNEVQKLLS
TQLESAVFDILTDVDDVGQDRLSELKNTDDEACSPSDKCMYASILAYKRAIHVSAQDIHA
QAVAWYNLGWSEYRAFRCMQVSTSTPGKRQSRKFLKAAIRCFKRAIELEAGNSEFWNALG
VATTSMSPKVAQHAFVRSLHLNDRTAQVWTNLGALYLIHNDIQLANEAFTRAQSTDPDNS
QAWIGQGFLALLFGDPREARGLFEHAFDISNSSAPLPKKQYTLSLFDHLMSDSSASNEVS
ALIQPFFALHQLSSQDPSDLPFVHLSSLLAERIGEISDAEASLRTLCTAVEAEYEVSESA
SALSRFAQANADIARVLLARHEFEEAAEKAETALMLSGEEDAEKFDPETNSKLRLSAHLT
AGLAHYYLRNMDSAIDMFRDALQEADNAPEVVCLLAQVLWAKGGEEERAVARQQLFDCVE
NNPEHVGAVTLLGAIAILDSDQDAIEAVQSDLQSMITRDDIEIHEQTKLVKLLTAMSTLG
FTDNSGVPEETRRVGEAAAAVMRSPYQPQGWMELAAASDEPYPAEMGVKRALRSVPPQGN
LDAVDLSTAYAQTGKASDALRSIMIAPWKQHGWEELNHTVSATN
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtaaggcagccctgaaagcggtgcgaacagcactggactcgaaagatttcgag
cttgcggccgagaaagccaaagctcttgtgcaacaggaacctcaaaactaccacgcgaac
gtttttttagggcttgcgctcgataaactcaacaagacaaaagatgcggagaacgcctac
ctcgcagcaacccgtgcgaaagagaatgacaagatagcatggcaagggctgatcagtctg
tatgagaagcaaggaaacagcaggctagactcctatcgcgaggcggtcataaagctttgc
cagatccttggtgaagcaaatgacagtcgacgctgcgaagaaatcgtagacaaatatatt
aaatttacaaagaaaaatggcacacggtctcaatgtcgaaaggccctcgaactacatttg
ccgtcgagtcctatctacgatatcctagagggtttcatcccgcaccctgcgcatacatat
cttcgcctgatagagatgaccgaagccgaagaaaaagaattcataaacagggagatagga
gaaaggcgtacacgactgggtgcgcgcattgagcaagtcaccttggaagtgaagagggag
gccttcagacgtagcgaactcgaacagctgtatcgcggaatcgtggactggagccatgac
gatgaggtccggcgtacatatgaagagaagataatagagcggggctgcgatgttctcgcc
gttcttccgacaaacgaaaagaaggcgaagcgcgaggaggtgtgggcggcagctcgtgac
atggtcattatcaagcaccccttcgagctggcatggagaatctatcttgaatggcaagat
attcaaaacttctcagagtgggatcgcaatttcctagaggaatttatcgaattctttcca
gaagcggggcttactaaagtcctgaaaggtttcttggccagcaacctttcaccatttcca
aagaagcccaaagactccaaggagaaggacaaagatactaaggcaaaggaacaggaggcc
gaggatgaaaatgatgagaccaatgaactcggtgttcaagacagtgttctgctgatggtc
gaaggacttgaaatgtccggatcctcaattgttgcgcatcgcatcttgggtgaattttac
ttgacccttgaagagtacgagagcgttgtggatgtttctcgaaaaggacttcgcaacatt
caagatctggtcaaaacaactggaatgaagcttcaaaagacaaccgattgtatgaatatc
gctcttgcaaacgccttgatctactatcagtcgccccggaaccaccctgaggccaaaatt
atcttcgaagaaatcctaaaaagaaacccaaaatccacgagctgtctacttggaattggt
cttatcctcaaagtagacgaagattataccgaggccgtcaatttcctggagcgtgctctg
gaacgagacccatcgaacctcaaggttcgtgccgagttgtcctggagcaaggcactgaca
ggtgatcttacatccggacttcacgggctccaagatgtgcttgaagaactacaaaattcg
gatctggaaaatagagattttaaatcggaaactttttatcgtattggttattgtcagtgg
gagttggatccatcgcctggcgcacgcaaggaccgcaatggcgcctacgctaatttcctt
gcgtcaatccagaccaacataaactacgcgcccgcttacactagtctcggactattctac
gccgattacaagagggacaaaggtagggcgcgaagatgttttcacaaagcctttgagctg
tcaccatccgagattgaagcagctgaacggctcgcaaaggcatttgcagatcaaaaagag
tgggatcttgttgaagctgtgtcacagcgtgttgtggactccggaaaagctaaacctgca
ccgggctcgaaacgacggggttacagctggccgtatgctgctttgggcactgtccagatc
aacaagcaacaatatgcgaagagtatcgtctccttccaggcagctttgcgactgtcaccg
ggcgactatcattcatgggtcggcctaggagagagctaccaccattctggccgttacatt
gccgctacgaaagccttcgagcatgcccaacagttggaggactccctctccaactcagat
aaggaacaagtctggttcgcacggtacatgctggcgaatgtcaagcgggagcttggagaa
tacgacgatgctattgcgagatacgaggatgttctaagtatccatccgaatgaaatcggc
gtgtctattgcactactccatacactcacggaaagctcttggaagagccttgatctgggt
ctttttaacgactgcattggactggcccgtaaagcgattctggtagcaacatccctagcc
ctggaaagagtcgacatcttcaatctatggaagggtgtaggagatgcatgctcagtcttc
tcctatgtcaagtcgaagactgcaagagccccattaaacgaagtacagaaactactctct
acccagcttgagtctgcagttttcgacatccttacagatgtggatgacgtcggacaagat
cgtctctcggaattgaaaaatacagatgatgaggcctgcagcccatcagataaatgtatg
tacgcctcgattctggcatacaagcgcgccatccatgtgtcagcacaggacattcatgct
caggcggttgcttggtacaatcttggttggtccgaatacagggcgttcagatgtatgcaa
gtgtctacgagcacaccaggcaagaggcagtcgcggaaatttttgaaggcggcaatccga
tgcttcaaacgggccattgagctagaggctgggaactctgaattctggaacgcccttggt
gtagcgactacaagtatgagcccgaaggtagcacagcatgcctttgtcagaagtctccat
cttaacgacagaactgcgcaagtttggaccaacctgggggcactttacctgatccacaat
gacatccagcttgcaaatgaagcctttactcgtgcgcaatctacagatccagacaattcc
caagcctggattggacaaggcttccttgcccttctatttggtgacccgcgggaagccagg
ggtctgtttgagcacgcctttgatatctccaactcgtcagccccattgcctaagaagcag
tacacgttaagcttgttcgatcatcttatgtcagactcttcggcttcgaacgaggtttca
gcgctgattcaaccgttctttgcacttcaccagctctcttcgcaggacccatccgattta
cccttcgtgcatctatcctctcttttggctgagagaattggcgaaatatcagacgcagaa
gccagtctacggaccctctgtaccgctgtagaggcagaatacgaggtgtccgagtcagcg
tcggccctctctcgattcgcccaggcaaacgcggatattgctcgtgtactccttgcacgt
catgaattcgaggaagctgctgaaaaggcagagacagcgctcatgctatcaggggaagaa
gatgccgagaagttcgatcctgaaacgaacagcaagcttcgcttgtcagcccacttgaca
gcgggcctggcgcattattatctacggaacatggacagtgcgattgatatgttccgtgac
gctctccaggaagcggacaacgcgcctgaagtggtatgtcttctcgcacaagtgctatgg
gctaaaggtggcgaggaggaacgggccgtggctcgccaacagctatttgactgtgttgag
aacaaccccgaacatgtcggggctgtcaccttactgggtgccattgcgatccttgattcc
gaccaggacgccattgaggccgtccaatctgacttgcagagcatgatcacgagagacgat
attgagattcacgaacagactaagttggtcaagcttttaacagccatgtctaccttagga
ttcaccgataactctggggttcccgaggagacaagacgtgttggggaagctgcggcagcc
gtgatgagatcaccttatcagcctcaaggttggatggaattagcagcagcctccgatgaa
ccctatcccgcggagatgggcgtcaagagagctttgcgtagcgttccaccccagggcaac
cttgacgcagttgacctgtctaccgcatatgcacaaaccggaaaggcgagtgatgcgctc
cggtcgattatgattgcaccatggaaacagcatgggtgggaagaactaaatcacacggtg
tctgcaacaaactaa
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integrated database retrieval system
