Alicyclobacillus mengziensis: JZ786_02840
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Entry
JZ786_02840 CDS
T07322
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
afx
Alicyclobacillus mengziensis
Pathway
afx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JZ786_02840 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afx03021
]
JZ786_02840 (rpoB)
03400 DNA repair and recombination proteins [BR:
afx03400
]
JZ786_02840 (rpoB)
Enzymes [BR:
afx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JZ786_02840 (rpoB)
Transcription machinery [BR:
afx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JZ786_02840 (rpoB)
DNA repair and recombination proteins [BR:
afx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JZ786_02840 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
HupE_UreJ_2
Motif
Other DBs
NCBI-ProteinID:
QSO47980
UniProt:
A0A9X7W041
LinkDB
All DBs
Position
637978..641508
Genome browser
AA seq
1176 aa
AA seq
DB search
MQGHMVKYGWRERRSYSRIREVLDLPNLIEIQQRSYEWFLREGLREMFDDISPISDFTGN
LVLEFVDYSLGEPKYDVEESKERDVTYSAPLRVKVRLLNKETGEVKEQEVFMGDFPLMTE
TGTFIINGAERVIVSQLVRSPSVYFNSKIDKNGKKTFAATVIPNRGAWLEFETDAKDVVY
VRIDRTRKLPITVLLRALGLGTDAEIINLLGEDEYLRNTLDKDTTDSTERALVEIYERLR
PGEPPTVENARVLLASRFFDPKRYDLANVGRYKINKKLHIKNRLLNQRLAETLVDLDTGE
IVAEAGQEIDRRLLDKIIPALEGNVGRFAVRSTPELTEADEVPLQMVKIFSPIEDGKILH
VIGNGTIDRSVKHIMPADILSAVSYFFGLLHGVGSTDDIDHLGNRRLRSVGELLQNQFRI
GLSRMERVVRERMSIQDPSGITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTH
KRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARINEYGF
IETPYRRVNPDTGEVTEHIDYLTADEEENYIVAQANAKLTEDSRLANEEVVARYRGDTLL
VPRERIDYMDVSPKQVVSVATAMIPFLENDDANRALMGSNMQRQAVPLLVPKAPVVGTGM
EHQAAKDSGVCIVAKRPGIVERVTAREIWVRTYHEVDGNRVRGDLDKYKLLKFMRSNQNT
CINQRPVVREGQEVVAGDILCDGPATEMGELALGRNVLVAFMTWEGYNYEDAILLSEKIV
KEDVYTSLHIEEYELEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRIGAEIRTGDIL
VGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGAGIVVDVKVFTRENGDELP
AGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVVARILPEEDMPFMEDGTPVEIVLNPLGV
PSRMNIGQVLETHLGMAARALGIHVATPVFDGAHAEDVFSTLGEAGYDPDGKHLLYDGRT
GERFDNRVTVGYVYMLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWA
LEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMDV
KILSEDEQEIVMRESDEDDDTGEKLNLNLESREIGD
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
ttgcagggacacatggtcaagtatgggtggcgtgagcgccgctcctactcgcgcatccga
gaagtcctggaccttccaaatctgattgagatccagcagcgctcttatgagtggtttttg
cgtgagggtcttcgcgaaatgtttgacgacatttcgccgatttctgacttcacagggaac
ttggtgctggagtttgttgactacagccttggtgagccgaagtatgacgtggaagagtcc
aaagaacgggatgtgacctattctgcgccgttgcgcgtgaaggtacgcctgttgaacaag
gaaacaggagaggttaaggagcaagaagtgttcatgggtgactttccgctcatgacagaa
accggaaccttcattatcaatggtgctgaacgcgtcattgtcagtcagttggttcgttct
ccaagtgtgtacttcaacagcaagatcgacaaaaacggtaaaaagacctttgctgcaacc
gtgatcccgaatcgaggcgcatggttggaatttgagacggacgcgaaagacgtcgtctac
gtcaggattgaccgcactcgcaagctcccgattacggtattgctccgtgccttgggtctt
ggcaccgatgcggagattattaatttgcttggtgaagacgagtaccttcgtaacaccctt
gacaaggatactacggattcaacagaacgtgcgctggtggaaatctacgagcgtttgcgt
cctggcgagccgccgacggttgagaatgcgcgggtacttttagcatcgcggttcttcgat
ccaaaacgctatgacctggcgaatgttggccgctacaagatcaacaagaaactccatatc
aaaaaccggctcttgaatcaacggctggctgaaactctggtcgatctcgatacaggtgag
atcgttgcagaggccggtcaagaaattgaccgtcgtttgctggacaaaatcatccctgct
ctcgaaggaaacgtcgggcgttttgctgttcgctcaacaccagagttgacagaagcggac
gaggtacctctacagatggtgaaaatcttcagcccgattgaggatggcaagatcctgcat
gtgattggcaacggcaccatcgatcgctcggtcaagcacatcatgccggctgatatcctt
tcggcggtgagttatttctttggcctgctccatggcgtcggctccacggatgacatcgac
caccttggcaatcgacgtttgcgctctgtgggcgagctactacaaaaccaattccgcatc
ggtttgtcgcgtatggaacgcgtggttcgtgagcggatgtccattcaggatccaagtggc
atcacgccgcaggcgctcattaacatccgtccggtcatcgcatcgattaaagagttcttc
ggttcgagccagttgtcccagtttatggaccagaccaacccgttagccgaattgacgcac
aagcgtcgcctctcggctcttggaccgggcgggctgacccgtgaacgggctggattcgaa
gttcgtgacgttcactactcacattacggtcgcatgtgcccaattgagacgcctgaaggg
ccgaacattggccttatcaactcgttgtcttcatacgcgcgcattaatgagtacggcttt
attgaaacgccgtatcgccgtgtgaacccggatacgggcgaggttacagaacatatcgac
tacctgacggcagatgaagaagaaaattacattgtggcccaggccaatgccaagctgacg
gaagacagtcgccttgccaatgaagaggttgtggcacgctaccgtggcgacacattgttg
gtacctcgcgaacgcattgactatatggatgtgtcaccaaaacaagttgtgtctgtagcg
acggccatgattccgttcctggaaaacgacgacgcgaaccgtgctttgatgggttcgaac
atgcaacgtcaagcagtcccgcttttggtgccgaaggctccggttgttgggacagggatg
gaacaccaggctgcgaaggattctggcgtatgcattgttgccaagcgccctggtatcgtg
gaacgtgttacggctcgggagatttgggtccgcacgtatcacgaggtcgacggcaatcga
gtgagaggcgacctcgacaaatataagctcctgaagtttatgcgctccaaccagaacaca
tgtatcaaccagcgtcctgttgtccgtgaagggcaagaagtggttgctggagatatcctc
tgtgacggtccggcaactgaaatgggcgagttggcgctggggcgaaatgtcctcgttgca
ttcatgacctgggaagggtacaactacgaagatgctatcctgctctcagagaagattgta
aaagaggacgtatacacatctcttcacatcgaggagtacgaactcgaagcgcgtgacaca
aaactggggcccgaggaaatcacccgagatatcccgaatgtgggtgaagatgcgcttcgt
aaccttgacgagcgcggcattattcgcatcggtgctgaaattcgcacaggagacatcctg
gtcggtaaggtcactccgaaaggtgtcactgaactgactgctgaagaacgcctgctccat
gctattttcggtgaaaaggcacgcgaggttcgggatacctcactgcgtgttcctcacggc
ggtgcgggtattgtcgtcgacgtaaaagtgttcacacgcgagaatggagacgagttgcct
gcgggtgtgaatcaactggtgcgagtctacattgcccaaaagcgtaaaatttccgaaggc
gacaagatggctggtcgccacgggaataaaggtgttgtagcccgtattcttccagaagaa
gacatgccgtttatggaagacggtacgccggtcgaaattgtcttgaatccactcggtgtg
ccttcccgtatgaacatcggacaggtgcttgaaacgcaccttggcatggctgccagagcg
ctcggtattcacgtggcaacacccgtgtttgacggtgcgcatgcagaggacgtgttctcg
acgcttggagaagcgggttatgacccagatgggaaacacctgctctacgatggcagaact
ggagaacgctttgataaccgggtcacagttggctatgtctatatgttgaaactgcaccac
ttggttgacgacaagatacatgcccgatcgactgggccgtactccctcgtcacgcagcaa
ccgctcggtggtaaggcacagtttggcggccagcgctttggcgagatggaggtttgggcg
ctcgaggcctacggtgcagcctataccctgcaggaaattttgacggtcaagtcggacgat
gtggtcgggcgtgtcaagacgtacgaggctatcgtaaaaggcgagaacgtaccggaacca
ggcgtacctgaatcgtttaaggttcttatcaaggagctgcaaagcctaggcatggacgtt
aaaatcctgagcgaagacgagcaggagattgtcatgcgggagagcgacgaagacgacgat
accggggagaaattgaacctaaaccttgagagccgggaaatcggggactga
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integrated database retrieval system
