Antechinus flavipes (yellow-footed antechinus): 127539620
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Entry
127539620 CDS
T08818
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03013
Nucleocytoplasmic transport
afz05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127539620
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127539620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127539620
03036 Chromosome and associated proteins [BR:
afz03036
]
127539620
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127539620
Chromosome and associated proteins [BR:
afz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127539620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Nup160_C
TPR_NUP160_120_M
Beta-prop_Nup120_160
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
127539620
NCBI-ProteinID:
XP_051819772
LinkDB
All DBs
Position
6:complement(241647599..241692287)
Genome browser
AA seq
1401 aa
AA seq
DB search
MMAAAGALEKSFVELCGAERDTQRHFRDFSVSCSELVGLSGAVKYGESAGGFYYMESSKL
FSVTRNRFIHWVTSGDTLELVEESLDINLLNNAIRLKFQNCNVLPGGVHVSETHNHVIIL
ILTNHTVHRLVLPHPSRMYRSELVTESQMQSIFTDIGKVDFSDPCNYQLIPTVPGLAPNS
TTSIAWLSSEGEAMFALPSASGGLFVLKLPPHDIPGVMSVVELKQSSVMQRLLTGWMPTA
IRGDQSPSDRPLSLSVHCVEHDAFIFALCQDHKLRMWSYKDQMCLMVTDMLEYVPVNKDL
RLAAGTGHKLRLAYSPSMGLCLGVYMHAPKRGQFCVFQLVSTENNRYSLDHISSLFTSQE
TLIDFTLTPTDIWALWHDVENQTIVKYINFEHNVAGQWNPVFMQSLPEEEITIRDDQDPR
ETYLESLFTPGRFTNAAIFKALQIFRRGTERNLDLSWSELKKEVTLAVENELQASVTEYE
FSQEEFRQLQVEFWSKFYACCLQYQEALSRPLALHMNPHANMMCLLKKGFLSFLVPCALV
DHLYLLPDENLLTEDETTISDDLDIARDVICLVKCLRLIGESISLEMSFMMEMACYHLQS
PERAAEQILEDLIANDVENVMEDICSKLQEIRNPVHAIGLLIREMDYETEVEMEKGFNPA
QPLNVRMNLAQLYGSGTTGNVICRGVCKIASTRFLICRDLLILQQLLTRLGDAVLLGGNQ
LFQSQQDLLHRTAPLLLSYYLIKWGSQCLASEVPVDTLESNLQHLSVLELTDSNTLTSHK
LVSNPQTIVELFFQEVARKHILSHLFSQPKAPLTQTDVNWPQLITTITNYFLQLLWPSNP
GCIFPECLMGSCQYTQLQEYIRLLQPWCQVSVGSCRFMMGRCYLVMGEGHKALECFCQAA
SEVGREEFLDRLIRTEEGEIVSTPRLQYYDKVLRLLDVVGLPELVIQLATLAITEAGDDW
KSQATLRTCIFKHHLDLGHNNEAYEALTQNPDPSRQLDCLRQLVVVLCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
LRGLEKQGNCYLAAINCLRLIRPEYAWIVQPAAGAVYERPGASPKRNHDGECTAVPTSRQ
VEILELEDLERECSLARIRLTLAQHDPTAVAIAGSSSAEEMVTLLVQAGLFDTAVSLCQT
FKLSLTPVFEGLAFKCIKLQFGGEAAQAEAWGWLAANQLSSVITTKESSSTDEAWRLLSS
YLEKHKCQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATSPMVWLPYSAIDQLLQSLGENSANTHNLALHQKILD
KLNDYQEKVDRATRDLVYRRH
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcggcgggagcgttggagaagagtttcgtggagctgtgcggcgccgagcga
gacacgcagcggcacttccgtgacttctccgtcagctgctccgagcttgtgggtttatca
ggagctgtgaaatatggggaaagtgctggtggcttctactatatggaaagcagcaagctg
ttctctgtcaccagaaacaggttcattcattgggtcacttctggcgatactttggagctg
gtggaggaatctctggacataaatcttctgaataatgccatccgcctcaaattccaaaat
tgtaatgttttaccaggaggtgttcatgtctctgagactcataatcatgtgatcattttg
attttaaccaatcatacagtacacagattagtactgccacacccttcccggatgtatagg
agtgagttggtaaccgagagtcaaatgcaatcgatattcactgatattgggaaagttgat
tttagtgatccttgcaactaccaattaattcctacagttcctggactggcccccaattct
accacttcaatagcttggttaagcagtgagggggaagcaatgtttgctctgccttcagct
tctgggggattatttgtccttaaactgcctcctcatgatatacctggtgttatgtcagtt
gtggaattaaaacagagctcggtgatgcaacgtttgcttacgggctggatgcccacagct
atcaggggtgaccagagcccttctgaccgccccctcagtctctctgttcactgtgtggag
catgatgccttcatctttgcactttgccaggatcacaagctccggatgtggtcatataag
gaccaaatgtgcctgatggtaactgacatgctagaatatgtacctgtaaataaagacctg
agactagcagctgggactggccacaaattgcgccttgcctattctccttccatgggactc
tgcctgggtgtctatatgcatgcgccaaaacgggggcagttctgcgttttccaattggtg
agcactgaaaataaccgctacagtctagatcacatttcttcattattcacatctcaggag
accctgattgactttaccttaacacccactgatatttgggctctgtggcatgatgttgaa
aaccaaacaattgtaaaatacatcaattttgaacataatgttgcaggtcagtggaaccca
gttttcatgcagtctctgccggaagaggaaatcactatcagagatgaccaagatccaaga
gagacatatctagagagtcttttcacacctggacgattcacaaatgccgctattttcaaa
gctttacagattttccgtcgaggaacagagagaaatttggatctttcctggagtgagctc
aagaaagaagttactttagctgttgaaaatgagctccaggcaagtgtgacagagtacgaa
ttctcacaggaagagtttcgacagttacaagttgaattctggtccaagttctatgcttgc
tgtcttcagtaccaagaagcactctcacgccctcttgcactgcacatgaaccctcatgca
aatatgatgtgcctattaaaaaaagggttcctctcttttcttgtgccctgtgccctcgtg
gatcatctctatctcttgcctgatgagaatcttttgacagaggatgagaccaccatttct
gatgatttagatattgcacgtgatgttatatgtcttgtcaaatgcctccgattgattggg
gaatccatttctctggaaatgtcattcatgatggaaatggcttgctatcaccttcaatct
ccagagagggctgcagaacagattctggaagacttgatcgcgaatgatgtagaaaatgtg
atggaggatatctgcagtaaattgcaggagatcaggaatccagtccatgcaattggactt
cttatacgggaaatggactatgagacagaagtagaaatggaaaaggggttcaatcctgct
cagcctctaaatgttcgcatgaaccttgctcagctgtatggcagtggaacaacagggaat
gtgatttgcagaggtgtgtgtaaaattgctagtactcgcttccttatctgccgagatcta
ttgatcctacagcagctattgacgaggctaggagatgctgtgcttttaggagggaatcaa
ctgttccaatctcagcaagaccttctccatcggacagcccccttgctgttatcatattac
ctcattaagtggggaagtcagtgtttggcatctgaagttccagtggatacactggaatcc
aatctacagcatttatcagtattagagctgacagactccaacactttgacgtcacataaa
cttgtatccaaccctcagacaattgtggagttatttttccaagaagtggccagaaaacac
attctgtctcatctcttctcccaaccaaaggctcctctcactcaaactgatgtgaattgg
cctcagctgattactacaattaccaattatttcttacaacttttatggcctagcaatcct
ggatgcatctttccagagtgtttgatgggaagctgtcagtacacacagttacaggaatac
attcgcctgctacagccttggtgtcaagtgagtgttggctcttgccgattcatgatgggc
cgatgctacctggttatgggagaaggacataaggctctggaatgtttttgccaagctgct
tctgaagtgggcagagaagaattcttagatcgattgatccgcacagaggagggagaaata
gtttctactccccgactacaatattatgataaggttttgcgattattggatgtggttggt
ttgcctgaactagtgattcagttggccacattagctattactgaagcaggtgatgactgg
aaaagtcaggctactttgaggacatgcattttcaaacatcatttggatttaggacacaat
aatgaagcttatgaggctttaactcagaatccagaccccagcaggcagctagattgcttg
cgacagttggtggtagttctctgtgaacgttcccaacttcaggatctggttgagtttcca
tatgtgaacctgcataatgaggttgtggggataatagagtcacgtgcccgagctgtagat
ctgatgactcataattattatgaacttctgtatgccttccacatctatcggcacaactac
cgaaaagctggtacggtgatgttcgagtatggtatgcgtcttggtagagaagtacggact
ctccggggacttgagaaacaaggaaactgttacctggcagccatcaactgcctgcggctg
atccgtccagaatatgcgtggattgtacagccagctgccggggcagtgtatgaacgccct
ggagcctccccaaaaaggaatcacgatggagaatgcacagctgtcccaacgagccgacaa
gttgaaatcttggaactagaagacctagaaagggagtgttcattggcccgcatccgcctc
actctggctcagcatgaccccaccgcagttgccattgcaggaagctcatcagcagaggaa
atggtcactctcttggtgcaggccggcctatttgacacagccgtctcactgtgtcagact
tttaaactctccctaacaccagtctttgagggacttgctttcaagtgtatcaagttgcaa
tttggtggtgaggcagcacaggcagaggcgtggggttggttagcagccaatcagctttca
tctgtcatcaccaccaaggagtccagttctactgatgaagcgtggaggttgttgtcatct
tacctggaaaaacacaaatgccaaaataacttatatcatcactgtgtaatcaataagcta
ctgtcccatggggttcctctacccaattggcttataaatagttacaagaaggttgatgct
gctgaattactccgtctgtacttaaactatgaccttttagaagaagctgtagatttggtt
tcagaatatgttgatgctgtacttggaaaaggacatcagtactttggaattgagtttcct
ctgtctgcaacctctccgatggtatggcttccatactctgctattgaccagcttcttcaa
tcattgggagaaaatagtgccaacacacacaaccttgctctgcatcagaaaatacttgac
aaattgaatgactaccaggaaaaagttgaccgggcaacacgggatttggtgtatcgccga
cactag
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integrated database retrieval system
