Antechinus flavipes (yellow-footed antechinus): 127554597
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Entry
127554597 CDS
T08818
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
127554597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afz04040
]
127554597
Ion channels [BR:
afz04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127554597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
ATP-synt_B
IQ
GPHH
IQCJ-SCHIP1
Neur_chan_memb
FUT8_N_cat
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
127554597
NCBI-ProteinID:
XP_051842202
LinkDB
All DBs
Position
3:complement(427329601..427485051)
Genome browser
AA seq
2007 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRIAEEKATKPKQGRKDEDDENGPKANSDLEAGK
SLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPIRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINITSYFNSSW
DGNGTYYNKTVSTFNWDDYIEDKSHFYILEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESREFSGTGGG
GGFSESSSEASKLSSKSAKERRNRRKKRKQKEQSGEEEKQEEEFHKSESEDSIRRKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSIFSFRGRAKDIGSENDFADDEHS
TFEDNDSRRDSLFVPHRHGERRHSNVSQASRSSRVLPILPVNGKMHSSVDCNGVVSLVGG
PSALTSPTGQLLPEGTTTETEIRKRRSSSYHVSIDLLEDPSGRQRAMSIASILTNTMEEL
EESRQKCPPCWYKFANTCLIWDCCEPWLKVKHIVSLIVMDPFVDLAITICIVLNTLFMAM
EHYPMTEQFSGVLYVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGLIVSLSLMEL
GLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVV
GMQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTM
CLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVK
RKLREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTVEIGKDLNYLKDGNGTTSGI
GSSVEKYVIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNAS
SSSEGSTVDVGAPAEGEQPEAEPEEALEPEACFTEGCVRKFKCCQVSIEEGRGKLWWNLR
KTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEML
LKWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTGEMFDIS
VVNNLSECQALIDSNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVE
WQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSQE
MTNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHP
GSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMF
YEVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDIL
FAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAVIIQRAYRR
HLLRQKVKKVSCIYKKDKSKEGNGLPIKEDMIIDKLNENSTPEKTDVTPSTTSPPSYDSV
TKPEKEKYEKDKTEKEDKGKDVREGKK
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagctttcgctacttcaccagggaa
tcccttgctgctattgagcaacgcattgcagaagaaaaagctacaaaacccaaacaagga
cgaaaggatgaggatgatgaaaatggccccaaagcaaatagtgatttggaagcaggaaaa
tccctcccatttatttatggagacattccacccggaatggtgtcagagcccttggaggac
ctggatccatactatatcaataaaaaaacttttatagtattgaataaagggaaggcaatc
ttccgattcagtgccacatctgccctgtacattttaactcctttcaaccctattagaaaa
atagctattaagattttggtacattctttattcagcatgctcattatgtgcactattctc
accaattgtgtgtttatgaccatgagtaatcctccagactggacaaagaatgtagagtac
acattcacaggaatttatacctttgaatcgcttattaaaattcttgcaaggggcttctgt
ttagaaggtttcacatttcttcgggacccctggaactggcttgatttcactgtcattact
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcattgaaaacaatttcggtcattccaggactgaagactattgtgggggcc
ctgatccagtcagtgaagaagctttctgacgtcatgatcctgactgtgttttgtctgagt
gtatttgctctcattggactacagttgttcatgggcaacttgaggaataaatgtttgcaa
tggcccccagataactctacttttgaaataaacattacttcctactttaatagctcatgg
gatggaaatggtacctattacaataagacagtgagcacatttaactgggatgactacatt
gaggacaaaagtcatttttacattttagaagggcaaaatgatgcattgctttgtggtaac
agttctgatgcaggtcaatgtccagaaggatacatatgtgtgaaagctggcagaaacccc
aactatggctacacaagctttgacacattcagttgggctttcctgtccctgtttcgcctg
atgactcaagacttctgggaaaatctttatcaactgacacttcgtgcagctggcaagaca
tatatgatattttttgtcctggtaattttcttgggttctttctatcttataaatttgatc
cttgctgtggttgccatggcctatgaagaacaaaatcaggccactttggaagaggcagag
cagaaggaggctgaatttcagcagatgttggaacaacttaagaagcaacaagaagaagct
caggcagcagcagcagcagcatctgcagaatctagagaattcagtggaactggtggggga
ggaggcttctcagagagctcttcagaagcatcaaagctgagctcaaaaagtgcaaaggaa
aggaggaacaggagaaagaaaaggaaacagaaagaacagtctggagaagaagagaagcaa
gaagaagaatttcacaaatctgaatctgaagatagtatcagaaggaaaggttttcgtttt
tccattgaaggaaatcgcttgacctatgaaaagagattctcttctccccaccagtctctg
ttgagcatccgcggctctcttttttctccaagacgcaacagccgaacgagcatcttcagc
ttcaggggtagagcgaaagatattggttctgaaaatgactttgccgatgatgaacacagc
acttttgaagacaatgacagtagaagagattcgctgtttgttccacacagacacggagaa
cggcgccacagtaacgtcagtcaggctagccggtcatctcgggtgctgcccatattgcca
gtgaatggaaaaatgcacagctcagtggattgcaatggcgttgtttcgctggttggtgga
ccgtcagccctgacgtcaccaacggggcaactgctgccagagggtaccactacagaaaca
gaaataagaaagagacgatctagttcttatcatgtgtccatagatttgctagaagaccct
tctggaaggcaaagagcaatgagtatagccagtatactgaccaacacgatggaagaactt
gaagaatccagacagaaatgcccaccatgttggtataaattcgctaacacatgtttgatc
tgggattgctgtgaaccatggctaaaagtgaagcacatcgtcagtctcattgtgatggac
ccatttgttgacctggcaattaccatctgcattgtcttgaatactctattcatggccatg
gaacattatcctatgactgaacagtttagtggggttctttatgtaggaaacctggttttt
actggaatcttcacagcagaaatgtttctcaagataattgccatggacccctattattat
ttccaagaaggctggaatatttttgacggtttaattgtcagccttagtttaatggagctt
ggcctggcaaatgtagaaggactttctgtactcagatcattcagactgcttcgagttttc
aagttggcaaaatcttggcccacgttgaatatgctgataaagatcattggtaactcagtc
ggggctctgggaaacctgaccttagtactggccatcattgtcttcatttttgctgtggtc
ggcatgcagctctttggcaagagctacaaagaatgtgtctgcaagatctccaatgactgt
gaactgccacgctggcacatgcatgacttcttccattccttcctgattgtgttccgggtg
ctgtgtggagaatggatagagaccatgtgggactgtatggaggtggcaggccaaaccatg
tgtcttactgtcttcatgatggtcatggtgattggaaatctagtggtattgaacctgttt
ctagccttgctactgagctcctttagttcagacaaccttgctgccacagatgatgataat
gaaatgaataatctccagattgctgtgggaaggatgcagaagggaatagattatgtgaaa
agaaaattacgtgaatttatccagaaagcctttgttagaaaacagaaagctttggatgaa
atcaaaccacttgaggatctaaacaataagaaagacagctgtatttctaaccataccaca
gtagaaataggcaaagatctgaattatcttaaagatgggaatggaacaaccagtggaata
ggcagcagtgttgaaaaatatgttattgatgaaagtgactacatgtcattcataaataac
cccagcctcactgtaacagtaccaattgctgttggagaatctgactttgagaatttgaat
acagaagaattcagcagtgaatcagatctagaggaaagcaaagagaagttaaatgcatct
agttcgtctgaaggtagcactgtggatgtgggagcccctgcagaaggagaacagccagaa
gcagaaccagaagaagccctggagccagaagcctgcttcacagaaggctgcgtacggaaa
ttcaagtgttgtcaggtcagcatagaagaaggcagaggaaaactctggtggaacttgaga
aaaacttgctataagatagtggaacataattggtttgagaccttcattgtcttcatgatc
ctcctaagtagtggtgctctggcctttgaagatatatatattgagcaacgaaaaacaatt
aagacaatgttggaatatgctgacaaagttttcacatacattttcattctggaaatgctt
ctaaagtgggttgcatatggtttccaaatgtattttacaaatgcatggtgctggctggac
ttccttatcgttgatgtctctttggtcagcttaactgcaaatgccttgggctactcagag
cttggtgccatcaaatctcttcggacactaagagctttgaggcccctaagagccttatct
cgatttgaaggaatgagggtggttgtgaatgcccttttgggtgcaatcccctctatcatg
aatgtacttctggtctgtctgatattttggctaatattcagtatcatgggagtgaatctt
ttcgctggcaagttttaccactgtatcaacaccaccactggagagatgtttgacataagt
gttgtcaacaatttgagtgaatgccaagctcttatagacagtaatcaaactgcccgatgg
aaaaatgtgaaagtaaactttgataatgtgggacttggatatctttctttgttacaagtg
gctacatttaaaggatggatggatatcatgtatgcagctgttgattcacgaaatgtagag
tggcaacccaagtatgaagacaatctatatatgtatctttattttgtcatctttataatt
tttgggtcattcttcactctgaatcttttcattggtgtcatcatagataacttcaatcag
cagaaaaagaagtttggaggtcaagatatctttatgacagaagaacagaagaaatactac
aatgccatgaaaaaactagggtccaagaaaccacaaaaacctatacctcgacctgcgaat
aaatttcaaggaatggtctttgattttgtaaccagacaagtctttgatatcagcatcatg
attctcatctgcctcaatatggtcaccatgatggtggagactgatgatcagagtcaagaa
atgactaatattttatattggattaacctggtattcattgtcctcttcactggagaatgt
gtgctgaagctgatctctcttcgctactattattttaccatagggtggaatatatttgat
tttgtggtggtcattctctccattgttggtatgtttctagcagagctgatagaaaaatat
ttcgtgtcccctaccctgtttcgagtgatccgtctcgccaggattggacgaatccttcgt
cttattaaaggagctaaggggatccgcaccctgctctttgctttgatgatgtccctccct
gctctatttaacatcgggctccttcttttcctggtcatgtttatttatgctatctttgga
atgtccaactttgcctatgtcaagagggaagtaggaattgatgatatgttcaactttgaa
acctttggcaacagcatgatctgcctcttccaaattaccacatcagctggttgggatggt
ttgcttgcacccattcttaacagcggaccaccagactgtgaccctgaaaaagatcaccct
ggaagctctgtcaaaggagattgtggtaacccctctgttgggattttcttttttgtcagt
tatattattatctcattccttgtggttgtgaacatgtacattgctgttatcctggagaat
ttcagtgttgctactgaagagagcgcggagccactgagtgaggatgactttgagatgttc
tatgaggtttgggagaagtttgatcctgatgctacccagttcatagaattctgtaaactc
tctgattttgcagctgccctggatccacctcttcttatagcaaaaccaaacaaagtccaa
ctcatagccatggatctgcccatggtaagtggggaccgaattcactgccttgacatctta
tttgctttcacaaaacgtgttttgggtgaaagtggggagatggatgctctccgaatacag
atggaagagcgcttcatggcatctaatccttccaaagtctcttatgagccaatcaccact
actctgaaacgcaaacaggaggaagtgtccgcagtcataatccagcgggcttatcgacgt
catctcttgaggcaaaaagttaaaaaagtttcatgtatatataaaaaagacaaaagtaaa
gagggcaatggactgcctatcaaagaagatatgattattgataaactgaacgagaattca
acaccagagaaaactgatgtgaccccttccaccacctctccaccttcatatgatagtgta
acaaaacctgaaaaggaaaaatatgaaaaagacaaaacggaaaaggaagacaaaggaaaa
gatgtcagggaaggcaaaaagtaa
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integrated database retrieval system
