KEGG   Antechinus flavipes (yellow-footed antechinus): 127561476
Entry
127561476         CDS       T08818                                 
Name
(RefSeq) collagen alpha-1(IX) chain
  KO
K08131  collagen type IX alpha
Organism
afz  Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04151  PI3K-Akt signaling pathway
afz04510  Focal adhesion
afz04512  ECM-receptor interaction
afz04820  Cytoskeleton in muscle cells
afz04974  Protein digestion and absorption
afz05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:afz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    127561476
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127561476
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127561476
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127561476
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    127561476
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    127561476
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:afz00535]
    127561476
Proteoglycans [BR:afz00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   127561476
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_3
Other DBs
NCBI-GeneID: 127561476
NCBI-ProteinID: XP_051852670
LinkDB
Position
4:complement(237645033..237771389)
AA seq 919 aa
MDSGWKIPLIFFICCFLGPWASATVQRYRRFPISLTPNPENDLCPQVRIGQDDLPGFDLI
SQFQVDKAASRGAIQRVTGSTSLQVAYKLGNNVDFRIPTRHLYPNGLPEEYSFLTTFRMT
GNTLKKNWSIWQIQNSMGKEQVGMKINGQTQSLAFSYKGVDGSLQTAAFSNTPILFDSQW
HKVMIGVERTSVTLFIDCKRIESLPIKPRGKIDVDGFAVLGKLIDNPQVSVPFELQWLLI
HCDPLRPRRETCHELPVRPSLSNGERGPPGPQGPPGPPGPPGVPGIDGIDGDRGPKGSPG
PPGPSGDPGKPGAPGLPGTPGADGLTGPDGSPGAVGPRGQKGEPGVPGSRGFPGRGIPGP
PGPPGASGLPGELGRVGPSGDPGRRGPPGPPGPPGPSGTIGLHDGDPLCPNSCPPGRSGY
PGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGITGIVGAKGD
KGARGLDGEPGPQGLPGAPGDQGQRGPLGETGPKGDRGVQGPRGINGLPGPKGENGLPGV
DGRDGIPGMPGSKGEPGKPGPPGDVGRQGLPGLPGSPGAKGVAGEKGNTGAPGVPGVMGN
SGKPGQQGPQGEVGPRGPRGLPGSRGELGPSGPPGSPGKLGPLGSPGLPGLPGPPGLPGL
KGDRGSVGEPGPKGEQGRAGEEGEAGGKGELGDIGLPGPKGSVGNPGEPGSRGPEGSRGL
PGVEGSRGPPGPRGMQGERGATGLPGIQGPAGRAPTDQHIKQVCLRVMQENLALMAASLK
RPDSGASGLPGRPGPPGPPGPPGENGFPGQMGPRGLPGLKGPPGELGLRGPKGDLGERGE
RGPPGRGPKGLPGSIGLPGDPGPASYGKEGRDGERGPPGPAGIPGVPGPPGPAGPPGFCE
PASCTVQAGQRAFSKGPDQ
NT seq 2760 nt   +upstreamnt  +downstreamnt
atggatagtggctggaaaattccacttatcttcttcatatgctgttttctgggaccttgg
gcatctgcaactgtccagcgttatcgaaggttccccatctccttgactcctaatcctgaa
aatgacctttgtccacaagtccggattggccaggatgacttaccaggatttgacttaatt
tctcagttccaagtagataaagcagcatctagaggagctattcagagagttacaggctca
acatcattacaagtggcttataaattaggaaataatgtagacttcaggatcccaaccaga
catttgtatcctaatggactacctgaagaatattcctttttaacaacttttcggatgact
ggaaacactctgaaaaagaactggagcatctggcagatacagaattccatggggaaagag
caagttggcatgaagattaatggccaaactcaatcccttgcattttcctataaaggagtg
gatggtagtcttcaaactgcagctttttcaaatactcctattttgtttgattcccaatgg
cataaagttatgattggtgtggaaaggacaagtgtcaccctctttattgactgcaaaagg
attgaatccttacccataaagccaaggggcaagattgatgtggatggttttgctgttcta
ggaaaactcatagacaatcctcaggtttctgttccgtttgaactccagtggttgctgatt
cattgtgaccctctgagacccagaagagaaacttgccatgaacttccagtccggccaagt
ctgagcaatggggagagaggtcccccgggtccccaagggcctcctggtcctcccggtccc
ccaggagttccgggcatcgatggtattgacggagatcgaggtccaaagggttccccaggt
cccccgggacccagtggagacccaggaaaaccaggagctccgggtttacccggtacacca
ggtgcagatggcttgacaggacctgatggatcacctggtgcagttggtccaagaggacaa
aaaggagagcctggagtcccaggatcacgtggatttccaggtcgtggtattcctggacca
ccgggacctcctggtgcatctggacttcctggagaacttggacgtgtgggaccatctggt
gatcctggaagaagaggaccacctggccctccaggtcccccaggaccaagtggaacaatt
ggacttcatgatggagatccactgtgtcccaattcctgtccacctggtcgttcgggatat
ccaggtctaccaggcatgaggggtcacaaaggagcaaagggagaaattggggaaccagga
agacaaggtcataagggagaagaaggtgatcagggagaacttggagaagtgggagctcaa
ggaccaccgggtcctcaaggcttaagaggaataaccggtatagttggggccaaaggagac
aaaggagctcgtggccttgatggtgaacctggcccccagggacttcctggtgcacctggt
gatcaagggcagagaggaccactaggagaaacaggccctaagggtgacagaggtgttcag
ggtcctagagggataaatggccttccaggtcccaaaggagagaatggtttgccaggagta
gatggtcgagatggaatccctggaatgcctggatcaaagggtgaacctgggaaacctggt
cctcctggtgatgtaggaaggcaggggcttcctggtttacctggaagtcctggtgcaaaa
ggtgttgctggtgaaaagggtaatacaggtgctcctggggtacctggtgttatgggaaat
tcaggcaaaccaggtcaacagggacctcaaggggaagttggaccaagaggaccccgggga
ctaccaggtagcagaggagaattaggacccagtggtcctccgggctcaccaggtaaactg
ggtccccttggcagcccaggccttccaggtctgcctggcccccctggactccctggattg
aaaggcgacaggggttcagttggtgagcctggtccaaaaggagaacaaggtcgtgctggt
gaagaaggtgaagcaggaggaaaaggagaactaggagatataggattgccgggcccaaag
ggatctgtgggtaatcctggagagcctggttcaagagggcctgaagggtcacgtggattg
ccgggagtggaaggatctagaggccctccgggaccacgaggcatgcaaggtgaacgaggt
gcaacaggtcttcctggtatccagggcccagccggtagagcaccaacggatcagcatatt
aagcaggtttgcctaagagttatgcaagagaatttagctttgatggctgctagcttgaag
agacctgactcaggtgcttctgggctaccaggaagacctggaccaccaggtccacctggt
cctcctggagagaatggttttccaggccagatgggaccccgtggcctcccaggtcttaaa
ggtcctcctggtgaacttggtttgagaggtcctaagggtgacttaggtgaaagaggtgag
agaggacctcctggaagaggacccaaaggcttaccaggatcaattggtcttccaggtgat
ccaggtccagcaagctatgggaaagagggacgggatggagagcgaggccctccaggtcct
gcaggaattcctggggtccctggccctccgggccctgctggtccccctggtttctgtgag
ccagcctcctgtacggtccaggctggccagcgtgctttcagcaaaggtccagatcagtga

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