Anopheles gambiae (malaria mosquito): 1280014
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Entry
1280014 CDS
T01036
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aga
Anopheles gambiae (malaria mosquito)
Pathway
aga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
1280014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aga03019
]
1280014
Messenger RNA biogenesis [BR:
aga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
1280014
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
1280014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
CNOT1_HEAT
DUF3819
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
1280014
NCBI-ProteinID:
XP_061514361
LinkDB
All DBs
Position
3:complement(24634007..24648165)
Genome browser
AA seq
2501 aa
AA seq
DB search
MNQEPFTYALSQIAHLVSNVNKKNSPATARQLAQLVKDFGLEADRHLLRCLFSSIDFGDA
THSAARGYCQARLLATELASLTNKPQLVANVCFAVDNPFPQQKSLKPTSNLLAQISKTLS
CTPIQETALSIALLHSEQPEIVRFAEAHLKNCLTELIETYIDSDSGSNNVEGSLNDVSPE
FLQQILSLISYGRHTALGLTDQTYERFRSQLCRDFPRDRVPLILAPLLYAESSEISAEIL
KLNTHSILQSSIMKTSWTNLVVEVGYSFTATLDDCRNHLLKVGGRDITPQDVAKIVSSMC
LTHESLSESSINLPTPSAFWPQGSGDPSGQKGKDGNGGSSASEVTTWKPEVLVQALKEVV
PALNWKEVCVALDHPEFLLKDRAGLSLLLTIVKMGMQASNMGQTFPVECLYQRWTNVEGQ
LSIISLILKNSDLYSFADHIYTSVSLDLLKTPPETDSKEVACWMSLHLVDVLLYIADHAN
LSEKVMKIFKVPGSLCPDVLFLALLQINPPMTTARQELFTNLVPIFLGNHPNAGTILHHA
WNHSTFNVTLRPIILHAMSDWYMVGEGDQSRLSRILDVAQDLKALSNLLNIRTYMFIIDL
ACLASRREYLKLEKWLADKIRDHGEPFVKTILKFLQRRCPQILGGKYSEEQIPKSSQLPP
ETLITILNCLQACIASCTPEVADMIHSMMQYGMLLNSKSRAQQQQQQQQAPQQQQQQPPP
PGVLRSHRGLEAFGANAMGSQLLPPMVDSLNSLTANIGGLSIGGPGGGNSAFSFNNIIAT
PPSPSRLLPSSSPFPMMPLPPGAAAAAQAGTLSRLQQTPNDKLGAAAAAGAAGIPTQALA
PFTADAPLPVSKEVEDEANSYFQRIYNLPPHPTLSIDEVLDMLQRYKDSPNRHENDVYQC
MLRNLFEEYKFFPQYPDKELQTTAQLFGGMVERNLVTTYVALGLALRCVLDALKKPEGTK
MYYFGITALDRFKNKLHLYPKYCEYVHSIAHFSEFPAHLIEYIEYGSQGQEPPNKTLGPG
PLPPSILQFMPSGAAGRGGPVGNPLYRSNSVTGTSNLTLAGVSTSASAAAAAAAAAAAAA
AAAGGAGVGTPGKINLSAQLIPPGAAGGGAAGASGGGGSGAGVAGSSGNSGGTGGSSGGG
QPPRVKSIANATNIDTLLVATQDREEKIIAPPDAIQDKTAFIFNNLSQINLQQKCEEIKE
ILQKDYYTWLAQYLVLKRASIEVNFHVLYSNFLDALKIPEINRLVTKETFRNIRVLLRSD
KGIANFSDRSLLKNLGHWLGMMTLGRNKPILHLDIDVKSLLVEAYNKGQQELLYVVPFVA
KVLESCAKSKVFKPPNPWTMSIMNVLAELHQEPDLKLNLKFEIEVLCKNLNIDVSDLKPA
IYLKDPERAQNIEYQLSQPKPPKETAAAAVMGGAGVAGLGVGGNVGGGGGGGGGGGVVAV
VPQLPPGAGPDDMGSSGPSSSPANVAMDPALAATGPPEPRFHYSDINIANPSLNAQHIVY
HPTVAILHTQTHLKVIVKSCLERTISEWISLIVDRSVKIASKTTEQIVRKDFALDSDETR
MRRSAHNMARSLVAGMAMITCRDQMVQTIQNNIKVAFAAAVGSAQKEAIIEHAAQQLAMD
NIELVTAFIQKTAIEKVAIEMDKILAEDFQLRKLARQEGRRYWDAAVLSYHAERMPERIK
LNVGGVSPSQLAVYEEFSRNIPGFLPITERDAAQFAPKMAEMLPFVATPDEIGAIYDELA
SKMDTFIKTTRLVPILQLHTNNMEQLLECLIHAHRSLDNLTGCTLLNKAVEGLLEGLINI
PDQIEHVKLYRDIHLRVMRLMQDHRLFGPMWTNKAITRYMLECREELRYNVEAVDLLITS
NFVNMQQFDMMLVQLMDNGNNYVAVVFAMQLLQTFFIDERHNSAITENDLAGTIEMLHRL
TAHPRAPEGLTHLIEMLRANHDPNSFLMDRAIVGPTSYIHAGVAQARSDIDDSPGFLERA
EFLLKDWVTIALSPNTCRDPLKGFSVFVGKMNAHGILKGDEPLTRFFRFATQYCIDLTYR
NMNEPNAKTKIFQFIDAYVRLIALLVKHSGESGSTNTKLNLLNKILGIIIGILLHDQEVH
TTAFQQVGYHRIFAMLFLELTTHDPILENISISVITAFCHTFHILRPSAAPGFCYSWLEL
IAHRVFIGRVLAQIPQQKGWHMYSQLLIDLFKYLAPFLRNAELAKPVQHLYKGTLRVLLV
LLHDFPEFLCDYHFAFCDVIPSNCIQMRNLILSPYPRNMRLPDPFTPNLKVDMLNDIGGS
PRISINYASSIQPVSFKKDLDSYLKARAPVTFLSELRSNLQISNEVGSRYNIPLMNALVL
YVGTQAIAHIRSKNLGPTMSTIIHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCCILYLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWDH
DFVHCAPEIERLFESVAKSCMVTSKSQQQIQNVEPDITECS
NT seq
7506 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagagcctttcacatacgccttatcgcagatcgctcacttagtgtcgaacgtg
aacaagaaaaactccccggccacagcacgtcagctagcgcagctggtgaaggacttcgga
ctagaggccgaccgtcacttgctgcgttgtctgttctcctcgatcgacttcggggacgcc
acacattccgccgccaggggttattgccaggctcgcttactggccacggaactcgcgagc
ctgacaaataaaccgcagctggtcgccaacgtttgcttcgccgtcgacaatccgttcccg
cagcaaaagtccctgaagccgacgtcgaacctgctggcacagatctcgaaaacgctctcc
tgtacaccgatccaggaaacggcgctttcgatcgctttgctgcactcggaacagccggag
atagtgcggtttgcggaagcgcaccttaagaactgtctcaccgagctaatcgagacctac
atcgactctgactcgggcagcaacaacgtagagggcagccttaacgacgtatcgcccgag
tttctgcagcagatactgtccctaatctcgtacggccggcacaccgccctcgggcttacc
gaccaaacgtacgaacgcttccggagccagctgtgccgcgactttccgcgcgaccgcgtg
ccgctcatcctagcgccgctgctgtacgcggagagttcggaaatttcggccgaaatattg
aagctcaacacgcacagcatcctgcaatcgtcgatcatgaaaacgtcctggaccaatctg
gtcgtggaggtgggctactcgttcaccgcgacgctcgacgactgccggaaccatctgctg
aaggtgggcgggcgcgacatcacaccgcaggatgtggcgaagattgtgtcgtccatgtgc
ctgacgcacgagtcgctgtcggagagtagcatcaatctgccgacgccgagcgccttctgg
ccgcagggcagtggcgatccgtccggccagaagggcaaggatggcaatggggggtcgtcc
gcgtcggaagtcaccacctggaagccggaggtgctggtgcaggcgctgaaggaggtagtg
cctgcccttaactggaaggaggtgtgcgtagcgctggaccatccggagtttctgctgaag
gaccgggccgggctgtcgctgctgctgacgatcgtgaagatgggcatgcaggcgagcaac
atgggccaaaccttcccggtggagtgtctgtatcagcggtggacgaacgtcgagggtcag
ctgtcgatcatttcgctgatactgaaaaactccgacctgtactcgttcgccgaccacatc
tacacgagcgtgtcgctcgatctgctgaagacgccgccggagacggacagcaaggaggtg
gcctgctggatgtcgctccacctggtggacgtgctgctgtacatcgcggaccatgcgaac
ctgagcgagaaggtgatgaagattttcaaggtgcccggttcgctctgcccagacgtgctg
tttctcgcgctgctgcagatcaacccgccgatgacgacggcccggcaggagctgttcacc
aatctggtgccgatcttcctcggcaaccatccgaacgcgggcacgatactgcaccacgcc
tggaaccattccacgttcaacgtgacgctgcgcccgatcatcctgcacgccatgtccgac
tggtacatggtcggggagggcgaccagtcgcggctgtcccgcatcctcgacgtggcgcag
gacctgaaggcgctgtccaatctgctcaacattcgcacgtacatgttcatcatcgatctg
gcctgtctggcgtcgcgccgcgagtacctcaagctggagaagtggctggcggacaagata
cgcgaccacggcgaaccgttcgtgaagacgatactgaagtttctgcagcgccgctgcccg
caaatcctgggcggcaagtacagcgaggagcagatcccgaagtcgtcccagctgccgccc
gaaacgctcatcaccatactgaactgtttgcaggcgtgcatcgcgagctgtacgccggag
gtggcggacatgatccacagcatgatgcagtacggtatgctgctgaactcgaagtcgcgc
gcccagcagcaacagcagcagcagcaggcgccccagcagcagcagcagcagccgccgccg
cccggcgtgctccggtcgcaccgcggtctggaagcgttcggtgccaatgcgatgggcagc
cagctgctacccccgatggtggactcgctcaacagcctgaccgcgaacattggcggcctt
agcatcggtggccccggcggcggcaacagcgcgttcagcttcaacaacatcattgcgacg
ccgccgtcgccctcgcgcctgctgccctcgagcagcccgttcccgatgatgccgctgccg
cccggtgcggccgccgctgcccaggccggcacgctcagccggctgcagcaaacgccgaac
gataagctcggggcggcggcggcagccggcgccgccggcattcccacccaggcgctcgcc
ccgttcacggccgacgcaccgctgcccgtctcgaaggaggtggaggacgaggcgaacagc
tacttccagcgcatctacaacctgccgccgcatccgacgctgtcgatcgacgaggtgctg
gacatgctgcagcgctacaaggactcgccgaaccggcacgagaacgacgtgtaccagtgc
atgctgcgcaacctgttcgaggagtacaagtttttcccccagtacccggacaaggagctg
cagacgacggcccagctgttcggcggcatggtggagcgcaatctcgtcaccacgtacgtg
gcgctcgggctggcgctgcgctgcgtgctcgatgcgctgaaaaagccggaaggcacgaag
atgtactacttcggcattaccgcgctggaccggttcaagaacaagctgcacctgtacccg
aagtactgcgagtatgtgcactcgatcgcgcactttagcgagtttccggcgcacctgatc
gagtacatcgagtacgggtcgcagggccaggagccgccgaacaaaacgctcggcccgggc
ccgctgccaccgtcgattttgcagttcatgccgagcggggcggccggtcggggtggaccg
gtgggtaatccgctgtaccggagcaactccgtcaccggcacgagcaatcttacgctggcc
ggtgtgtctacgtccgcttcggctgcggctgcagccgcagctgccgcagccgccgccgct
gctgctgccggtggtgccggtgtgggtacgcctggaaagattaatctttccgctcagcta
atccctcccggtgctgccggcggtggagcggcaggtgctagcggtggcggtgggtcgggt
gcaggtgttgccggctcaagcggtaacagtggtggcactggtggaagcagcggcggtgga
caaccgccgcgcgtcaaatcgattgcaaacgcaaccaacatcgacacgctgctggtggcg
acgcaggaccgggaggagaagatcattgcgccgccggacgccatccaggacaagacggcg
ttcatcttcaacaacctgagccagatcaatctgcagcagaagtgcgaggagatcaaggaa
atactgcagaaggattactacacctggctggcgcagtatctcgtgctgaagcgtgcctcg
atcgaggtgaacttccacgtgctgtactcgaactttctcgatgcgctcaagataccggaa
atcaaccggctggtgacgaaggaaacgttccgcaacatccgcgtgctgctgcggtcggac
aagggcattgcgaacttttccgaccgctcgctgctgaagaatctcggccactggctgggc
atgatgacgctcgggcgcaacaagccgatcctgcacctggacatcgacgtgaagtcgctg
ctggtggaggcgtacaacaagggccagcaggagctgctgtacgtcgtgccgttcgtggcg
aaggtgctggaatcgtgcgcgaagagcaaggtgttcaagccaccgaacccgtggacgatg
tcgatcatgaacgtgctggcggagctgcaccaggagccggacctgaagctgaacctgaag
ttcgaaattgaggtgctgtgcaagaacctcaacattgacgtcagcgacctgaagccggcc
atctatctgaaggacccggagcgggcgcaaaacatcgagtatcagctgtcgcagccgaaa
ccaccgaaggagacggccgccgcggcggtgatgggtggtgcgggcgtagccggactcggt
gtcgggggtaatgtgggcggcggtggtggaggtggtggtggcggcggtgttgttgccgtc
gtgccgcagcttcctcccggggccggcccggacgatatgggctcgagcggaccgtccagc
tcgccggcaaacgtggcgatggatccggcgctggcagcgaccggtccacccgaaccacgc
ttccactactccgacattaacattgcgaatccgagcctgaacgcgcagcacatcgtttac
catccgacggtggcgatcctgcacacccaaacgcacctgaaggtgatcgtgaagagctgc
ctggagcgcaccatctccgagtggatctcgctgatcgtggaccgcagcgtgaagattgcg
tccaaaacgaccgaacagatcgtgcgcaaggatttcgcgctcgactcggacgagacgcgg
atgcgccggtcggcccacaatatggcgcgcagtctggtggcgggcatggcgatgatcacg
tgccgcgaccagatggtgcagacgattcagaacaacatcaaggtggcgttcgcggccgcg
gtcggtagcgcgcagaaggaagcgatcattgagcacgccgcccagcagctggcgatggac
aacattgagctggtgaccgcgttcatccagaagacggccatcgagaaggtggcgatcgag
atggacaagatactggcggaggactttcagctgcgcaagctggcgcggcaggagggccgg
cgctactgggacgcggccgtactgtcgtaccatgcagaacggatgcccgaacgcatcaag
ctgaatgtgggcggcgtgtcgccgagccagctggcggtgtacgaggagttttcgcgcaac
attcccggcttcctgccgattacggagcgcgatgcggcccagtttgcccccaagatggcg
gagatgctgccattcgttgctacgccggacgagatcggtgcgatctacgatgagctggcg
agcaagatggatacgttcatcaaaacgacgcgtctcgtgccgatattgcagcttcacacc
aacaacatggagcagctgctggagtgtttgattcacgcgcaccgttcgctcgacaatctg
accggctgcacgctgctgaacaaggcggtcgagggcctgctggagggtttgatcaacatc
ccggaccagatcgagcacgtcaagctgtaccgggacatccatctgcgcgtgatgcgcctg
atgcaggaccatcggctgttcggtccgatgtggacgaacaaagcgatcacgcgctacatg
ctggagtgccgggaggagctgcgctacaacgtggaagcggtcgatctgctgattacgtcc
aactttgttaacatgcagcagtttgacatgatgctggtgcagctgatggacaatgggaac
aattacgtggcggtcgtgttcgccatgcagctgctgcagacgttcttcattgacgagcgg
cacaattcggccatcacggagaacgatctggccggcacgatcgagatgctgcaccggctg
acggcgcacccgcgcgcaccggaaggtttgacgcatttgatcgagatgctgcgcgccaat
cacgatccgaactcgttcctgatggatcgtgccatcgttgggccgacctcgtacatccac
gcgggtgtagcccaggcacggtcggacattgacgattcacccggttttctcgagcgggcc
gagttcctgctcaaggactgggtcacgattgcactgtcgcccaacacgtgccgcgatccg
ctcaagggtttcagcgtgtttgtgggcaagatgaacgcgcacggcatactgaagggtgat
gagccgctgacgcgcttcttccgcttcgccacgcagtactgcatcgatctgacgtatcgc
aacatgaacgagccgaacgcgaaaacgaaaatcttccaatttatcgacgcgtacgttcgc
ctgattgcgctgctggtaaagcactccggcgagagtggcagcaccaacacgaagctgaat
ctgctgaataagattctcggtatcatcatcggcatactgctgcacgatcaggaggtccac
acgaccgcgttccagcaggtcggctaccatcgcatcttcgccatgctcttcctcgagctg
accacgcacgatccgatcctggagaacatcagcatcagcgtgatcacggcgttctgccac
acgttccacatactgcgcccgtccgcggcgcccggcttctgctactcctggctcgagctg
atcgcgcaccgcgtcttcatcgggcgcgtgctcgcccagatcccgcagcagaagggctgg
cacatgtactcgcagctcctgatcgacctgttcaagtatctggccccgttcctgcgcaat
gccgagctggccaagccggtgcagcatctgtacaagggtacgctgcgcgtgctgctggtg
ctgctgcacgattttcccgagtttttgtgcgactaccatttcgcgttctgcgacgtcatc
ccgtcaaactgcatccagatgcgcaacctgatcctgtcgccgtacccgcgcaacatgcgc
ctgcccgatccgttcacgccgaacctgaaggtcgatatgctgaatgatattggaggatcg
ccacggatttccatcaactacgcgtcctccattcagccggtaagcttcaagaaggatctc
gactcgtacctgaaggcccgcgcaccggtcaccttcctgtcggagttgcgctccaatctg
cagatctcgaacgaggtcggctcgcgctacaatattccgctgatgaacgcgctggtgctg
tacgttggcacccaagcaattgctcatattcgatcgaaaaatttgggcccaacaatgtcc
acgatcatacacagcgcgcacatggatatcttccaaaacctggcggtcgatctggacacg
gagggacgctacctgttcctgaacgcgattgccaaccagctgcgctatccgaacagccac
acgcactacttcagctgctgcatactgtacctgttcgcagaggcaaattcggaagccatt
caggaacaaatcacgcgcgttttgctcgagcgcctgatcgtcaatcgtccgcatccgtgg
ggtctgctgatcacgttcatcgagctgatcaaaaatccgatctacaagttctgggatcac
gatttcgtgcactgtgcgccagaaattgaacgacttttcgaatcggtggcaaaatcgtgc
atggtcacgagcaagagccagcagcaaattcaaaacgttgagccggatatcaccgagtgc
agctaa
DBGET
integrated database retrieval system
