Agathobaculum sp. NTUH-O15-33: RWV98_03395
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Entry
RWV98_03395 CDS
T09495
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Pathway
agat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RWV98_03395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agat03021
]
RWV98_03395
03400 DNA repair and recombination proteins [BR:
agat03400
]
RWV98_03395
Enzymes [BR:
agat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RWV98_03395
Transcription machinery [BR:
agat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RWV98_03395
DNA repair and recombination proteins [BR:
agat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RWV98_03395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WNX85332
LinkDB
All DBs
Position
639372..640319
Genome browser
AA seq
315 aa
AA seq
DB search
MIEIEKPRIDCEQLAEDGSYGKFVVEPLERGYGTTLGNSLRRILLSSLPGTAASSIKIAG
VQHEFSTIPGVKEDVTEIVLNIKGIIAKLHCDGPKTVYIEAAGEGEVKAGDIHADGEVEI
LNPDLHIATLMSDARLSMEITLTSGRGYVPAEKNKQHQTSIGVIPVDSIYTPVYKVNYTV
ENTRVRDLTDYDKLTLEVWTDSTISARDAVSLGAKVLRDHLDLFVDLSEEIGSKSTVVEK
AEAQHDKVLEMTIEELDFSVRSFNCLKRAGINTVEDLINTSEEDMMKVRNLGRKSLEEVI
GKLEAMGLSLAKTDE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatcgaaaagccgcgcattgactgtgaacagctcgccgaggacggctcctac
ggtaaattcgttgttgagcctctcgaacgcggatacggcaccacgctgggcaattccctg
cgccgcatcctgctttcctccctgccgggcacggcagcgtcgagcatcaagatcgcaggc
gtacagcatgagttttccacgattccgggcgtgaaggaagacgttacggagatcgtgctg
aatattaagggcattatcgctaagctgcactgtgacgggcccaagacggtctatatcgag
gccgccggcgagggcgaagtcaaggctggcgacatccatgccgacggcgaggtcgagatt
ctcaatcccgatctgcacatcgccacgctcatgagcgacgcgcgcctgtccatggagatc
acgctgacttccggccgcggctatgttccggctgagaagaacaagcagcaccagacctcc
atcggcgtcattccggtggattcgatctatacgccggtctataaggtcaattacacggtg
gagaacacccgtgtgcgcgacctgaccgactacgataagctcacgctcgaggtttggacc
gactcgaccatctccgcgcgggacgctgtctcgctcggcgcaaaggtcctgcgcgaccac
ctcgacctgttcgtcgatctctctgaggagatcggttccaagtccactgttgtagaaaag
gctgaagcgcagcacgataaggtgcttgaaatgaccattgaggagcttgacttctccgtg
cgttcgttcaactgcctcaagcgcgccggcatcaacacggtggaggatctgatcaatacc
tcggaagaggacatgatgaaggtgcgcaacctcggccgcaagtcgctcgaggaggtcatc
ggcaagctggaggccatgggcctatcgctcgccaagaccgacgaataa
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