Astur gentilis (Northern goshawk): 126053387
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Entry
126053387 CDS
T08649
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
agen
Astur gentilis (Northern goshawk)
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
agen03037
]
126053387
Cilium and associated proteins [BR:
agen03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
126053387
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WDR55
WD40
TPR_IFT80_172
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
TPR_COPA_B
Beta-prop_WDR35_TULP_N
TPR_GEMI5
Beta-prop_DCAF12
WDR90_beta-prop_4th
Consortin_N
EIF3I
WD40_MABP1-WDR62_1st
RNase_HII
Clathrin
RLMM_N
Motif
Other DBs
NCBI-GeneID:
126053387
NCBI-ProteinID:
XP_049691526
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Position
33:993798..1084237
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AA seq
1486 aa
AA seq
DB search
MIWGLASRSPESLQSVTTSVVMAVYVDHRTEAPDSVASPSHIAWHPLHPLLAVASISTAS
GGCVDIYLEQGEHVSDAHVERNFQVTSLSWHPSRPILAAGWESGEVVILNKQDKEHHAVP
PNHNAKITALNWSTNGTSLVSGDRHGVLVLWRMDQRGRVQGPALLKQEYGKCLSRCVFRP
PPPGEDFVQLAKAAVSGDEKALDKFNWRKAGTGAPLKMGLQEGLSFFITLTDGSVHYVNE
KGKTRHVLSTDSLVQKLLFMEKRDVLLVITENLQLSLHAVTLEGEAEELMKVKLSGKTGH
SADIILIDHSLVVTALGETVIRFWDLDRDENYVLSPDVQFGFEGGECINCISYCSAKGLL
AAGTNKGRIAMWRKASGSNQSIRALEGKEKWKLQAPTELEGNVTQIKWGSRKNLLAVNNI
SSVVILSEQAISSHFHQQVAVVQVSPNLFNVTTFSTGTTHSLRVDMNVNGVFATKDAVAF
WNGKQVTVFECSGDSFRSAGSFLCDSPVLSVHGENLYTVEPYRVQVRTWQGTVKQLLVFS
EAEGNPCLLDVCGNFLAVGTDMAHFKIFDLSRREAKVHCNSKNFFELFPGLGGIASVKCN
ASGNKVSILVSKADGNIDSKICFYDVEMDKVTLFDFKAEQGNGREKLSSGQSIDKSVVQY
PELHSHIPACHFWDQSEPRLFVCEAILETGLQSPDQKKNQTESTMDVWIISFFSTEEHGL
LLQDSFPLPSSYQVLLGIEVPHYYFAKKLFFRRGCIYKPLGEAEKGQAESGSIKVSQMVV
RRPMRDFIGLGDCDKTTRDAMLNFSYYLTAGDMDEAFKSIKLIKSEAVWENMARMCVKTQ
RLDVAKICLGNMGHARGAKALREAEQEPEQEARVAVLAIQLGMLEDAERLYKACKRYDLL
NKFYQASNQWQKAIETAEAHDRVHLRTTYYNYAKHLEATGEQSLALTHYEKSDTHRFEVP
RMLSEDLQALENYVNKMKDKSLWKWWAQYLESQSDMESALKYYALAQDYFSLVRVHCFQG
NIQKAAEIANETGNWAASYHLARQYESQDDIKQAVHFYTRAQAFNNAIRLCKDNNLDDQL
MNLALLSSPEDMIEAACYYEEKGEQMDRAVMLYHKAGHFSKALELAFATQQFGALQLIAE
DLDDKSDPALLARCSDFFIEHAQYEKAMELLLTAKKYHEALQLCLKQNLTITEEMAEKMT
VCKDSKDLSEEAQRELLEQIADCCMRQGNYYLATKKYTQAGNKLKAMRALLKSGDTKKIV
FFAGVSREREIYIMAANYLQSLDWRKDPEIMKNIISFYTKGRALDLLAGFYDACAQVEID
EYQNYEKAQGALTEAYKCLSKAKTRSPLEEESKLARLQSKMTLIKRFIHARRVYSEDPKE
AVRQCELLLAEQDFDNAIRHGDVLGFLVEHYVQVQEFQMAYRYLEEMQKRIPPMNLSYYV
TPQTIEAVHRGVGIPISRTLVPEQTCHSSMENKEVEEEVADEVEDP
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgatttggggtctcgccagccggagccccgagagtttgcagtctgtgaccacttctgtt
gttatggctgtgtatgtggatcatagaacagaagctcctgattcagtggcctccccttct
catatagcatggcacccacttcatccactcctggcagttgcttctatcagcacagcatct
gggggctgtgtggatatctacctggaacagggagagcatgtgtccgatgcacatgttgag
agaaactttcaggtcacatcactttcctggcacccctctagaccgattcttgcagcaggc
tgggagtctggagaagttgtgatacttaacaaacaagataaggagcaccatgctgtacca
ccaaatcataatgcgaaaattacagccctaaactggagtacaaatggtaccagccttgtg
tctggtgacaggcatggtgtcttggttctatggagaatggaccagcgaggcagagtgcag
ggtcctgctctgctgaaacaagagtatggaaaatgtctgtctcgctgtgtctttcgacca
cctcctcctggcgaggactttgtacagctggcaaaagcagctgtgagtggtgatgagaag
gccttggataagtttaactggagaaaagctggaacaggagcacctctgaaaatgggactc
caggaaggactctccttctttattactttgacagatggttctgtgcattacgtgaatgag
aaaggaaagacaaggcatgtattatccacagacagtctggtccaaaagcttctgttcatg
gagaaaagagatgttttacttgtaataacagagaatctgcagttgtccttgcatgcggtt
actcttgagggagaggcagaagagctcatgaaggtgaagttgagtgggaagacgggtcat
tctgcagacatcattttaatagaccatagccttgttgttacagcactaggtgagacagtc
atcaggttctgggatttggaccgagatgagaactatgtactctccccagatgtgcaattt
ggctttgaaggaggagaatgtattaactgtatttcttactgcagtgctaaaggtctctta
gcagctggtaccaacaaagggagaatagctatgtggaggaaagcatcaggatccaatcag
agcatacgggctttggagggcaaggagaagtggaagctccaggcacctactgaacttgaa
ggaaatgtcactcagataaagtggggctcccgaaaaaacctgctggcagtgaacaacatc
agctctgtggtgatcctgagtgagcaggccatatcgtctcattttcatcagcaagtggct
gttgtacaggtgtctcccaacctgtttaacgtgaccaccttcagcacaggaaccacacac
agtcttcgtgttgatatgaatgttaatggagtcttcgctactaaggatgctgtagcattc
tggaatgggaagcaagttactgtctttgagtgctcaggagattccttcagaagtgcaggc
tcttttctttgtgactctccagttctgtctgtgcatggagaaaatctgtatacagttgag
ccgtatcgcgtccaggtccgcacctggcagggcacagttaaacagctgctggtgttttcc
gaagcagaggggaatccgtgcctcttggacgtctgcggaaatttcctggctgtgggaact
gatatggctcactttaaaatctttgatctctcccgcagagaggcaaaagtgcactgcaat
agcaagaatttcttcgagctgtttcctggccttggaggcatcgcatctgtcaagtgcaac
gctagtggcaataaagtcagcatccttgttagcaaggcagatgggaacattgattccaag
atctgtttctatgatgttgaaatggacaaagttacactttttgatttcaaggctgaacag
ggaaatggtagagagaagctttcttctggacaaagcattgacaagtctgttgtgcagtat
ccagagttgcacagccatatccctgcttgccatttctgggaccagagtgaaccaagactt
tttgtatgtgaagcaattcttgaaacaggcctacagtctccagaccagaagaaaaaccag
actgagagcacaatggatgtttggattatatcgttcttcagtactgaagagcatggcctt
ttgcttcaggacagttttccattgccttcatcctaccaggttcttctgggcatagaggtg
ccacattattactttgcaaaaaagttgttttttcggaggggatgtatctataaacctctg
ggagaagctgagaaaggacaagcagagtctggctcaataaaggtgtctcagatggttgtg
agaagacccatgagagatttcattggattaggagactgtgataagactacccgggatgcc
atgctgaacttcagctactatctgactgctggagacatggatgaggccttcaaatccatc
aagctgataaaaagtgaggctgtctgggagaacatggctcgcatgtgcgtgaagactcag
aggctcgatgttgccaaaatttgccttggaaacatgggtcatgcaagaggagccaaggca
ttgagggaggctgaacaagaaccagagcaggaggccagagtggcggtgctggccattcag
ctgggcatgctggaagatgcggagcgactctacaaggcttgcaaacgttacgacctcctg
aacaagttctatcaagcctcaaaccagtggcagaaagccattgaaacagctgaagctcac
gatcgggttcacttacgcaccacgtattacaactatgctaagcatctggaggcaactgga
gagcagagtcttgcactcacccactatgagaagtcagacacacataggtttgaggtaccc
cgcatgctctctgaagacttacaagccctggagaactatgtcaacaagatgaaagacaag
agcctatggaaatggtgggcacagtatctggaaagccaatccgatatggaatctgcacta
aaatactatgcgctggctcaggattatttttccctagtccgtgtccactgctttcagggc
aacattcagaaggctgctgaaatagcaaatgaaacggggaattgggcagcatcatatcac
ttggcccggcagtatgagagtcaggatgacatcaagcaggctgtacatttctacaccagg
gcccaggcatttaacaatgccatccgtttgtgtaaggataacaatttagatgatcagctg
atgaacctggctcttctcagctctccagaagacatgatagaggcagcctgctattatgag
gaaaagggggagcaaatggacagagctgtcatgttatatcacaaggcaggacatttctcc
aaagcactggagcttgcctttgccacgcagcagtttggggccctacagctaattgctgaa
gacctggatgataaatcagacccagctctgctagcccgctgttctgatttttttattgaa
catgctcagtatgagaaggcaatggagttgctgctaacagccaaaaagtaccatgaagct
ctgcaactttgcctgaagcaaaacctgaccattacggaggagatggctgagaagatgact
gtctgtaaggactccaaggacctctctgaggaggcccagagagagctgttggagcaaatc
gctgattgctgcatgagacaaggcaattactacttggcaaccaagaaatacacgcaagca
ggaaacaagttaaaggctatgagggcactgctgaaatctggagataccaagaaaattgtc
ttctttgcgggagtttccagagagagagagatttatatcatggcagccaactatctacaa
tcactggattggcggaaggaccccgagattatgaagaacatcattagcttctatactaaa
ggaagggcccttgacctgctcgcaggtttctacgatgcatgtgctcaggtagaaattgat
gagtatcagaactatgagaaagcacaaggagcactgacagaagcgtataagtgcctttca
aaagcaaagactagaagccctctggaagaggaaagcaaactagcacgtttgcaaagcaag
atgaccttgattaagcgattcatccatgctcggagagtttactctgaagatcccaaggag
gcagtcaggcagtgtgaacttctccttgctgaacaagattttgacaacgccatccgtcac
ggtgatgtcttgggatttctggttgaacattatgtacaagtgcaggaattccaaatggct
taccggtatctggaagagatgcagaaaagaattccacctatgaacctgagctactacgtg
actccacagaccattgaggcagttcaccgaggagtaggcattcccataagccgaaccctg
gttccagaacaaacgtgccacagcagtatggagaacaaagaggtggaagaagaagtggct
gatgaagtggaggacccctga
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