KEGG   Arachidicoccus ginsenosidivorans: FSB73_10005
Entry
FSB73_10005       CDS       T06150                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
agi  Arachidicoccus ginsenosidivorans
Pathway
agi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:agi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FSB73_10005 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:agi03019]
    FSB73_10005 (rny)
Messenger RNA biogenesis [BR:agi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FSB73_10005 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B
Other DBs
NCBI-ProteinID: QEC71950
UniProt: A0A5B8VKC3
LinkDB
Position
2504553..2506121
AA seq 522 aa
MTSELIFEAIVAIVGVVVGIIAGKFIFAKDNRRQLEEAEEKAKGIVKEAHLRSETIKKEK
QLEAKEKFVQLKAEHDKEILERNKKIGDIENKIKQKENSINQKENALDRQIKENNVIKDN
LNKQIEVVNLKRTELEKHQEEHIRRLEKISNLSSEEAKAQLIENLKSEARTQALGLQQDI
IEEAKQKANKEARKIIIQSIQRTAAEQTIENTVTVFNLETDEVKGQIIGREGRNIRAIEA
ATGVDLIVDDTPEAVILSSFDPLRREIARLSLQRLVSDGRIHPARIEEVVEKTRRQLEEQ
IMEIGERTIIELGIHGLHKELVRIVGKMRFRSSYGQNLLMHSRETANLCGIMASELGLNP
KLAKRAGLLHDIGKVPDEETELSHALYGAKMAEKYGENPAVVNAIGAHHDEMEMLYVISP
IVQACDAISGARPGARREIMQQYIQRIKDLESLAQGYTGVEKAYAIQAGRELRVIVEADK
VTDDDSNKLSFEIAQKIQTEMTYPGQIKVTVIREKRAVNVAR
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgacgtcggaattgatatttgaggctatcgttgccattgttggcgtggtagtgggtatt
atagcgggaaaattcatttttgccaaggacaaccgcagacaattggaggaagcagaagaa
aaagccaagggcattgttaaagaggcacatctgcgttcagaaaccattaaaaaagaaaaa
caacttgaggcaaaagaaaaatttgttcaactaaaagcagaacacgataaagaaattctg
gaaagaaataaaaagatcggagatattgaaaataagatcaagcagaaggaaaactcaatt
aaccagaaggaaaatgcattagatcgtcaaatcaaagaaaataatgtcatcaaggacaat
ctgaataaacagattgaggtggttaacctgaaaagaacggaactggaaaaacaccaggaa
gaacatatccgtcggctggaaaagatctccaatctttcctcagaggaagctaaagcgcaa
ctcattgagaatctgaaaagtgaggccagaactcaggctttaggcttacagcaggatatt
atagaagaagccaagcagaaggccaataaagaagcccgtaaaattattattcagtccatt
cagcggacggctgcagagcagactattgaaaataccgtcaccgtatttaatctggaaacc
gatgaggtgaaaggccagattattggtcgggaaggccgtaacatccgggccattgaagct
gcgacaggtgttgacctgatcgtagatgataccccggaagcagtgattctttccagtttt
gatcccctgcgtagagagattgcccgtctttccttacagcgactggtatctgatggtcgt
atccatccggccagaatcgaagaggtggttgaaaaaacgcgccggcagctggaagagcaa
attatggaaatcggtgagcggacgattatcgaactcggcatccacggtttacataaagaa
ctggtcagaatcgtagggaaaatgcgattcaggtcttcctacgggcagaacttgctgatg
cacagtagagaaacagccaatctttgtggtatcatggcctcagaattaggcctgaatcct
aaactggccaaaagagcagggcttttacatgatattggtaaagtacccgatgaagaaacc
gaattaagccatgccctttatggagcaaagatggcagagaaatatggagagaatccagct
gtggtaaatgccattggcgctcaccacgatgaaatggaaatgctgtatgtgatttctcct
attgtccaggcttgtgatgccatcagtggggcaagaccaggagcgcgtcgcgagatcatg
caacaatacattcagcgcatcaaggacttggaatcgctggcccaagggtataccggtgtc
gagaaagcttatgctattcaggcgggtcgcgaactccgtgttattgtggaagcagataag
gtaactgatgatgactccaataaactcagttttgagattgcccagaagatacagactgaa
atgacctatcccggccagatcaaagtaaccgttatccgggagaaaagagcggtgaatgtg
gccagatag

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