Aphidius gifuensis: 122858003
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Entry
122858003 CDS
T07796
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
agif
Aphidius gifuensis
Pathway
agif03022
Basal transcription factors
agif03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122858003
09124 Replication and repair
03420 Nucleotide excision repair
122858003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agif03021
]
122858003
03400 DNA repair and recombination proteins [BR:
agif03400
]
122858003
Transcription machinery [BR:
agif03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122858003
DNA repair and recombination proteins [BR:
agif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122858003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
122858003
NCBI-ProteinID:
XP_044016533
LinkDB
All DBs
Position
LG5:17224037..17226187
Genome browser
AA seq
469 aa
AA seq
DB search
MTSSQSTSGPNLLRSTGLKCKDLHEYLKSRSPELLTELYQNPPICLAVFRELPAHARHYV
MRLLFIDQSVPTAVVESWCSKLDSEEHRRVIKILCELNIFKESRVPGGLPTWTLNLTFKK
NLKIVLLGGGKPWTMSNQLDTDSKPRDVAFLDSYAIERWECVLHYMVGSKQQEGISADAV
RILLHAGLMNRDEEDGSPIITQAGFQFLLLDTASQVWYFILQYLDTIEARGLNLVECLTF
LFQLNFSTLGKDYSTEGMTDGLLVFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNK
PITRDIEKDGYIVVETNYRVYAYTNSDLQVALLGLFCEIMYRFPNLVVSILTRDSVRQAL
RSGITAAQIVGYLNQHAHSKMIDNGPPTLPPTIVDQIKLWENERNRFTFTGGVLYNTFLS
NTEYEVLRDHAQSTNVLIWHNDKTRTVVVSKDSHDDVKKFWKRYSKGSS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttcacaatcaacaagtggaccaaatttattacgttcaactggtttaaaatgt
aaagatttacatgaatatttaaaatcaagatcaccagaattattaacagaactttatcaa
aatccaccaatatgtcttgctgtatttcgtgaattaccagctcatgctagacactatgtt
atgagattgttatttattgatcaatcagtacctacagctgttgttgaatcatggtgttca
aaacttgattctgaagagcacagaagagtcattaaaatattatgtgaattaaatatattt
aaagaatcacgggtacctggtggtttacctacttggacattaaatttaacatttaaaaaa
aatcttaaaattgtattacttggtggtggtaaaccatggacaatgtcaaatcaacttgac
actgatagtaaaccaagagatgttgcatttttagattcatatgccattgaaagatgggaa
tgtgtattgcattacatggttggatcaaaacaacaagaaggaatatctgctgatgctgtg
agaatattgcttcatgctggtttaatgaatcgtgatgaagaagatggtagtccaattata
acacaagctggatttcaatttcttcttctagacactgcatcacaggtttggtattttata
cttcaatatttggatacaattgaagcaagaggattaaatctcgttgaatgtttaacattt
ttatttcaactaaatttttcaacacttggaaaagattacagtactgaaggtatgacagat
ggtttgctagtatttttacaacatctcagagaatttggtcttgtttatcagcgtaaaaga
aaagctggaagattttatccaactcgtttggctttgaatattgcaactggacaaaataaa
ccaataacaagagatattgaaaaagatggatatattgttgttgaaacaaattatcgagtg
tatgcttatacaaattcagatcttcaagttgctttgcttggtttattctgcgaaataatg
tacagatttccaaatttagtagtatcaattttaactcgtgactcagtacgtcaagctctg
agaagtggtataactgctgcacaaattgttggttatttaaatcaacatgcacatagtaaa
atgattgacaatggtccaccaacactaccaccaacaattgtcgatcaaataaaattatgg
gaaaatgaaagaaatagatttacatttactggtggtgttttgtataatacttttttgtca
aatactgaatacgaagtattacgtgatcatgcacaatcaacaaatgttctaatttggcac
aatgacaaaactcgtacagttgtcgtatcaaaagatagtcatgatgatgttaaaaaattt
tggaaacgttactcaaagggttcaagttaa
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