Alnus glutinosa (common alder): 133873907
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Entry
133873907 CDS
T10577
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu00040
Pentose and glucuronate interconversions
aglu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133873907
Enzymes [BR:
aglu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
133873907
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
133873907
NCBI-ProteinID:
XP_062167693
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Position
7:20295287..20299528
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AA seq
477 aa
AA seq
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MLQRTCIVLISLFCSFSPLGRAVLNLTLPGQHPDPEAVVQEIHRKVNASLARREMLQVSQ
KDQSPCLTGNPIDDCWKCDPEWANNRQRLADCAIGFGQYALGGKNGEFYIVTDSSDDDAV
NPKPGTLRYAVIQTEPLWIVFPSNMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITLQY
ITNVIIHNIHIHHCHPSGDTNVRSSPTHYGYRTKSDGDGISIFGSRDIWVDHCSLSHCRD
GLIDAVMGSTGITISNNYFSHHDEVMLLGHSDEYLPDSGMQVTIAFNHFGEKLVQRMPRC
RRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPIDRNAKEVTKRVETAEEKWRGW
NWRSEGDIMVNGAFFVASGEGVEVKYEKAYSVEPKSVVLIDQIVMHAGVLGVGGRDNNLG
MWSTGPNVGGTGFGSGPDYTDDMWGSSLPLSPSTSTTLLSLLIAFSCLLFYKITLML
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaaggacctgcattgtcttgatctctcttttctgctcattttctccacttggt
agagcggttctcaacctcactcttcccggccagcatcccgacccggaagcagttgtccaa
gaaattcacaggaaggtaaatgcgtctttagcgagaagggaaatgctacaagtctcccag
aaagaccagtctccatgcctaaccggaaaccccatagacgactgctggaaatgtgaccca
gaatgggcgaacaaccggcagagactagcagattgcgctattgggttcggccagtacgct
cttggcggcaagaatggcgaattctatatagtcaccgactcctcagacgacgacgctgtg
aatcctaagcctggcacgctacgatatgctgtgattcagactgagcctctctggattgtg
ttccccagcaacatgctcatcaagctctctcaggagctcatctttaacagctacaagact
ctcgatgggcgtggggctaacgtccacattgtcggcggcggctgcattactctgcaatat
ataaccaatgtcattattcacaacatacatatccaccattgtcatccgtcaggggatact
aatgtgcggtcgagcccaacccactacgggtatcgcacgaaatcggacggtgatgggatc
tccatattcgggtctcgagacatatgggtggaccattgttccctatcgcactgcagggac
ggcctgattgacgcggtgatggggtcgaccgggatcacgatatcgaacaactatttctcg
catcacgatgaggtgatgttgctgggccacagcgacgagtacttgccggactcggggatg
caggtgaccatagccttcaatcacttcggcgagaagctggtccagaggatgcccaggtgc
cgacgtggctatatccacgtcgtcaacaacgacttcacgcagtgggagatgtatgctatt
ggtggtagcggtaaccctaccattaatagccaagggaaccgctacaccgcccccattgat
cgcaatgccaaggaggtgacgaagagggtggagacagcagaagaaaaatggaggggatgg
aactggaggtcggagggggatataatggtgaacggagcattctttgtggcgtccggtgag
ggtgtagaggtcaagtacgagaaggcttatagcgtggagcccaaatccgttgtgctcatc
gaccagatcgtcatgcacgctggtgttctcggagttggtggcagggacaacaacctggga
atgtggagcacaggacccaatgttggtggaacgggtttcgggtcaggcccagactacacg
gatgatatgtgggggagcagcttgccactgtcgccttctacctctactactctcctatcc
cttttgattgcattctcatgcttgttattttataaaataaccctcatgttatga
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